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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0124300 |
| Transcript ID | LotjaGi2g1v0124300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein htpG family protein; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|I1L314|I1L314_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi2g1v0124300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:45665174..45668177) extracted from Lotus japonicus Gifu genome v1.2.
TCGATCGAGTTTCCCATGGCAGACGCTGAAACCTTCGCTTTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAA CACCTTCTATAGCAACAAGGAGATTTTCTTGCGTGAACTCATCAGCAATGCTTCTGATGTAAGCCTCCATCATCGTTTAA CTGTTTTTCACAATCAAATGCTCATCCCGTTAGTCTTCGTAGTCAATTAGTTTCTGAGCAATGAGAATGATGCATGTAGT GTTTTAGGTGTTGAATTAGGTTTTGAATTTCATCTTGTTGATTCAATTCAGTTGGTTTCTGAAATTTTTGTCTTGGTTTT AGGATTGATTTGATTAGATAAACATTTATATTCTCTGTAGTGTAATTTTCACTGAGACTGAGGATAATTCGTTGACATAA AATGTGAGAATTGTTTCGGGAAATTTTGAACGATTTGTTCGTTTTCGAATTGTAGCTATGGTAATGAGTATTGTAGAAGT GTTCTGTTAATCAAACAAGTATCTCTTAGCATTAATTTTGATTCACAGTTAGGGAATCAGTAATGTGGATTTTGTTCGTG ATTAATTTGATTGAGATGATTGTTTGCATTGATTTGCATAATTCAATGGCTTCTACCTGTGTTTCTGATTGTGGTTTTTG GTGCCATAGGCTTTGGATAAGATTCGATTTGAGAGCTTAACAGACAAGAGCAAGCTCGATGGTCAACCGGAGCTTTTTAT CAGGCTCGTCCCTGATAAGGACAACAAGACTCTTTCCATTATTGACAGTGGCATTGGCATGACCAAAGCAGGTAATGTAG TGAACTAGTGATCTCTCACCTCTCCAATTGGAGTTTTGAATGATCATTTATACAATGGAGCTTGTGTTTCTGATCTATGT TTGTTGCTTTTTGGTTTGTCTTATCCAGATTTGGTGAACAATTTGGGTACAATTGCGAGATCTGGGACCAAGGAATTCAT GGAGGCGTTGCAGGCTGGTGCCGATGTCAGCATGATTGGTCAATTTGGTGTTGGGTTCTACTCTGCGTACCTTGTTGCTG AGAAAGTCATTGTCACGACAAAGCACAATGACGACGAACAGTACATTTGGGAATCGCAGGCCGGCGGCTCTTTCACCGTT ACAAGGGACGTCGAAGGCGAGCAACTAGGAAGGGGAACCAAGATTACCCTCTTCCTTAAGGAGGATCAGGTAGGCCTAAC AACTTAACCAGCACCATTTTGTTATTTTTGTTGTCTAACTCTAAGGCTCTAAGTTGAATTGTCACACAATCCATTGTGTT ATATTGCTGTAAAGTTGGGTTTTCTACTTGGCCATTCTGTTATTGAAATAATGGATTGATTTTAGCTTTACCGATTTAGT ACTTTTGCTGAATAGTTTAATTATTTTGTTTCTGTTGTTTGGTGGTTGTATTGTGCTATTGCTTATTTGATTTGATGTTG TTTTGTTTTGGAACAGTTGGAATACTTGGAGGAGAGGAGGATCAAGGATCTTGTGAAGAAGCACTCTGAATTTATCAGCT ATCCCATTTATCTTTGGACTGAGAAGACTACCGAAAAAGAGATCAGCGATGATGAAGATGATGAGCCCAAGAAGGAGGAA GAAGGAGATGTTGAGGAGGTTGACGAGGAGGAGGAGAAGGAATCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTG GGAACTCATCAACAAGCAGAAGCCTATCTGGTTGCGGAAGCCAGAAGAGATCACCAAGGATGAATATGCTTCTTTCTACA AGAGCTTAACCAATGACTGGGAAGACCACTTGGCTGTGAAACATTTCGCTGTGGAGGGCCAGCTTGAATTCAAAGCCATC CTGTTTGTTCCGAAAAGGGCACCCTTTGATTTGTTTGACACAAGGAAGAAGATGAACAACATCAAGCTCTATGTCAGGAG GGTGTTTATCATGGACAATTGTGAGGAGCTTATACCTGAGTACCTTGGATTTGTGAAAGGTGTTGTTGATTCTGATGACT TGCCGCTCAACATTTCTCGTGAGATGCTGCAACAGAACAAAATCTTGAAGGTCATCAGGAAGAATCTTGTGAAGAAGTGC ATTGAGATGTTCAATGAGATTGCTGAGAACAAGGAAGACTACAACAAGTTCTATGATGCTTTCTCCAAGAATTTGAAGCT GGGTATCCATGAGGATAGTCAGAACAGGGTCAAATTAGCTGATTTGCTCAGATACCACTCTACAAAAAGTGGAGATGAGT TGACAAGCTTGAAGGACTATGTTACCAGAATGAAGGAGGGCCAGAAAGACATCTACTACATTACTGGAGAGAGCAAAAAG GCTGTGGAGAATTCTCCATTTTTGGAGAGACTGAAGAAGAAGGGCTATGAGGTGCTTTTCATGGTGGACGCCATTGATGA GTATGCTGTTGGACAACTTAAAGAGTACGATGGCAAAAAATTGGTTTCAGCTACAAAGGAAGGATTGAAATTGGACGATG AGACTGAGGAGGAGAAAAAGAAAAAGGAGGAGAAGAAGAAGTCATTTGAGGATCTCTGCAAAGTCATCAAGGAAATCTTG GGAGATAAAGTTGAGAAGGTTGTTGTTTCTGACAGGATTGTTGATTCTCCATGCTGTTTGGTGACTGGTGAGTATGGATG GACTGCAAACATGGAGAGGATCATGAAGGCTCAGGCTCTGAGAGATAGCAGCATGAGTGGCTACATGTCTAGCAAGAAGA CTATGGAAATCAACCCTGATAATGGCATTATGGAGGAGTTGAGGAAGAGGGCAGAAGCTGACAAGAATGACAAGTCAGTG AAGGACCTAGTGTTGCTTCTCTTTGAGACCGCACTCTTGACTTCAGGCTTCAGCCTGGAAGATCCCAACACTTTCGCTGC AAGAATTCACAGGATGTTGAAGTTGGGTTTGAGTATTGATGAGGAAGCTGGTGAAGATGATGTTGACATGCCTCCACTTG AAGAGGACGGTGCTGAGGAGAGCAAGATGGAAGAAGTGGACTAA
CDS sequence (LotjaGi2g1v0124300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGACGCTGAAACCTTCGCTTTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAACACCTTCTATAGCAA CAAGGAGATTTTCTTGCGTGAACTCATCAGCAATGCTTCTGATGCTTTGGATAAGATTCGATTTGAGAGCTTAACAGACA AGAGCAAGCTCGATGGTCAACCGGAGCTTTTTATCAGGCTCGTCCCTGATAAGGACAACAAGACTCTTTCCATTATTGAC AGTGGCATTGGCATGACCAAAGCAGATTTGGTGAACAATTTGGGTACAATTGCGAGATCTGGGACCAAGGAATTCATGGA GGCGTTGCAGGCTGGTGCCGATGTCAGCATGATTGGTCAATTTGGTGTTGGGTTCTACTCTGCGTACCTTGTTGCTGAGA AAGTCATTGTCACGACAAAGCACAATGACGACGAACAGTACATTTGGGAATCGCAGGCCGGCGGCTCTTTCACCGTTACA AGGGACGTCGAAGGCGAGCAACTAGGAAGGGGAACCAAGATTACCCTCTTCCTTAAGGAGGATCAGTTGGAATACTTGGA GGAGAGGAGGATCAAGGATCTTGTGAAGAAGCACTCTGAATTTATCAGCTATCCCATTTATCTTTGGACTGAGAAGACTA CCGAAAAAGAGATCAGCGATGATGAAGATGATGAGCCCAAGAAGGAGGAAGAAGGAGATGTTGAGGAGGTTGACGAGGAG GAGGAGAAGGAATCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAGCCTATCTG GTTGCGGAAGCCAGAAGAGATCACCAAGGATGAATATGCTTCTTTCTACAAGAGCTTAACCAATGACTGGGAAGACCACT TGGCTGTGAAACATTTCGCTGTGGAGGGCCAGCTTGAATTCAAAGCCATCCTGTTTGTTCCGAAAAGGGCACCCTTTGAT TTGTTTGACACAAGGAAGAAGATGAACAACATCAAGCTCTATGTCAGGAGGGTGTTTATCATGGACAATTGTGAGGAGCT TATACCTGAGTACCTTGGATTTGTGAAAGGTGTTGTTGATTCTGATGACTTGCCGCTCAACATTTCTCGTGAGATGCTGC AACAGAACAAAATCTTGAAGGTCATCAGGAAGAATCTTGTGAAGAAGTGCATTGAGATGTTCAATGAGATTGCTGAGAAC AAGGAAGACTACAACAAGTTCTATGATGCTTTCTCCAAGAATTTGAAGCTGGGTATCCATGAGGATAGTCAGAACAGGGT CAAATTAGCTGATTTGCTCAGATACCACTCTACAAAAAGTGGAGATGAGTTGACAAGCTTGAAGGACTATGTTACCAGAA TGAAGGAGGGCCAGAAAGACATCTACTACATTACTGGAGAGAGCAAAAAGGCTGTGGAGAATTCTCCATTTTTGGAGAGA CTGAAGAAGAAGGGCTATGAGGTGCTTTTCATGGTGGACGCCATTGATGAGTATGCTGTTGGACAACTTAAAGAGTACGA TGGCAAAAAATTGGTTTCAGCTACAAAGGAAGGATTGAAATTGGACGATGAGACTGAGGAGGAGAAAAAGAAAAAGGAGG AGAAGAAGAAGTCATTTGAGGATCTCTGCAAAGTCATCAAGGAAATCTTGGGAGATAAAGTTGAGAAGTGCAAACATGGA GAGGATCATGAAGGCTCAGGCTCTGAGAGATAG
Protein sequence (LotjaGi2g1v0124300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQPELFIRLVPDKDNKTLSIID SGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVT RDVEGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEEVDEE EEKESKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFAVEGQLEFKAILFVPKRAPFD LFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAEN KEDYNKFYDAFSKNLKLGIHEDSQNRVKLADLLRYHSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLER LKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFEDLCKVIKEILGDKVEKCKHG EDHEGSGSER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 242 | 242 | 0.0 | ||
| PIRSF | 1 | 562 | 562 | 2.2E-223 | ||
| PANTHER | 1 | 242 | 242 | 0.0 | – | |
| Hamap | 2 | 570 | 569 | 22.55 | ||
| PRINTS | 5 | 25 | 21 | 9.8E-85 | ||
| Gene3D | 5 | 210 | 206 | 3.7E-108 | ||
| SUPERFAMILY | 5 | 213 | 209 | 9.04E-77 | ||
| CDD | 14 | 202 | 189 | 8.55388E-112 | – | |
| ProSitePatterns | 25 | 34 | 10 | - | ||
| PRINTS | 26 | 48 | 23 | 9.8E-85 | ||
| SMART | 27 | 182 | 156 | 6.9E-11 | ||
| Pfam | 27 | 181 | 155 | 1.1E-15 | ||
| PRINTS | 75 | 92 | 18 | 9.8E-85 | ||
| PRINTS | 93 | 110 | 18 | 9.8E-85 | ||
| PRINTS | 118 | 140 | 23 | 9.8E-85 | ||
| PRINTS | 170 | 187 | 18 | 9.8E-85 | ||
| Pfam | 184 | 558 | 375 | 2.3E-179 | ||
| PRINTS | 188 | 206 | 19 | 9.8E-85 | ||
| Gene3D | 211 | 252 | 42 | 3.7E-108 | – | |
| MobiDBLite | 215 | 247 | 33 | - | – | |
| MobiDBLite | 217 | 240 | 24 | - | – | |
| Coils | 227 | 256 | 30 | - | – | |
| PANTHER | 243 | 557 | 315 | 0.0 | ||
| PANTHER | 243 | 557 | 315 | 0.0 | – | |
| Gene3D | 261 | 434 | 174 | 7.0E-82 | – | |
| SUPERFAMILY | 262 | 517 | 256 | 1.82E-109 | ||
| Gene3D | 435 | 522 | 88 | 9.8E-42 | – | |
| Coils | 522 | 542 | 21 | - | – | |
| Gene3D | 523 | 564 | 42 | 3.9E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi2g1v0124300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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