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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0131700 |
| Transcript ID | LotjaGi2g1v0131700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein family; TAIR: AT4G03500.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q8LPS2|ACD6_ARATH Protein ACCELERATED CELL DEATH 6; TrEMBL-Plants: tr|V7BT88|V7BT88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0131700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:47686208..47689469) extracted from Lotus japonicus Gifu genome v1.2.
GCTAAGCACGTCGAAGGATTTCAGCGTTCTATTCCATTGTATGAGTGCTGGTGCTAGTAAAACTTCTCTGTCTTACCAAG GAGGAAACGTCAAATTTCAAAGCATTCGAGGTTCGCATCTGTACTTTCATATAACTTACTCGAGCATAATTTTATTTTAT CAAAATACGTGTTCTCCTGAACAGAAAATTCTACTTCTTGGACAATTAGTATCCCATCGCCATCTACTTGTTTTCCCCAT TCAATTTCTCTTGAGTGCGCACGATGCAAGCGATAATTCAATTCGTAGTAATCTTTTACTATTGCTCTCCATCTTAGAGG GGTAGCAGTGTAGCCCCTCTAAATCACACATTTCATTTTCATGATTGAACAATTAATTGAAAACAAAGTCAATGGTTAAT ATTTTCATGAGAGAGGTTGGGGAGAGACACTACACGAAATGATCAAAATTACATTTTTACTGTATTAATACTTGGACAGT TGGACATTTATGCCGTTGATAACTCACACATTGATTAGAAATATGACTAAGATAATCAGAATATATGATAAGGCAATCCT CAACTTGTGACTTAGCTTAACTTTTTGGATTGAGATATTGTAGATTTTAATATAGTATGAGAGTCTATCATAAATCTGCT TTAGATGAGTGGTGTGTCGAAAAGTCTCACATTAACTAACTTATGGCTTGTGTTAGATCTCGCTAATTCTAATAGGTGTA TTTTGGTTGAATTTATTTATCAAAGGAAAAACTAATTGTCTGTTGAGGTTCAGGGAGCATAATGGGGGCGTCAAAACGTG ATAGTATGAGTGGTGAACATTACAGGAAGGTAGAGAATTTTGAAAGCAAAACTCCCTCTGAGTCAGAAATAGAAGCCACA GCCGGACACCCTCATGACAACACTTTGGATCTACAAAGCCCTCAAATCCGGACCATTTTAGGTTTGGTAGAAGACTGTGA TAAATGCACAGATAAGATATGTCAATTCATTGAAGGACCCAAAAATGACATTGCTGGTGATGGTGAAATGCAAGAGGGTC TCGTTGAGTTCGTTAAAGAAAAACATGGACACAATAAGAACAACTGGAAGTTGCTAAGAGATGCGTATCTTTCAAAGAAA GATTATAACAAAATTAATAATCTTTCTAATTTATGGAATGATCTCCTTGAAAGTGAGATTTTCGAGCAGAAATCCCCTGT GGGAAATACGGTGTTACACATAGCTGCTGAGAATGGAGATGAAGACCTTGTGGAGGAGATTGTTCGTCAAGCCCCTTATC TGTTGACTGAAAAAAGTTTCAGTGGTGATACTGCACTGCATGTTGCTGCTAAAACTGGCCACTTCTCTGCTCTTCAGAAG TTGATTGTTGCTCACTTCAAAAATTCATCAGAAAGTTATTACAAAATCCAGGAGGCAGAGGAGAAGGCTCTGGAGAAAAT CCTTGAGAAAAACAATGATGGAAATACATTCTTCCACGAGGCCTTAATCAATGGTCGCCATGGAGTGATGAATTTCCTGC TTTCTCATGGTGATAGTAATTTGAAAAAAGTGGCTAAGGGAGCTGCGTTATCCGTGACGAGTAATGAAAAGAAATCAGGT GTGTATTTGGCAATTGAGTCTGGCTACAAGCATGTTGTTGATCAAGCATTAAGTGATGTAATTCCAAAACACTCAAACTA TATTCCTCAAGGAAAATCTCTTCTTCTTGCAGCAATCATCAAAGAGGATCAAGGTAAGCGCGTACATATCTAAGTTTCAT ATGCTTACTTGTTCGTTACTTGAATTAAAATTTATAAATTAAGTTGCACTTTTTCATGATTTTTAACTTCCTTCTTAAAT TAGACTACGTACTAATAGTTGTGAAATATATGGTAGATATTTTAGAGACTATATTGGCAAAAATGCCCAAATGGATCCAT TTATCGGACACCCAAGGAAGAATTCCTCTACATTATGCTGCTTCAACAGGTTATCTTAAAGGTGTTCAGAATCTGCTTAA AAAATGTGATTTCTTCGTCATGGAAATGGACAAAAATGGATTTTTGCCAATTCATTTGGCTTCTTGCACTGGCCAGGTTA AAGTAGTTCAGGAATTGTTGAAATCAGACTACTGCCCGGATCCAAGAGATATAGTTCACAAGGATGGCCGAAATATTCTT CATCTTGCAGCTCAAAGTGGAAAGTTTAATGTTGTAAAGTACATCTTGCACGCTTCTTCTTCTTCTTCTTCTAATCATGG ACTTGTAAAGATGATAAATGAGCAGGACTGTAATGGAAACACTCCTTTGCATTTGGCTACCATGTATTGCCATCCCAAAA TAGTGCATACCTTGACATGGGATAAAAGAGTGGATCTTTGTTTGGTTAACAGAAAAGGTCAAACAGCTCTTGATGTTTTT GGGTATTCTGGAAATCCCTCCCTTAGACAGGTAAGTGTCTTTCCCCAATGTTCATAAAATTAATTTTATGTGGGTCAGTA GTCAAGTTAAATCTATATTTATCATTTGAAATTAAGTTGGTAACAAATTTTAATTTACAGAGGCTAACATGGACTGCATT AAAATCTTCTGGTGTACGATCTGCTGAGCCAAAGTCATTGGCAGCCATGGTCCCTCCAGAAACTACATACATCAATTTAT TGCAGCAAGAGGGTACAGACATGGATCCGTACAAAGATAGAATCAACACACTTATAGTGGTTTCAACCCTTATAATTACA GCAACATTCGCCACAGGTTTCGCATTGCCCGGGGGTATTAATGGCTCAGGTGATCCAGGGCCAGGTATGGCTGTGATGCT ACATCACATATGGTTTAAAATATTCATCTTTTGCAATACAATATCAATGTACGGTGCAATTAGTGTCACCATCATTCTCA TTTGGGCCCAGCTGGGAGATATTACTTTGGCACTCCTTGCGCTTAAAGTTGCAAGACCTCTTCTTGGAATAACTCTTGCG ACACTGTCTCTGGCATTTTTGGCTGGGGTGCACCTAGTTATAAGGGATCTAACTTGGCTAGACACTTCTTTCTTGGCCAT GGGCTTGTTTTTCATCTTCATGTTGTTGTTGCTGTACACTATGCTCTGGTTCCCCTCATCAACTAGCAAACTAGTTCTCA GACATATATCCTACTACCCCTTTCTACTGCTGGCATCATTGGTTGAACCTGATCAAGACTAGTTCTTAGGTTTAAAGAAT GATGTAGCAACTAAAATCATTATGACATTATTAAAGGCATTTATCTCATTTATCGACTTTTA
CDS sequence (LotjaGi2g1v0131700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGCGTCAAAACGTGATAGTATGAGTGGTGAACATTACAGGAAGGTAGAGAATTTTGAAAGCAAAACTCCCTCTGA GTCAGAAATAGAAGCCACAGCCGGACACCCTCATGACAACACTTTGGATCTACAAAGCCCTCAAATCCGGACCATTTTAG GTTTGGTAGAAGACTGTGATAAATGCACAGATAAGATATGTCAATTCATTGAAGGACCCAAAAATGACATTGCTGGTGAT GGTGAAATGCAAGAGGGTCTCGTTGAGTTCGTTAAAGAAAAACATGGACACAATAAGAACAACTGGAAGTTGCTAAGAGA TGCGTATCTTTCAAAGAAAGATTATAACAAAATTAATAATCTTTCTAATTTATGGAATGATCTCCTTGAAAGTGAGATTT TCGAGCAGAAATCCCCTGTGGGAAATACGGTGTTACACATAGCTGCTGAGAATGGAGATGAAGACCTTGTGGAGGAGATT GTTCGTCAAGCCCCTTATCTGTTGACTGAAAAAAGTTTCAGTGGTGATACTGCACTGCATGTTGCTGCTAAAACTGGCCA CTTCTCTGCTCTTCAGAAGTTGATTGTTGCTCACTTCAAAAATTCATCAGAAAGTTATTACAAAATCCAGGAGGCAGAGG AGAAGGCTCTGGAGAAAATCCTTGAGAAAAACAATGATGGAAATACATTCTTCCACGAGGCCTTAATCAATGGTCGCCAT GGAGTGATGAATTTCCTGCTTTCTCATGGTGATAGTAATTTGAAAAAAGTGGCTAAGGGAGCTGCGTTATCCGTGACGAG TAATGAAAAGAAATCAGGTGTGTATTTGGCAATTGAGTCTGGCTACAAGCATGTTGTTGATCAAGCATTAAGTGATGTAA TTCCAAAACACTCAAACTATATTCCTCAAGGAAAATCTCTTCTTCTTGCAGCAATCATCAAAGAGGATCAAGATATTTTA GAGACTATATTGGCAAAAATGCCCAAATGGATCCATTTATCGGACACCCAAGGAAGAATTCCTCTACATTATGCTGCTTC AACAGGTTATCTTAAAGGTGTTCAGAATCTGCTTAAAAAATGTGATTTCTTCGTCATGGAAATGGACAAAAATGGATTTT TGCCAATTCATTTGGCTTCTTGCACTGGCCAGGTTAAAGTAGTTCAGGAATTGTTGAAATCAGACTACTGCCCGGATCCA AGAGATATAGTTCACAAGGATGGCCGAAATATTCTTCATCTTGCAGCTCAAAGTGGAAAGTTTAATGTTGTAAAGTACAT CTTGCACGCTTCTTCTTCTTCTTCTTCTAATCATGGACTTGTAAAGATGATAAATGAGCAGGACTGTAATGGAAACACTC CTTTGCATTTGGCTACCATGTATTGCCATCCCAAAATAGTGCATACCTTGACATGGGATAAAAGAGTGGATCTTTGTTTG GTTAACAGAAAAGGTCAAACAGCTCTTGATGTTTTTGGGTATTCTGGAAATCCCTCCCTTAGACAGAGGCTAACATGGAC TGCATTAAAATCTTCTGGTGTACGATCTGCTGAGCCAAAGTCATTGGCAGCCATGGTCCCTCCAGAAACTACATACATCA ATTTATTGCAGCAAGAGGGTACAGACATGGATCCGTACAAAGATAGAATCAACACACTTATAGTGGTTTCAACCCTTATA ATTACAGCAACATTCGCCACAGGTTTCGCATTGCCCGGGGGTATTAATGGCTCAGGTGATCCAGGGCCAGGTATGGCTGT GATGCTACATCACATATGGTTTAAAATATTCATCTTTTGCAATACAATATCAATGTACGGTGCAATTAGTGTCACCATCA TTCTCATTTGGGCCCAGCTGGGAGATATTACTTTGGCACTCCTTGCGCTTAAAGTTGCAAGACCTCTTCTTGGAATAACT CTTGCGACACTGTCTCTGGCATTTTTGGCTGGGGTGCACCTAGTTATAAGGGATCTAACTTGGCTAGACACTTCTTTCTT GGCCATGGGCTTGTTTTTCATCTTCATGTTGTTGTTGCTGTACACTATGCTCTGGTTCCCCTCATCAACTAGCAAACTAG TTCTCAGACATATATCCTACTACCCCTTTCTACTGCTGGCATCATTGGTTGAACCTGATCAAGACTAG
Protein sequence (LotjaGi2g1v0131700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGASKRDSMSGEHYRKVENFESKTPSESEIEATAGHPHDNTLDLQSPQIRTILGLVEDCDKCTDKICQFIEGPKNDIAGD GEMQEGLVEFVKEKHGHNKNNWKLLRDAYLSKKDYNKINNLSNLWNDLLESEIFEQKSPVGNTVLHIAAENGDEDLVEEI VRQAPYLLTEKSFSGDTALHVAAKTGHFSALQKLIVAHFKNSSESYYKIQEAEEKALEKILEKNNDGNTFFHEALINGRH GVMNFLLSHGDSNLKKVAKGAALSVTSNEKKSGVYLAIESGYKHVVDQALSDVIPKHSNYIPQGKSLLLAAIIKEDQDIL ETILAKMPKWIHLSDTQGRIPLHYAASTGYLKGVQNLLKKCDFFVMEMDKNGFLPIHLASCTGQVKVVQELLKSDYCPDP RDIVHKDGRNILHLAAQSGKFNVVKYILHASSSSSSNHGLVKMINEQDCNGNTPLHLATMYCHPKIVHTLTWDKRVDLCL VNRKGQTALDVFGYSGNPSLRQRLTWTALKSSGVRSAEPKSLAAMVPPETTYINLLQQEGTDMDPYKDRINTLIVVSTLI ITATFATGFALPGGINGSGDPGPGMAVMLHHIWFKIFIFCNTISMYGAISVTIILIWAQLGDITLALLALKVARPLLGIT LATLSLAFLAGVHLVIRDLTWLDTSFLAMGLFFIFMLLLLYTMLWFPSSTSKLVLRHISYYPFLLLASLVEPDQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 43 | 43 | - | – | |
| Phobius | 1 | 552 | 552 | - | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| Gene3D | 98 | 292 | 195 | 1.3E-19 | ||
| PANTHER | 134 | 700 | 567 | 1.3E-82 | – | |
| PANTHER | 134 | 700 | 567 | 1.3E-82 | – | |
| SUPERFAMILY | 135 | 491 | 357 | 1.46E-45 | ||
| SMART | 140 | 170 | 31 | 0.39 | ||
| ProSiteProfiles | 140 | 504 | 365 | 37.984 | ||
| Pfam | 145 | 255 | 111 | 2.4E-9 | ||
| SMART | 174 | 204 | 31 | 16.0 | ||
| ProSiteProfiles | 174 | 195 | 22 | 9.057 | ||
| SMART | 226 | 256 | 31 | 0.031 | ||
| SMART | 269 | 298 | 30 | 2600.0 | ||
| Pfam | 276 | 362 | 87 | 1.8E-7 | ||
| Gene3D | 302 | 399 | 98 | 4.5E-13 | ||
| SMART | 303 | 333 | 31 | 290.0 | ||
| SMART | 337 | 365 | 29 | 0.37 | ||
| SMART | 371 | 402 | 32 | 0.36 | ||
| ProSiteProfiles | 371 | 403 | 33 | 8.763 | ||
| Pfam | 376 | 478 | 103 | 4.4E-12 | ||
| Gene3D | 400 | 505 | 106 | 1.1E-20 | ||
| ProSiteProfiles | 407 | 439 | 33 | 9.805 | ||
| SMART | 407 | 436 | 30 | 0.074 | ||
| SMART | 450 | 480 | 31 | 16.0 | ||
| Pfam | 546 | 654 | 109 | 7.9E-23 | ||
| TMHMM | 553 | 575 | 23 | - | – | |
| Phobius | 553 | 572 | 20 | - | – | |
| Phobius | 573 | 591 | 19 | - | – | |
| Phobius | 592 | 620 | 29 | - | – | |
| TMHMM | 596 | 618 | 23 | - | – | |
| Phobius | 621 | 631 | 11 | - | – | |
| Phobius | 632 | 654 | 23 | - | – | |
| TMHMM | 633 | 655 | 23 | - | – | |
| Phobius | 655 | 665 | 11 | - | – | |
| TMHMM | 664 | 686 | 23 | - | – | |
| Phobius | 666 | 686 | 21 | - | – | |
| Phobius | 687 | 692 | 6 | - | – | |
| Phobius | 693 | 710 | 18 | - | – | |
| Phobius | 711 | 715 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0131700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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