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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0091200 |
| Transcript ID | LotjaGi2g1v0091200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT5G14230.1 ankyrin; Swiss-Prot: sp|Q01484|ANK2_HUMAN Ankyrin-2; TrEMBL-Plants: tr|D3J162|D3J162_MEDTR Ankyrin repeat RF-like protein, putative; Found in the gene: LotjaGi2g1v0091200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:27288337..27292026) extracted from Lotus japonicus Gifu genome v1.2.
GGTTAATGATTTAACTTATGCAACTGTATTTCGTGTTATACACATTACCGTCAACCGAATAGAACAAGTCATCATTGTTG TTCTCGCCACCATTTGGCACTCTCTAGTTAAAGCCGGCCCCTCGCGCGTGTTCCCTATCTCTCACTGTCTTAGAATAAAA ATTAGGAAAGCCACCAACCCTTCACCTGCACTTCCGTTCACTTTCTCCCCTTCAAGTTCATGGCCTTTGCTTCTTCTGTT CACACTTTCCCTTCCAAACCCACCAACAATCTATCATAAAATCACAGCCCAAAAAGACTAACGTAGCTAAGCCTATAACA GAAAAACATGGACAGGCTCATAAAGTTAGACCCATCAAACACAGTCCTGATCAGGGTCGAACCTGGACAACAAAAGTGCC ATGGAACTATCACCTTACGTAATGTCATGTACACCATGCCAGTGGCTTTTAGGCTTCAGCCATTGATCAAGACCCGTTAC ACCGTGAAGCCCCAATCAGGGATCATATCCCCTTTAGCCACACTCATCGTAGAGATCACCTACCACCCCCTACCAGGTTC TAATCTCCCACACTCTTTCCCTCACTCGGATGACTCTTTCTTTCTTCACAGTGTCTTGGCACCCGGTGTAGCCATCAAAG AACCTTCCTCCATGTTCGATTCCGTCCCAAACGATTGGTTCACCACTCGAAAGAAGCAAGTCTTCATCGACAGCGCCATC AAAATCATGTTCGTGGGGTCACAGATCCTCTCTCACCTTGTTGAAGATGGTAATTCAATGGATGACATCAGGGAGGTGCT AGAAAAAAGCGACACATCATGGAAATCGGTGAACTCCACAGACCAACAAGGCCGAACTCTGCTCCACTTGGCAGTTTCAA AAGCAAGACCAGATCTTGTTCAATTACTCCTTGAATTCGAACCTGATGTCGAAGCTGGCTTGAGTCGTTCTGGCGGCTCG AGTTCAACCCCACTCGAGGCTGCATCTTCCTCTGGTCAAGCTTTAATTGTTGAGCTCCTTCTAGCTCACAGGGCCAGCAC CGAGCGGTCAGAGACATCAACGTTTGGACCAATCCACCACGCGGCGAGAGAAGGACATGTAGAGGTTCTGAGGCTTCTCT TGCTTAAAGGAGCCAAAGTGAATGCGCTCGTTAAAGATGGCGGCAACACTGCCCTGCACCTCGCTGTTGAAGAACGCCGA AGAGAATGTGTCAGGCTCCTCCTAGCAAACGGGGCCAGAACTGATATCAGAAACGCCAGAGAAGGTAATATCATGAATCA GTTATCCCAAATAGCCCTTAAGATATCTGCTAAAAAGTATAGAATTTATATTCTACGTTTAACACACACCCTTCACGCGC ATATATAGACTTAGAATTTGACTTTATTATTAAAATAGTGAATGAAACAATAATCAAACTCAAGACTATGACACTAAAGC TCAGAAACAAATTATCCTAAAGGTTTCAATAAGTTTTTCTTCCCTAACCTTTAAGAAATATTTGACATTGGTCTCTCGCC GGAGTAAAGGTGGGTTTTAGTCCCTAACCTTTGTTAAAAGGCGGTTTTGTTCCCTCCGGAGCTCTAAGTCAACGCCGGAG CTCCGGTGGCTCATGTGGCATGGCCACGTCAGATTAATAAGCTTAGGTGGATTTTTTTTTCCTTTTTCATTTAAATTTTA AAAAAAATTAAATCATAATTAAAATCCTTAAATCTCTTCATCCTAATTAAATCTTTCACCTAATTCATCTCTTCATCTTC ATCTTCAATTTCTTGACAACAAGACATTCCAATTCCATCACCAACCCAATACAGCTAGAACCAAACCACAAAATTAAATC AACAAACCTAACTATAACTCTCAAATCCAGATTTTGTTCTCTCTCTCTACCTGTGAATATTCACTCTTCCTTCTCTATCG TGGTTGTCCCTTTTGCATCTCATCTTCATGTTACTGTTTCAGAATAAGAATCAACAAAAAAATAAGGTTCTGTTAATTAT GGGTTAATTTTTTTTAGAATTTAAATGAAAAAAAATTCTACATGGCCTCATTAATCTGATGTGGCTATGCCACATGGGCC GCCAGAGCTCCGGCGTTGACCCAGAGCTCCGGAGGGACCAAAACCAAACCTTTTAACAAAAGTTAGGGACTAAAACCCAC CTTTACTCTGACGATGGACCAATACCAAGCATTTTGTAAAGGTTAGGGACGAAAAACATATTTAAACCTATCCTAAAGGT TCGAGTTTAAGTTATTGACTAAATGATACATGAATAATTGCATATTATATTTCTTGCAGGTGATACAGCTTTGCACATAG CATCAGCCACAGGTGACGAGAGCATGGTGAAGCTCTTGCTACAAAAGGGCGCCAACAAAGACGCGAGGAACAATCAAGGG AAGATAGCATACGATGTTGCAGCCGAGAACGGCCACACGAAGCTCTTCGACGTACTTCGCTTGGGGGACAGATTGTGTGT GGCGGCGAGAAACGGCGAAGTGAGGAGCATCCACAAGGTCTTAGAAACTGGCGCTGCCATCAATGGAAGGGATCAGAATG GATGGACAGCGCTGCACAGAGCCTCGTTCAAAGGGAGAGTGGATGCAGTGAGGTTCCTTGTGGAGAAAGGGATCGATGTG GATGCGAAGGACGAAGAAGGGTACACGGCTTTGCATTGTGCTGCTGAATCAGGCCATGCGGATGTGACGGAGTTTTTGGT GAAGAAGGGTGTGGATGTTGAAGCCAGAACCAGTAAAGGCGTGAGTGCGTTGCAAATAGCTGAGTCGTTGCATTATGTTG GGATTACGAGGATTCTTGTTAATGGTGGGGCTTGTAGAGAAAGTTTGAATCAAATGACGCAAGGAGCATCACCTGCTAAG ATTCCATTTGTTATTAGTGGGGCTGTGATAAAGAAGAAGAAACAGATGGGCAGGATCAGAGTGTTGAGGGGGAGTTTTGA TCGTTCTACTGCTTTAGCTGTGCTCTAGCAGGTAGTGTTGCTTACTGATTTGGCATATTGGAACTGAGAAGATATTGAGA TGAGTTTTGGGTTTTGGCTGTGATTTTAATTTGTTGATGGAATTGTACATTCAAAACAATGTTGTTTCCTATGGTGATGA TTGTTATTGATGCTCTTCATCCCAAGCTTTGCCCATGGGGTACAATACTGTATTTAGTCCCTATGAAAATTGTTAGTAAT ACACGTTTTTTCTTTACGAGGTTAGTAAAATTACAGTAGATAGATAAAATTTAGGTTTAATAGCTTTTTTTGGTCCCTAA CGTTTAACGATTTAACAAAATTAATCCTCCATGAATTTATTAGATTTTCCAATCCCTCACTTAAGGCCTCCGTTGCAGAA CCATACTTCTATCCAACTTCCGTCCGATTTTTAACGTTAGACGCCTACGTGGCCTACTTAAGTGAGGTGGCAAGCTGATT GGAGAAAGAAAGGGGCCTAGAGGAAGCACGTGATAGGCATGTGACTTGTTCATCATCTTCAACCTCCATTAGTTGGATTA TCAGAAACCCTATAAAAGAAGGATTTTCTCTCCTCGACAAATTGGATCCTAAATTTCTCTTATTCTGACGAGACTAGCGA AGGAGAAGAAGAATTGAGCTTTGTATTGAATAAACAATCAGAAGCATCTACTAGCAATGCAATTACAGCTACTGGACAGC TCAGCAGTGC
CDS sequence (LotjaGi2g1v0091200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAGGCTCATAAAGTTAGACCCATCAAACACAGTCCTGATCAGGGTCGAACCTGGACAACAAAAGTGCCATGGAAC TATCACCTTACGTAATGTCATGTACACCATGCCAGTGGCTTTTAGGCTTCAGCCATTGATCAAGACCCGTTACACCGTGA AGCCCCAATCAGGGATCATATCCCCTTTAGCCACACTCATCGTAGAGATCACCTACCACCCCCTACCAGGTTCTAATCTC CCACACTCTTTCCCTCACTCGGATGACTCTTTCTTTCTTCACAGTGTCTTGGCACCCGGTGTAGCCATCAAAGAACCTTC CTCCATGTTCGATTCCGTCCCAAACGATTGGTTCACCACTCGAAAGAAGCAAGTCTTCATCGACAGCGCCATCAAAATCA TGTTCGTGGGGTCACAGATCCTCTCTCACCTTGTTGAAGATGGTAATTCAATGGATGACATCAGGGAGGTGCTAGAAAAA AGCGACACATCATGGAAATCGGTGAACTCCACAGACCAACAAGGCCGAACTCTGCTCCACTTGGCAGTTTCAAAAGCAAG ACCAGATCTTGTTCAATTACTCCTTGAATTCGAACCTGATGTCGAAGCTGGCTTGAGTCGTTCTGGCGGCTCGAGTTCAA CCCCACTCGAGGCTGCATCTTCCTCTGGTCAAGCTTTAATTGTTGAGCTCCTTCTAGCTCACAGGGCCAGCACCGAGCGG TCAGAGACATCAACGTTTGGACCAATCCACCACGCGGCGAGAGAAGGACATGTAGAGGTTCTGAGGCTTCTCTTGCTTAA AGGAGCCAAAGTGAATGCGCTCGTTAAAGATGGCGGCAACACTGCCCTGCACCTCGCTGTTGAAGAACGCCGAAGAGAAT GTGTCAGGCTCCTCCTAGCAAACGGGGCCAGAACTGATATCAGAAACGCCAGAGAAGGTGATACAGCTTTGCACATAGCA TCAGCCACAGGTGACGAGAGCATGGTGAAGCTCTTGCTACAAAAGGGCGCCAACAAAGACGCGAGGAACAATCAAGGGAA GATAGCATACGATGTTGCAGCCGAGAACGGCCACACGAAGCTCTTCGACGTACTTCGCTTGGGGGACAGATTGTGTGTGG CGGCGAGAAACGGCGAAGTGAGGAGCATCCACAAGGTCTTAGAAACTGGCGCTGCCATCAATGGAAGGGATCAGAATGGA TGGACAGCGCTGCACAGAGCCTCGTTCAAAGGGAGAGTGGATGCAGTGAGGTTCCTTGTGGAGAAAGGGATCGATGTGGA TGCGAAGGACGAAGAAGGGTACACGGCTTTGCATTGTGCTGCTGAATCAGGCCATGCGGATGTGACGGAGTTTTTGGTGA AGAAGGGTGTGGATGTTGAAGCCAGAACCAGTAAAGGCGTGAGTGCGTTGCAAATAGCTGAGTCGTTGCATTATGTTGGG ATTACGAGGATTCTTGTTAATGGTGGGGCTTGTAGAGAAAGTTTGAATCAAATGACGCAAGGAGCATCACCTGCTAAGAT TCCATTTGTTATTAGTGGGGCTGTGATAAAGAAGAAGAAACAGATGGGCAGGATCAGAGTGTTGAGGGGGAGTTTTGATC GTTCTACTGCTTTAGCTGTGCTCTAG
Protein sequence (LotjaGi2g1v0091200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRLIKLDPSNTVLIRVEPGQQKCHGTITLRNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLATLIVEITYHPLPGSNL PHSFPHSDDSFFLHSVLAPGVAIKEPSSMFDSVPNDWFTTRKKQVFIDSAIKIMFVGSQILSHLVEDGNSMDDIREVLEK SDTSWKSVNSTDQQGRTLLHLAVSKARPDLVQLLLEFEPDVEAGLSRSGGSSSTPLEAASSSGQALIVELLLAHRASTER SETSTFGPIHHAAREGHVEVLRLLLLKGAKVNALVKDGGNTALHLAVEERRRECVRLLLANGARTDIRNAREGDTALHIA SATGDESMVKLLLQKGANKDARNNQGKIAYDVAAENGHTKLFDVLRLGDRLCVAARNGEVRSIHKVLETGAAINGRDQNG WTALHRASFKGRVDAVRFLVEKGIDVDAKDEEGYTALHCAAESGHADVTEFLVKKGVDVEARTSKGVSALQIAESLHYVG ITRILVNGGACRESLNQMTQGASPAKIPFVISGAVIKKKKQMGRIRVLRGSFDRSTALAVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 541 | 541 | 2.3E-222 | – | |
| PANTHER | 1 | 541 | 541 | 2.3E-222 | – | |
| Gene3D | 1 | 137 | 137 | 6.4E-10 | ||
| SUPERFAMILY | 2 | 149 | 148 | 1.39E-14 | ||
| ProSiteProfiles | 4 | 136 | 133 | 14.756 | ||
| Pfam | 5 | 107 | 103 | 5.2E-6 | ||
| Gene3D | 138 | 310 | 173 | 6.8E-38 | ||
| Pfam | 154 | 237 | 84 | 2.2E-7 | ||
| SUPERFAMILY | 167 | 495 | 329 | 1.98E-68 | ||
| ProSiteProfiles | 167 | 497 | 331 | 79.692 | ||
| SMART | 174 | 203 | 30 | 0.0015 | ||
| ProSiteProfiles | 174 | 206 | 33 | 9.992 | ||
| SMART | 211 | 240 | 30 | 47.0 | ||
| SMART | 244 | 273 | 30 | 0.0046 | ||
| ProSiteProfiles | 244 | 276 | 33 | 11.14 | ||
| Pfam | 248 | 308 | 61 | 5.4E-11 | ||
| SMART | 278 | 307 | 30 | 2.2E-4 | ||
| ProSiteProfiles | 278 | 310 | 33 | 12.716 | ||
| Gene3D | 311 | 367 | 57 | 5.3E-15 | ||
| SMART | 312 | 341 | 30 | 1.2E-6 | ||
| ProSiteProfiles | 312 | 344 | 33 | 14.933 | ||
| Pfam | 313 | 344 | 32 | 2.3E-6 | ||
| Gene3D | 368 | 507 | 140 | 1.9E-36 | ||
| Pfam | 371 | 462 | 92 | 4.3E-16 | ||
| ProSiteProfiles | 399 | 431 | 33 | 13.998 | ||
| SMART | 399 | 428 | 30 | 1.3E-4 | ||
| SMART | 432 | 461 | 30 | 2.3E-6 | ||
| ProSiteProfiles | 432 | 464 | 33 | 13.731 | ||
| SMART | 465 | 497 | 33 | 3000.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0091200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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