Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0124300 |
Transcript ID | LotjaGi2g1v0124300.1 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|I1L314|I1L314_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi2g1v0124300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:45664856..45668467) extracted from Lotus japonicus Gifu genome v1.2.
GTAGAGGGGCAATGAACGAACATTCGAGACACAACACAACCGTTTCCAATTCCATAGAAAGTTCTCGATTCCATCCCGCG TAATTCACATCCAAACAAAAACGACACCGTACCACTGCAACCCAATTTTTCTCAGAATCGAGAGAAGAGTAGAAGACTCC AGAACCAGTTGGTTCCCTCACCCTCGCTCTCACTCATATTCTCCCTTTTCTCCTATATAAGCAAGCACCTCTCTCGTTCT TCACCTCGTGAATCGTCGAAATCAAATAGCCCACACTCTCTCTGCATTTCGCTACCCTCTCTCCGTTTCACGTCTCTTTC GATCGAGTTTCCCATGGCAGACGCTGAAACCTTCGCTTTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAACA CCTTCTATAGCAACAAGGAGATTTTCTTGCGTGAACTCATCAGCAATGCTTCTGATGTAAGCCTCCATCATCGTTTAACT GTTTTTCACAATCAAATGCTCATCCCGTTAGTCTTCGTAGTCAATTAGTTTCTGAGCAATGAGAATGATGCATGTAGTGT TTTAGGTGTTGAATTAGGTTTTGAATTTCATCTTGTTGATTCAATTCAGTTGGTTTCTGAAATTTTTGTCTTGGTTTTAG GATTGATTTGATTAGATAAACATTTATATTCTCTGTAGTGTAATTTTCACTGAGACTGAGGATAATTCGTTGACATAAAA TGTGAGAATTGTTTCGGGAAATTTTGAACGATTTGTTCGTTTTCGAATTGTAGCTATGGTAATGAGTATTGTAGAAGTGT TCTGTTAATCAAACAAGTATCTCTTAGCATTAATTTTGATTCACAGTTAGGGAATCAGTAATGTGGATTTTGTTCGTGAT TAATTTGATTGAGATGATTGTTTGCATTGATTTGCATAATTCAATGGCTTCTACCTGTGTTTCTGATTGTGGTTTTTGGT GCCATAGGCTTTGGATAAGATTCGATTTGAGAGCTTAACAGACAAGAGCAAGCTCGATGGTCAACCGGAGCTTTTTATCA GGCTCGTCCCTGATAAGGACAACAAGACTCTTTCCATTATTGACAGTGGCATTGGCATGACCAAAGCAGGTAATGTAGTG AACTAGTGATCTCTCACCTCTCCAATTGGAGTTTTGAATGATCATTTATACAATGGAGCTTGTGTTTCTGATCTATGTTT GTTGCTTTTTGGTTTGTCTTATCCAGATTTGGTGAACAATTTGGGTACAATTGCGAGATCTGGGACCAAGGAATTCATGG AGGCGTTGCAGGCTGGTGCCGATGTCAGCATGATTGGTCAATTTGGTGTTGGGTTCTACTCTGCGTACCTTGTTGCTGAG AAAGTCATTGTCACGACAAAGCACAATGACGACGAACAGTACATTTGGGAATCGCAGGCCGGCGGCTCTTTCACCGTTAC AAGGGACGTCGAAGGCGAGCAACTAGGAAGGGGAACCAAGATTACCCTCTTCCTTAAGGAGGATCAGGTAGGCCTAACAA CTTAACCAGCACCATTTTGTTATTTTTGTTGTCTAACTCTAAGGCTCTAAGTTGAATTGTCACACAATCCATTGTGTTAT ATTGCTGTAAAGTTGGGTTTTCTACTTGGCCATTCTGTTATTGAAATAATGGATTGATTTTAGCTTTACCGATTTAGTAC TTTTGCTGAATAGTTTAATTATTTTGTTTCTGTTGTTTGGTGGTTGTATTGTGCTATTGCTTATTTGATTTGATGTTGTT TTGTTTTGGAACAGTTGGAATACTTGGAGGAGAGGAGGATCAAGGATCTTGTGAAGAAGCACTCTGAATTTATCAGCTAT CCCATTTATCTTTGGACTGAGAAGACTACCGAAAAAGAGATCAGCGATGATGAAGATGATGAGCCCAAGAAGGAGGAAGA AGGAGATGTTGAGGAGGTTGACGAGGAGGAGGAGAAGGAATCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGG AACTCATCAACAAGCAGAAGCCTATCTGGTTGCGGAAGCCAGAAGAGATCACCAAGGATGAATATGCTTCTTTCTACAAG AGCTTAACCAATGACTGGGAAGACCACTTGGCTGTGAAACATTTCGCTGTGGAGGGCCAGCTTGAATTCAAAGCCATCCT GTTTGTTCCGAAAAGGGCACCCTTTGATTTGTTTGACACAAGGAAGAAGATGAACAACATCAAGCTCTATGTCAGGAGGG TGTTTATCATGGACAATTGTGAGGAGCTTATACCTGAGTACCTTGGATTTGTGAAAGGTGTTGTTGATTCTGATGACTTG CCGCTCAACATTTCTCGTGAGATGCTGCAACAGAACAAAATCTTGAAGGTCATCAGGAAGAATCTTGTGAAGAAGTGCAT TGAGATGTTCAATGAGATTGCTGAGAACAAGGAAGACTACAACAAGTTCTATGATGCTTTCTCCAAGAATTTGAAGCTGG GTATCCATGAGGATAGTCAGAACAGGGTCAAATTAGCTGATTTGCTCAGATACCACTCTACAAAAAGTGGAGATGAGTTG ACAAGCTTGAAGGACTATGTTACCAGAATGAAGGAGGGCCAGAAAGACATCTACTACATTACTGGAGAGAGCAAAAAGGC TGTGGAGAATTCTCCATTTTTGGAGAGACTGAAGAAGAAGGGCTATGAGGTGCTTTTCATGGTGGACGCCATTGATGAGT ATGCTGTTGGACAACTTAAAGAGTACGATGGCAAAAAATTGGTTTCAGCTACAAAGGAAGGATTGAAATTGGACGATGAG ACTGAGGAGGAGAAAAAGAAAAAGGAGGAGAAGAAGAAGTCATTTGAGGATCTCTGCAAAGTCATCAAGGAAATCTTGGG AGATAAAGTTGAGAAGGTTGTTGTTTCTGACAGGATTGTTGATTCTCCATGCTGTTTGGTGACTGGTGAGTATGGATGGA CTGCAAACATGGAGAGGATCATGAAGGCTCAGGCTCTGAGAGATAGCAGCATGAGTGGCTACATGTCTAGCAAGAAGACT ATGGAAATCAACCCTGATAATGGCATTATGGAGGAGTTGAGGAAGAGGGCAGAAGCTGACAAGAATGACAAGTCAGTGAA GGACCTAGTGTTGCTTCTCTTTGAGACCGCACTCTTGACTTCAGGCTTCAGCCTGGAAGATCCCAACACTTTCGCTGCAA GAATTCACAGGATGTTGAAGTTGGGTTTGAGTATTGATGAGGAAGCTGGTGAAGATGATGTTGACATGCCTCCACTTGAA GAGGACGGTGCTGAGGAGAGCAAGATGGAAGAAGTGGACTAAAGGGCCTGAAGGTTCTAAACTTCTAATGTCAACTGTTA TTGTTCTCTATCTGGATGCTGATAGTTTTTTGTTTTTGTTTTTGTGCATTTTGTTATAGTTTAATCTGGATTTTCGGTTA TGATGTATAAGAAATGAGAACGTCTGTCATTCACCATATTATGTCCAGGTTATGTTATCATTGATGCATAAATGAGAAAC AGTGCTGTTCACTGCCCCTGACCTTTTCTATTTGGTCTGAAAGGTTCTGCACTTCAAGCATGATTATAATATAGGCTTAA TCCTAATTAATC
CDS sequence (LotjaGi2g1v0124300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGACGCTGAAACCTTCGCTTTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAACACCTTCTATAGCAA CAAGGAGATTTTCTTGCGTGAACTCATCAGCAATGCTTCTGATGCTTTGGATAAGATTCGATTTGAGAGCTTAACAGACA AGAGCAAGCTCGATGGTCAACCGGAGCTTTTTATCAGGCTCGTCCCTGATAAGGACAACAAGACTCTTTCCATTATTGAC AGTGGCATTGGCATGACCAAAGCAGATTTGGTGAACAATTTGGGTACAATTGCGAGATCTGGGACCAAGGAATTCATGGA GGCGTTGCAGGCTGGTGCCGATGTCAGCATGATTGGTCAATTTGGTGTTGGGTTCTACTCTGCGTACCTTGTTGCTGAGA AAGTCATTGTCACGACAAAGCACAATGACGACGAACAGTACATTTGGGAATCGCAGGCCGGCGGCTCTTTCACCGTTACA AGGGACGTCGAAGGCGAGCAACTAGGAAGGGGAACCAAGATTACCCTCTTCCTTAAGGAGGATCAGTTGGAATACTTGGA GGAGAGGAGGATCAAGGATCTTGTGAAGAAGCACTCTGAATTTATCAGCTATCCCATTTATCTTTGGACTGAGAAGACTA CCGAAAAAGAGATCAGCGATGATGAAGATGATGAGCCCAAGAAGGAGGAAGAAGGAGATGTTGAGGAGGTTGACGAGGAG GAGGAGAAGGAATCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAGCCTATCTG GTTGCGGAAGCCAGAAGAGATCACCAAGGATGAATATGCTTCTTTCTACAAGAGCTTAACCAATGACTGGGAAGACCACT TGGCTGTGAAACATTTCGCTGTGGAGGGCCAGCTTGAATTCAAAGCCATCCTGTTTGTTCCGAAAAGGGCACCCTTTGAT TTGTTTGACACAAGGAAGAAGATGAACAACATCAAGCTCTATGTCAGGAGGGTGTTTATCATGGACAATTGTGAGGAGCT TATACCTGAGTACCTTGGATTTGTGAAAGGTGTTGTTGATTCTGATGACTTGCCGCTCAACATTTCTCGTGAGATGCTGC AACAGAACAAAATCTTGAAGGTCATCAGGAAGAATCTTGTGAAGAAGTGCATTGAGATGTTCAATGAGATTGCTGAGAAC AAGGAAGACTACAACAAGTTCTATGATGCTTTCTCCAAGAATTTGAAGCTGGGTATCCATGAGGATAGTCAGAACAGGGT CAAATTAGCTGATTTGCTCAGATACCACTCTACAAAAAGTGGAGATGAGTTGACAAGCTTGAAGGACTATGTTACCAGAA TGAAGGAGGGCCAGAAAGACATCTACTACATTACTGGAGAGAGCAAAAAGGCTGTGGAGAATTCTCCATTTTTGGAGAGA CTGAAGAAGAAGGGCTATGAGGTGCTTTTCATGGTGGACGCCATTGATGAGTATGCTGTTGGACAACTTAAAGAGTACGA TGGCAAAAAATTGGTTTCAGCTACAAAGGAAGGATTGAAATTGGACGATGAGACTGAGGAGGAGAAAAAGAAAAAGGAGG AGAAGAAGAAGTCATTTGAGGATCTCTGCAAAGTCATCAAGGAAATCTTGGGAGATAAAGTTGAGAAGGTTGTTGTTTCT GACAGGATTGTTGATTCTCCATGCTGTTTGGTGACTGGTGAGTATGGATGGACTGCAAACATGGAGAGGATCATGAAGGC TCAGGCTCTGAGAGATAGCAGCATGAGTGGCTACATGTCTAGCAAGAAGACTATGGAAATCAACCCTGATAATGGCATTA TGGAGGAGTTGAGGAAGAGGGCAGAAGCTGACAAGAATGACAAGTCAGTGAAGGACCTAGTGTTGCTTCTCTTTGAGACC GCACTCTTGACTTCAGGCTTCAGCCTGGAAGATCCCAACACTTTCGCTGCAAGAATTCACAGGATGTTGAAGTTGGGTTT GAGTATTGATGAGGAAGCTGGTGAAGATGATGTTGACATGCCTCCACTTGAAGAGGACGGTGCTGAGGAGAGCAAGATGG AAGAAGTGGACTAA
Protein sequence (LotjaGi2g1v0124300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQPELFIRLVPDKDNKTLSIID SGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVT RDVEGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEEVDEE EEKESKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFAVEGQLEFKAILFVPKRAPFD LFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAEN KEDYNKFYDAFSKNLKLGIHEDSQNRVKLADLLRYHSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLER LKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFEDLCKVIKEILGDKVEKVVVS DRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFET ALLTSGFSLEDPNTFAARIHRMLKLGLSIDEEAGEDDVDMPPLEEDGAEESKMEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PIRSF | 1 | 697 | 697 | 7.8E-262 | ||
PANTHER | 1 | 242 | 242 | 0.0 | ||
PANTHER | 1 | 242 | 242 | 0.0 | – | |
Hamap | 2 | 664 | 663 | 27.542 | ||
Gene3D | 5 | 210 | 206 | 5.7E-108 | ||
PRINTS | 5 | 25 | 21 | 2.9E-84 | ||
SUPERFAMILY | 5 | 213 | 209 | 1.31E-76 | ||
CDD | 14 | 202 | 189 | 8.74233E-111 | – | |
ProSitePatterns | 25 | 34 | 10 | - | ||
PRINTS | 26 | 48 | 23 | 2.9E-84 | ||
SMART | 27 | 182 | 156 | 6.9E-11 | ||
Pfam | 27 | 181 | 155 | 1.5E-15 | ||
PRINTS | 75 | 92 | 18 | 2.9E-84 | ||
PRINTS | 93 | 110 | 18 | 2.9E-84 | ||
PRINTS | 118 | 140 | 23 | 2.9E-84 | ||
PRINTS | 170 | 187 | 18 | 2.9E-84 | ||
Pfam | 184 | 692 | 509 | 3.1E-237 | ||
PRINTS | 188 | 206 | 19 | 2.9E-84 | ||
Gene3D | 211 | 252 | 42 | 5.7E-108 | – | |
MobiDBLite | 215 | 247 | 33 | - | – | |
MobiDBLite | 217 | 240 | 24 | - | – | |
Coils | 227 | 256 | 30 | - | – | |
PANTHER | 243 | 697 | 455 | 0.0 | – | |
PANTHER | 243 | 697 | 455 | 0.0 | ||
Gene3D | 261 | 434 | 174 | 1.0E-81 | – | |
SUPERFAMILY | 262 | 517 | 256 | 2.88E-109 | ||
Gene3D | 435 | 522 | 88 | 1.3E-41 | – | |
Coils | 522 | 542 | 21 | - | – | |
Gene3D | 523 | 668 | 146 | 6.9E-65 | ||
SUPERFAMILY | 541 | 663 | 123 | 4.58E-39 | ||
MobiDBLite | 671 | 697 | 27 | - | – | |
MobiDBLite | 672 | 697 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi2g1v0124300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…