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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006593
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We have found 39 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.532s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0041159.1
n.a. PREDICTED: probable transmembrane ascorbate ferrireductase 3-like [Cicer arietinum] gi|502168355|ref|XP_004514369.1| chr0 13485762 13491000 -
4 domain predictions
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Lj0g3v0264389.1
n.a. PREDICTED: probable transmembrane ascorbate ferrireductase 2-like [Glycine max] gi|356573901|ref|XP_003555094.1| chr0 137054815 137056396 -
4 domain predictions
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Lj0g3v0288899.1
n.a. Auxin-responsive family protein [Theobroma cacao] gi|508781646|gb|EOY28902.1| chr0 150086323 150086811 -
2 domain predictions
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Lj1g3v5034790.1
n.a. Cytochrome b561/ferric reductase transmembrane with DOMON related domain [Arabidopsis thaliana] gi|15233202|ref|NP_191734.1| chr1 61541287 61544868 -
4 domain predictions
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Lj2g3v1172590.1
n.a. PREDICTED: probable transmembrane ascorbate ferrireductase 4-like [Glycine max] gi|356496004|ref|XP_003516860.1| chr2 18636023 18638630 -
4 domain predictions
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Lj2g3v3188420.1
n.a. Dopamine beta-monooxygenase [Medicago truncatula] gi|357494649|ref|XP_003617613.1| chr2 40970342 40972980 -
4 domain predictions
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Lj2g3v3339020.1
n.a. Auxin-induced in root cultures protein [Medicago truncatula] gi|357495381|ref|XP_003617979.1| chr2 42555028 42556571 -
4 domain predictions
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Lj3g3v2390800.1
n.a. Ferric-chelate reductase [Medicago truncatula] gi|358346379|ref|XP_003637246.1| chr3 29770863 29783723 +
4 domain predictions
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Lj4g3v0119950.1
n.a. PREDICTED: auxin-induced in root cultures protein 12-like [Glycine max] gi|356532614|ref|XP_003534866.1| chr4 1146242 1148775 +
4 domain predictions
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Lj4g3v0258610.1
n.a. Cytochrome B561-related protein [Medicago truncatula] gi|357476429|ref|XP_003608500.1| chr4 3167807 3169755 +
4 domain predictions
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Lj4g3v0258610.2
n.a. Cytochrome B561-related protein [Medicago truncatula] gi|357476429|ref|XP_003608500.1| chr4 3167807 3169755 +
4 domain predictions
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Lj4g3v0282220.1
n.a. Auxin-induced in root cultures protein [Medicago truncatula] gi|357504947|ref|XP_003622762.1| chr4 3379093 3381452 +
4 domain predictions
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Lj4g3v2409490.1
n.a. Cytochrome b reductase [Medicago truncatula] gi|358349463|ref|XP_003638756.1| chr4 33453771 33455864 +
4 domain predictions
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Lj4g3v2716980.1
n.a. DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein [Theobroma cacao] gi|508721534|gb|EOY13431.1| chr4 36513301 36516793 -
4 domain predictions
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Lj5g3v2013830.1
n.a. PREDICTED: transmembrane ascorbate ferrireductase 1-like isoform X1 [Cicer arietinum] gi|502119311|ref|XP_004496575.1| chr5 28378108 28381150 +
4 domain predictions
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Lj6g3v0775970.1
n.a. Auxin-responsive family protein [Theobroma cacao] gi|508781646|gb|EOY28902.1| chr6 7384494 7385940 +
3 domain predictions
 –
Lj6g3v0927430.1
n.a. cytochrome B561-related protein [Beta vulgaris] gi|99646732|emb|CAK22421.1| chr6 10068951 10072605 -
4 domain predictions
 –
Lj6g3v1753240.1
n.a. PREDICTED: auxin-induced in root cultures protein 12-like [Glycine max] gi|356532614|ref|XP_003534866.1| chr6 19766773 19768488 +
4 domain predictions
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Lj6g3v1946490.1
n.a. DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein [Theobroma cacao] gi|508721534|gb|EOY13431.1| chr6 22274798 22278348 -
4 domain predictions
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LotjaGi1g1v0007600.1
n.a. Cytochrome b561 and domon domain-containing protein; TAIR: AT2G04850.1 Auxin-responsive family protein; Swiss-Prot: sp|Q9SJ74|B561G_ARATH Cytochrome b561 and DOMON domain-containing protein At2g04850; TrEMBL-Plants: tr|I3S8L2|I3S8L2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0007600 LjG1.1_chr1 1038479 1040344 +
4 domain predictions
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LotjaGi1g1v0026100.1
n.a. Cytochrome b561 and domon domain-containing protein; TAIR: AT4G12980.1 Auxin-responsive family protein; Swiss-Prot: sp|Q9SV71|B561O_ARATH Cytochrome b561 and DOMON domain-containing protein At4g12980; TrEMBL-Plants: tr|A0A151U2B5|A0A151U2B5_CAJCA Ferric-chelate reductase 1; Found in the gene: LotjaGi1g1v0026100 LjG1.1_chr1 3164506 3167301 +
4 domain predictions
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LotjaGi1g1v0043700.1
n.a. Cytochrome b561 domain-containing protein; TAIR: AT2G30890.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|O80854|B561L_ARATH Cytochrome b561 domain-containing protein At2g30890; TrEMBL-Plants: tr|V7BJS7|V7BJS7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0043700 LjG1.1_chr1 5940090 5942819 -
3 domain predictions
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LotjaGi1g1v0593800.1
n.a. Cytochrome b561 and DOMON domain-containing protein; TAIR: AT3G25290.1 Auxin-responsive family protein; Swiss-Prot: sp|Q9LSE7|B561C_ARATH Cytochrome b561 and DOMON domain-containing protein At3g25290; TrEMBL-Plants: tr|I1N1W5|I1N1W5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0593800 LjG1.1_chr1 113380474 113382975 +
4 domain predictions
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LotjaGi1g1v0792400.1
n.a. Cytochrome b561 and domon domain-containing protein; TAIR: AT3G61750.1 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein; Swiss-Prot: sp|Q9M363|B561I_ARATH Cytochrome b561 and DOMON domain-containing protein At3g61750; TrEMBL-Plants: tr|A0A0B2RSM9|A0A0B2RSM9_GLYSO Putative ferric-chelate reductase 1; Found in the gene: LotjaGi1g1v0792400 LjG1.1_chr1 136416402 136420125 -
4 domain predictions
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LotjaGi2g1v0005400.1
n.a. Cytochrome B561 family protein; TAIR: AT1G14730.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q67ZF6|ACFR3_ARATH Probable transmembrane ascorbate ferrireductase 3; TrEMBL-Plants: tr|A0A151RH42|A0A151RH42_CAJCA Cytochrome b reductase 1; Found in the gene: LotjaGi2g1v0005400 LjG1.1_chr2 1868056 1873475 +
4 domain predictions
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LotjaGi2g1v0055900.1
n.a. Cytochrome B561, putative; TAIR: AT5G38630.1 cytochrome B561-1; Swiss-Prot: sp|Q9SWS1|ACFR2_ARATH Probable transmembrane ascorbate ferrireductase 2; TrEMBL-Plants: tr|A0A0R4J5Z6|A0A0R4J5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0055900 LjG1.1_chr2 11332577 11338411 -
4 domain predictions
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LotjaGi2g1v0282500.1
n.a. Cytochrome b561; TAIR: AT1G26100.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q9C540|ACFR4_ARATH Probable transmembrane ascorbate ferrireductase 4; TrEMBL-Plants: tr|I3SU65|I3SU65_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0282500 LjG1.1_chr2 75495928 75498518 -
4 domain predictions
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LotjaGi3g1v0391400.1
n.a. Cytochrome b561 and DOMON domain-containing protein; TAIR: AT3G07570.1 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein; Swiss-Prot: sp|Q0WRW8|B561K_ARATH Cytochrome b561 and DOMON domain-containing protein At3g07570; TrEMBL-Plants: tr|V7ANQ8|V7ANQ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0391400 LjG1.1_chr3 78951006 78962310 +
4 domain predictions
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LotjaGi4g1v0008100.1
n.a. Cytochrome b561 and DOMON domain-containing protein; TAIR: AT5G47530.1 Auxin-responsive family protein; Swiss-Prot: sp|Q9FGK4|B561J_ARATH Cytochrome b561 and DOMON domain-containing protein At5g47530; TrEMBL-Plants: tr|A0A151SU37|A0A151SU37_CAJCA Auxin-induced in root cultures protein 12; Found in the gene: LotjaGi4g1v0008100 LjG1.1_chr4 1111660 1118175 +
4 domain predictions
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LotjaGi4g1v0023000.1
n.a. Cytochrome b561 domain-containing protein; TAIR: AT4G18260.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q0WPS2|B561M_ARATH Cytochrome b561 domain-containing protein At4g18260; TrEMBL-Plants: tr|A0A097PHP3|A0A097PHP3_MEDTR Cytochrome B561-like protein; Found in the gene: LotjaGi4g1v0023000 LjG1.1_chr4 2867750 2870585 +
4 domain predictions
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LotjaGi4g1v0023000.2
n.a. Cytochrome b561 domain-containing protein; TAIR: AT4G18260.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q0WPS2|B561M_ARATH Cytochrome b561 domain-containing protein At4g18260; TrEMBL-Plants: tr|V7CNV4|V7CNV4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0023000 LjG1.1_chr4 2867951 2870675 +
4 domain predictions
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LotjaGi4g1v0357800.1
n.a. Cytochrome B561 family protein; TAIR: AT1G14730.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q67ZF6|ACFR3_ARATH Probable transmembrane ascorbate ferrireductase 3; TrEMBL-Plants: tr|I3S4N6|I3S4N6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0357800 LjG1.1_chr4 73653509 73655492 +
4 domain predictions
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LotjaGi4g1v0391000.1
n.a. Cytochrome b561 and DOMON domain-containing protein; TAIR: AT5G54830.1 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; Swiss-Prot: sp|Q9FFU6|B561A_ARATH Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830; TrEMBL-Plants: tr|K7L6C8|K7L6C8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0391000 LjG1.1_chr4 76960654 76964029 -
4 domain predictions
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LotjaGi5g1v0301400.1
n.a. Cytochrome b561; TAIR: AT4G25570.2 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q8L856|ACFR1_ARATH Transmembrane ascorbate ferrireductase 1; TrEMBL-Plants: tr|B7FIG9|B7FIG9_MEDTR Transmembrane ascorbate ferrireductase; Found in the gene: LotjaGi5g1v0301400 LjG1.1_chr5 61853966 61857695 +
4 domain predictions
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LotjaGi6g1v0173700.1
n.a. Cytochrome b561 domain-containing protein; TAIR: AT4G18260.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q0WPS2|B561M_ARATH Cytochrome b561 domain-containing protein At4g18260; TrEMBL-Plants: tr|K7L9Z4|K7L9Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0173700 LjG1.1_chr6 46279394 46282996 -
3 domain predictions
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LotjaGi6g1v0173700.2
n.a. Cytochrome b561 domain-containing protein; TAIR: AT4G18260.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q0WPS2|B561M_ARATH Cytochrome b561 domain-containing protein At4g18260; TrEMBL-Plants: tr|V7BJS7|V7BJS7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0173700 LjG1.1_chr6 46279394 46283030 -
4 domain predictions
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LotjaGi6g1v0285900.1
n.a. Cytochrome b561 and domon domain-containing protein; TAIR: AT4G17280.1 Auxin-responsive family protein; Swiss-Prot: sp|Q8VYH6|B651B_ARATH Cytochrome b561 and DOMON domain-containing protein At4g17280; TrEMBL-Plants: tr|I1L009|I1L009_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0285900 LjG1.1_chr6 60338465 60341214 +
4 domain predictions
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LotjaGi6g1v0311800.1
n.a. Cytochrome b561 and domon domain-containing protein; TAIR: AT5G54830.1 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; Swiss-Prot: sp|Q9FFU6|B561A_ARATH Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830; TrEMBL-Plants: tr|G7IP50|G7IP50_MEDTR Dopamine beta-monooxygenase, putative; Found in the gene: LotjaGi6g1v0311800 LjG1.1_chr6 63039565 63046678 -
4 domain predictions
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LotjaGi6g1v0311800.2
n.a. Cytochrome b561 and domon domain-containing protein; TAIR: AT5G54830.1 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; Swiss-Prot: sp|Q9FFU6|B561A_ARATH Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830; TrEMBL-Plants: tr|G7IP50|G7IP50_MEDTR Dopamine beta-monooxygenase, putative; Found in the gene: LotjaGi6g1v0311800 LjG1.1_chr6 63041205 63046697 -
4 domain predictions
 –