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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0063200 |
| Transcript ID | LotjaGi2g1v0063200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA pyrophosphohydrolase; TAIR: AT1G30110.1 nudix hydrolase homolog 25; Swiss-Prot: sp|Q9C6Z2|NUD25_ARATH Nudix hydrolase 25; TrEMBL-Plants: tr|I3T716|I3T716_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0063200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:14662690..14668617) extracted from Lotus japonicus Gifu genome v1.2.
AGGAGAGAGAAAAATGGAAAGAATAATAATATTGCATTGCAATATTGCAGAGTGGTAGTGCGTAGCAGGCAGCGTAAAAC TCCAGCCTCACCCTCCCGTGTCTCTGACTCAACGCTCCCTGTTTTGTCAATTGTCATAGTCAGCGTGCGTCACTCATTCC CAAACACCAAATCCTCATCGCCCACACAACTCCACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT TTTTTTCTTTTCCATCGAGATTCTCTTCTCTCTTACCTACAACACTCACTGTTATTTTCCCTGTCAAACCAAACAAAACA AAAAGATTCAATTCTTCTCCCTTGTTCTTAACCTCATGGAGGGTCTTCCTCAAGGTTACCGCCCCAACGTTGGTGTCTGT CTCATCAACTCTAATGATCAGGTTAATTTCTCTTATTTTCTATCTCTTATATGTCTTGCTCAACTCATAATATTATTAAG AATCTTGAGCTTTTGTTAAAACTGCCAAATATTAATGTAGTAGTGTCTTGTCTTCAGTCTTTACGTTTTCTTTTTCTGAT TGCTTGCTAATTTTGGGTGATCATTTAATTATGTTTCTTGATCTTATTCTGGTGTGGCTTCTTTTATTGTTTTGTAAAGT TGCATAATTTTTAACGGCTTTAAGAACAGCTGATTTTTCCCCATTTACTTATTTTAAATTAATTCGATGGTTAAGATTTA TTCATCCTTTATTGTGATTTTTACCCTCTATTTTTTTTTTGTTTTTTTGTTTTCTCTTCTTTTTTGCTCAGTTGATAAGG ATCTCGGTTTTGGTTTGTGATTATTTGTTTCTTAACTATATTTATTATGTGTGTTTGGGGGTTTGTGGTTTGGTTACTTT AAATCTTTAATTTATGTATTCTTGATCTTATACGCCAAAAGTTTAGGTGAGGTGCTTTTTTCCTTTTGTGGGTATTGACT TCTATTATAGTAGCATCGTTTTTAACGGCTAAATAGGAGGAAACATGACTCTCTTTTATTTTTCTCTAAATTTTTAGTTG TTTTCTCATTTTCTTTCTGATGTTAATTTGTCTCTTTTAACACTGCTTAACATTGACTCTTCTTGAGCAGATAGCACAAA GTTACTTAATAAGTAAGACTCGCCTTACCAAAAAAAAAATTAAATAAACTCCAAAGAATATATTTACCAACCAGACTGTA GGACTAATCAGAATCCATAAAAAGATTTTCGTTCACTTTTATATGTTGAATATTGGGTGCTAACGTCCATTTGCTTTGGT ACCTAGATATCTAATATCTAATATCTAAACATAGCCTAAAATAAACTCCTTGGTTGATCTGTTTTTCAATTGTTATTATT GCAATTGAAAAACAGACGGTAGGACTAATCAGAATCCATAAAAAGATTTTAGTTCACTTTTATATCTTGAATTGTGTGCT AACGTCCATTTTCTTTGGTACCCAGATATCTAATATCTTATATGATTATATTTATATCTAAACATAGCCTAATTGGAGTC AATTGCAAAGTGTTTCCCCTCCCCAGATTTGGAAAATTGGAGTCTATTCTATGCTCCGTTCTTTTCCCATTCAAACCTTT CCATTGGTTTGTGAGCATTTTTCAATAAGCTGCTTCCATGTTTGAGCTTATCCAAAATGTTAGAAAATGCTCTCTAGCGA ACTGGTAATTTTGGTCTTGAGATTCTGTCTTTTCTTTGTGTGTGTGTGTGTGTTTTTTTATCGGCCAAATTTCCCCTCCC TGGACCTTCCCCTCCCCAACCCATATGTCTCCCAGCACTTACCTCTTGATGTGTATATCTTAGAAATTTCACTTAATGTT CAATGATTGGTTCAAAACAGATATTCTATAATTTTAACCTCTTCTATGACTTGAAATGCAAGGTTGTTTTCTTTACAGTT TGCACCAAAGTACAGTTCTTTTAGTTCATGATGGTTATATGCATGAGCAAGGGAAAATCATGATTCTAATTTTGTTTTGC AGATTTTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAAATGCCTCAGGTGAGCTCACATTATCCACTAAGTGCG TGTTTGGATCAGCGTTTGTCACAATTAATTTTGCTGAAATTTATTAGTGTAAAAGTGAGTTGAAAGTCAAGCATTTTATG TTTAGACACATTTATGGAAAATTGATTTTGGTGAAATTCAGTTGTAAATCTCACAATTGATTGTTCAACGCAAAATCCAC TCTCTGTAGCTTCTACTAGAATTGATTTTGGGTCCGAAAACAATGCTCCAAAATGACTCAAAACAACAACATTTTCATCT AGAAGTGATTTTACTCTACCATAATTGATTATGGGTCTCCCAAGATGAAACCAAAGACACTCTAAATACGCCCAAACATG ACATTGTTTCTTAACATCCTGATTCGTGTAAAGAAATCCTTCTATAAATGCATAATCATTACCACTTATCATCCATTTTC CACAACATAAAGTTCCTAGTTTATCTGGGTTTATTTGGGCTATAAAGTATACTGAGCTATCTACTGTCTGGAATGAACCT AAACTTTTGATTGAAATTACAGGCTTAGGCAGAAAAAAGAGAGGAAAATAGGGTCTTCATAGCTCATACTATTCTGAATT ATTGATATAAGATTTTTATGGGTCCGAAAAAACATTAACTAAATGCTCTTGTCAATACTCATAATTAGGTTTATACTGGT AAAAACCCAGCTCACTAAGGTTAAGAACTTAATATCCCTAATATTTATACAATTATAATGTTTAGATTGCCTTGGTGACT CACATTGGAGTCGAAGTCATTGTAAAAGTTGATTCTTTGATGAATTGGCTATCTATGTGGCATTATTAAAAAATATACCC CCCTGTTTATTGCCTGTTATGTGCAAATAATTTTGTAGCTCTTTATTTTATGGTATTAAAATTTTCTGCTAAAATTAGCT TTTCTGTTTGGGCTTCTCAGGGAGGAATTGAAGATGGTGAAGATCCCAAATCTGCTGCCATTCGGGAACTTCGAGAAGAA ACTGGGATAGTATCTGCTGAGATAATTGCTGAGGTTTGTGCAAAAACTTTTCTCTTTTGAATTTGGTTTCTTTTGCAAAA GCAACAAATGTTTGTGCTTAAATCTAATCTCAGCTATCAGTGGTATGGTATCTTACCACATTCATCTATTTGAGTTCCAA GTAATTTTACTATTGTGTAATAAAATGAACAAGACCAATGTCTGAGAAGCAGTGAACTCGAACACCCGGAATCAAATTGT AGATAAGCATTTATGAATCTTGATGATTTTGCACATTATATAGAAAATTCTTTAATCATTCTCTGATAACTGGGTCGACG TTAGTCTTCTGCATTTGACGGAGCTCTTGCATTACAGGTTCAGAATTGGTTGACATATGACTTCCCTCCTGCTGTGAAGG CTAAAGTAAATCGTCTGTGGGGAGGTGAATGGCATGGACAAGCACAAAAGTGGTATGAATATTATTATTTCATTTGCTGA CAAAGCCACACACATGACACTTTAGTAGAACATGCCAAATTTTGACTTTTGGCCAGTTTATATGATGATGGATATCGAAA ACTTATTTACCATGGTACCTATGTTCCCTGCTTCAACTACCCACAGTGACAATTCTGAATGCATTTGTACCTATGTTATG AAATTATTCAATACGATTTTTTTGTTGTAAAATATCCATTTTCTATTTCTATAATTCCCATATCTAAGGATCTGCTGTCT CTTCTTCATATCTATATCATATGATCATTTCCATTCTCTATCAATGCTTTATTTCCCTTTTAATTTGCCAATTTTGACTA TCTAGTGAAGTTATAGCAATAAACACCAAGATGATCATTTCCATTCTCTATCAACGCATTCGGTTTTAAGTAAATGAACC AATATGAGGATCCGGATGCATAAATGCAAGTGTTGGTTGAGCTGTCTAATATCAAGTCTATAGAATTTGTAACCCTGTAG AACATTCTGCAATTGAAAGCGAGATGAGTGTGTGAAGAAGCCTGTACAACTTGAATAGGTGGTAACATTTTAGATTGATA GTGTATAAAGAGAGATGGATAGTTGGTCTGTCTAATATTGTAAAATGCGAAGAAAGAGTTTTTGATGTTGTAAAATCTGA ATTCATTGACCAAGGGTTGTTTGATTCCTTTTTCATTTTCTGAATTTAAAAATTACTTTCAGAATCAATTATTAAAATCT ATTATTCAGAAGAAGAAAATAAATTTGACTTGAAAACTAGAAACAAAAACAGAAAGCATGTTTAAACTGTTGAGATTTCA GTTTTAAAAATTGAAAATAAAAACTGCTTTTAAGAACTGTTTTTTAAAACTGTTCACATGAAATGAGTTTCTTTTTTGTT TTCTTTTTCTATATTAGAAAACTGGATACTGTTTTACAAAACAGTAATCAAACTGGCCCTTAAGGTATTCTCTTTACCTG AAGGGCAATGGTAGAAGGGAATGCTCTTCAGTAATTGACAAAATTAAGGCCAAGAAAATGAAGAAAAAGAAAACCTGAGT GTGTTAATCGAGACACCAAAATCCATAATATATGGTGTTTGCTTTGTGATCTGTTTTCTAGTAAAATTTGGTGTTTTGTG CACATGAGGTTGTTTGATCTAGATTTGCCAGGTTTTGTGCATGTTGTGTCAATTGTATACTTTAGTATATATAGGAGAAA TCACTGACATGCCAAGTTAAAATAAATATGGAATAAATTGCAATTAGATACTGTTTTCTGAACTTTTTACTTTCCAGTAG TGAGAATGAAAGTTTTCGTATTCATCCAGCTATTTGATTGTACATTTATCAAAGCCTGTATCTCTTATTGCTTCCTTACA GAGTGTTTTCATGTGTAATTTCTACCTGACTTAATTTTCTGACTATTATGAACATTTGATAGGTTTCTCATGAGATTAAC AAAAGATGACAACGAGGTCAACTTAGCAAATGGTGAAGCAGAAACAGAATTTGCAGAGTGGAAATGGACAGACCCTGAAG AAGTTATTGAGCAGGTTAGTTGGAACGAGGATGGAAATGAGTATTTAAATGAGACACAATTTTATTAAAAGAAACCTCAT GGTTAATAATATCCTGCAAATTTTGGTATTTGACCTAGCTCAAGGGTTATCTGGTAATCCATGTAGCCGATCTCACTTAG TGAGATAAGACTTTTGTTGTTGTTGTAAAAAACCTAATTTCTTATAACTGATTACAGGCAGTGGACTACAAGAGACCAAC ATATGAAGAGGTGATAAGAACCTTCAAGCCTTACCTTCAAGGGAATTCAATATCTGCCAAATGTAAATCTACTAAGTGGT GAATCATATGTGTGTGTATTTTAGTTCAATCCATCTTCATACCTAATTCCACTTACTGAGTTTGGATAGCACTCAGCTAT TGTAAATGGATCATAGTTAGAACTGCACTTCCCCTTTAGGTACTTGCCTTTTTGTAATAATAAGATGGGTGCAAATGCCT AATTTATTTTCTGAAACTTGCTGTGAGGATGATTGTGAATGTGTATAGAACTGTTCAATAAAGTTGGAAGCATGATGGTG CAAGATAGTGATCATGATTTAGTACCAAAGTTCCGGGAGCAATTTTTATAGGAAAGACTGAATGTTGAGGAATTACAACT GTCTCACTTTATGCTGCTTTTACAATGACTGAAATATATGTTACTTTTGAATAAGATTCTTGATGAAACTGCCACTGAGT GCTTAGATTTTCAACTGTTATTTACTTTTCTACATTTGAGGGGTAATCAATCTATCTATATAATAATATACTAATGGAAG GTTTTTTTCTAGAATGTTTTGCCACGTGTCACCCCATATCATCCCAAAAAAAATATACAAATTTTGTTTTTCTTAACTTT GAAATACA
CDS sequence (LotjaGi2g1v0063200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGGTCTTCCTCAAGGTTACCGCCCCAACGTTGGTGTCTGTCTCATCAACTCTAATGATCAGATTTTTGTGGCTTC TAGATTGAATGTTCCAGGAGCATGGCAAATGCCTCAGGGAGGAATTGAAGATGGTGAAGATCCCAAATCTGCTGCCATTC GGGAACTTCGAGAAGAAACTGGGATAGTATCTGCTGAGATAATTGCTGAGGTTCAGAATTGGTTGACATATGACTTCCCT CCTGCTGTGAAGGCTAAAGTAAATCGTCTGTGGGGAGGTGAATGGCATGGACAAGCACAAAAGTGGTTTCTCATGAGATT AACAAAAGATGACAACGAGGTCAACTTAGCAAATGGTGAAGCAGAAACAGAATTTGCAGAGTGGAAATGGACAGACCCTG AAGAAGTTATTGAGCAGGCAGTGGACTACAAGAGACCAACATATGAAGAGGTGATAAGAACCTTCAAGCCTTACCTTCAA GGGAATTCAATATCTGCCAAATGTAAATCTACTAAGTGGTGA
Protein sequence (LotjaGi2g1v0063200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGLPQGYRPNVGVCLINSNDQIFVASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREETGIVSAEIIAEVQNWLTYDFP PAVKAKVNRLWGGEWHGQAQKWFLMRLTKDDNEVNLANGEAETEFAEWKWTDPEEVIEQAVDYKRPTYEEVIRTFKPYLQ GNSISAKCKSTKW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 160 | 160 | 5.5E-72 | – | |
| Gene3D | 1 | 159 | 159 | 3.7E-50 | – | |
| PANTHER | 1 | 160 | 160 | 5.5E-72 | – | |
| Hamap | 2 | 160 | 159 | 31.456 | ||
| SUPERFAMILY | 7 | 158 | 152 | 2.71E-32 | ||
| ProSiteProfiles | 7 | 153 | 147 | 20.458 | ||
| CDD | 7 | 155 | 149 | 5.16083E-72 | ||
| Pfam | 8 | 150 | 143 | 2.9E-26 | ||
| PRINTS | 35 | 49 | 15 | 5.6E-7 | ||
| ProSitePatterns | 40 | 61 | 22 | - | ||
| PRINTS | 49 | 64 | 16 | 5.6E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0063200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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