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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0146700 |
| Transcript ID | LotjaGi2g1v0146700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine zipper protein; TAIR: AT3G61150.1 homeodomain GLABROUS 1; Swiss-Prot: sp|Q9M2E8|HDG1_ARATH Homeobox-leucine zipper protein HDG1; TrEMBL-Plants: tr|A0A151U6K6|A0A151U6K6_CAJCA Homeobox-leucine zipper protein ANTHOCYANINLESS 2; Found in the gene: LotjaGi2g1v0146700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52761679..52766048) extracted from Lotus japonicus Gifu genome v1.2.
CAGCAAAGCAAAATGGAGGGCAACAAAGAGATGGGTCTCATTGGAGAAAATTTTGATTCTGGTTTGATGGGAGGGGCGAG GGATGATGAGTATGAAAGCAGGTCTGGAAGTGACAATTTTGATGTCGCATCAGGTGATGATCAAGATGCAGGTGATGACC AGCCACCACAGAAGAAGAAAAAGAAATATCATAGACATACTCCTCAACAAATTCACGAGCTTGAAACGTAAGACTATGAA ATTTTGCTATTTTCGTATTATCATTGACATGTTTGCTAGAGCTGATCATTTTGGCTTTTGTCCCGAGTTGTTTTTAGTTT CTTCAAGGGGTGTCCTCATCCTGATGAGAAGCAAAGATCAGATCTTAGTAAGACACTAGGGTTAGAGAACAAAAAAGTCA AGTTCTGGTTTCAGAATAGGAGAACCCAAATGAAGGTAAGCTTTAATGTTATTAGTGTTCGTGCACTTGTTTTTTAGTTT GTTATGTAATTTGGAAGCTTAACTAAATCACTTTTTTCTTTAATCAGACACAACTAGAACGTCAAGAAAACATGATTCTT AAGCAAGAAAATGAAAAGCTCCGAGCAGAGAACAATATGATGCAGGAAGCTATATCAAATCCATCATGCAACACTTGTGG TGGCCCTGCCATTCTTGGTCAAATTTCATTGGAGGGGCACCAAATTAGAATTGAGAATGCTCGACTGAAAGATGAATTGA ATCGGACGGGTGCCTTAGTAAGCAAGTTCTTGGGCCGGCCCCTCTCTTCATTGGGCTCTCCCATGGCTCTCTCAACCCCA AATTTCGGTCTAGAAATTGGTTTTGGAAAAAATGGGGTTGCTGATACAAGCAATTTTAGCATGTCCTTGCCAGCGGGACT TGACATGGGAGATGGAGTTTTTGGCGCTCCACCAGCCACACTTTCTGGGACTAGATCACCAATGGGAATGATGGGAAATG AAGCCCAGGTTGAGGGATCTACGCTTACGCATCTTGCATTAGCTGCTATGGATGAATTAATTAAGATGGCTCAGATAGAT AGCCCTCTTTGGATTAAGAGTTCAAGTGGGGGGCAGGAAGTGCTGAACCAAGAGGAGTATGCAAAGATTTGTTCTCCTTA TACCGGTTCAAAACCCGCTGGTTATGTAACTGAAGTTTCAAGAGAAACTAGGGTAGTAATGATCAACAGTTTGGCCCTGG TGGACACATTTATGGATGCGGTATGATAGCCAATTGGAAACAAATTAAATTCTCTCAATTGTAAAAAAATTGTCCATATC AAGTTTCACTATCTCACCCTTGATTTTTGTGTAGTTAATAATTGAAAAGTAAAATGATTAGACAGTGAAAGTTGACATGA TGAAGTCCTAGCGAACTTCTTATATACTCTTGCATGAATAATTTGATGTGGTTGCCTATAATTATCATAATTTAGCCTTG AGTATTCATGAATAATTATTTATTTGTATCTACAGGATCGATGGTTACAGATGTTTCCATCTATGATTACTAGAGCTGTC ACCATGGATGCGATATCTAGTGACACGGCCGGAACTGGAGCTTTGCAATTGGTATGCTTCTATGCTCAATTATTTAGTTT TGCTTGATATGCTATTAGCTTGAGTTGACTAGGATTAATTACTGCTTTTTCAGATGCATGCTGAGCTACAATTGCCTTCT CCACTAGTCCCGGTTCGCCAATTGAATTTCCTCCGGTTTTGCAAGCAGCACAGAGAAGGTGTGTGGGTTGTTGTTGATGT ATCAGTTGACTTTGGTCGCAATGCCGCCAATTCGAATCCTTTCATGAACTGTAGGAGGCTTCCTTCTGGATGTGTTGTGC AGGATACACCCGAAGGCATGTCCAAGGTAGGTGCTGCTTTAAATTGCTTTAAGCACTTATTTAATAGTTTGAAGACTTCA TGTTTCATGATTTATGTTTGGCATCTTAGTATTCTGAGGTGCACAAAAAGTTTAAAGTCTTGGGATTTTCAGCCTTTCCT ATGTAAATAATTTAGTTGATCTTTCCATTTCTGTATGAGTGCATATTCTTTTCTGTATCCAAGACTGTAAGGAACTAAAT CCAGCCCAATCCCATAATTTAACTGTGCCAGGTTATGACAATTTGTGTCAATTGATCATTCAACCAGCCCTACATTTTTA TCATATTAAAAAATGTATAAATTGTGATTTATAGGTTTTTGTTTTCCACTTATTTATTTCAACGTGAATACTTTGTTATC AAGTGTTGTCTATGGTTACTTTATGGAATAGACCTCTCTATAAATTTCATTGATCTTTAATTCTTGCAATATTTTGCTTC AACTTTTTTTCATGTGGATTTTAATGCTACCCTAATTTTACATTTGACGTATGTTTTGGTTATATTTGTAAAATTACGTG ACTGATAAAATTGATTGTTGTTCTAGTTCTTGTGAAACATTTAAGATAACAGGATTTATGATAGCTTAATTAAATTTTTC TTATGATTGTATGGAATATGTTTTTTAATGAAGTTTCACTATTGCAGATTACTTGGGTTGATCATTCCCAATATGATGAA AATGTTATCCATCAAATGTATCGCCCTTTGGTGAATTCCGGCATTGGCTTTGGTGCTCATAGATGGGTCGCAACTCTTCA AAGACAGTGTGAATGCCTTGCAATGCTCATGTCCCCTTCAATACCATCTGAGGTCTCCCCTGGTATGTGTCTATATATAC ATATATGTCACATTGGCACTGTCACATGCATATTGACAAACATGTCACATATTCATTCTTCCTTGTAGTAATAAACCAAG ATGGTAGGAGAAGCATGCTGAGGCTGGCGCAACGCATGACAAATTCCTTCTGGTCGGGGGTCTGTCCCTCATCTGCCAGT AAGTGGGAAATTCTTCACATTGGTAACAATAACACAAGGTTTATGTCTCGGAAACATGTGGATTACTCTGGAGAGGCTAC TAGCATTGTCCTTAGTGCTGCAACTTCTGTTTGGTTGCCGGTATCGCGACAAAGGGTGTTTGATTTTCTGCGTGATGGAC AAAATAGAGGCAAATGGGACATCTTTTCTAGTGGTGTAACAAATCAGGAGATGCACCATGTTATCAAAGGGCAAGGACAA GGAAATTGTGTTTCTGTACTTGGAGCTAGTAATAATGTAAGTACAGTCATTTACATTAAGCACTTTTGTCATGAACCAAT TAAGGTTAAGCTGTTATACGAAGATTTTTACCATTACGACTTTGATATATTCACTACCATTCTATTCAATTGCATGTGTT TCAACATAACATAACATCAGTGTTTCAATAACAAGTGTTCCATACTCATTTTCTAATCACATGAGAAGAAACAGATATGA TAGACATGCGATGTGAAAGAAATGGATAGATAGAGATGAAAAATAAATAAATAAAATATCAACTTTAATTGTTATACAGT ACCCATATAGTAGTTCCATTTATTGTCTATCTTTTTTTCTTCTATCATCTCGTATTATCATATGTTTTACATTTTTCCTT ACTTTTTTCTCTATCTACCTCTCAGTGTCTTACTACATTACTCATCATATTATCTGCTTCTCTTATTTTTTTGTTGCCTT CCATTTGGAGTGTATACACCCCATTATAAGTGGTGCGATCAATATCATTCTCATGTAATTAAGTTATTTTGCATGTTTAT TTCAAGTGTTCATAAGAATATCATCACCTTACCTTTAACATTTTTTTTAGGCTGCTAATGGCAATGATAGAAAATTATGG CTGCAAGATTCATGGACCGATACATCTGGTTCGATGATAGTGTATTCCTCCATCGACGTTCAGTCCTTTAACATTGTGGC AAGTGGTCAAGATTCTGCATATATTTCTCTATTTCCTTCTGGATTTTCCATTCTTCCAGATGGTCATTCAAACAACAATT GCGTTGGGACTTCAACCAATGGCAGCAACGGTGGCGCCGGCAACACCAATGCAGGTGGATGCTTGCTTACATTTGGGATA CAAATGCAAAACAACCTCCCAACAACTATGCTTACAATGGAGTCCGTTGATACTATTAATAGGCACCTCTCAAGCACCAT TCAAAAGATCAAGATGCACACGGAGTTGGGCATGAATGAAGCTTTCTTTGATTCAAGTGAAATTTAGTTATTTTTTCTTT TTCTTTTTCTTTTGAAAATGAAAAACTGAAAAAGGGTGATACATTTTTATGTATAGGGAATTCAAGTATGAAACTGGAAT TTAGAGCATCACGATTTAGTTTTGTGAGTGGTATGAGTATTGACTTGTAGGTGGGAGTTACGTTCTTGGTTTCACCGCTT TTATTTGTCCAGTATGCTATTCATGTATGCATACCTTGCTTACAGCTAGC
CDS sequence (LotjaGi2g1v0146700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGGCAACAAAGAGATGGGTCTCATTGGAGAAAATTTTGATTCTGGTTTGATGGGAGGGGCGAGGGATGATGAGTA TGAAAGCAGGTCTGGAAGTGACAATTTTGATGTCGCATCAGGTGATGATCAAGATGCAGGTGATGACCAGCCACCACAGA AGAAGAAAAAGAAATATCATAGACATACTCCTCAACAAATTCACGAGCTTGAAACTTTCTTCAAGGGGTGTCCTCATCCT GATGAGAAGCAAAGATCAGATCTTAGTAAGACACTAGGGTTAGAGAACAAAAAAGTCAAGTTCTGGTTTCAGAATAGGAG AACCCAAATGAAGACACAACTAGAACGTCAAGAAAACATGATTCTTAAGCAAGAAAATGAAAAGCTCCGAGCAGAGAACA ATATGATGCAGGAAGCTATATCAAATCCATCATGCAACACTTGTGGTGGCCCTGCCATTCTTGGTCAAATTTCATTGGAG GGGCACCAAATTAGAATTGAGAATGCTCGACTGAAAGATGAATTGAATCGGACGGGTGCCTTAGTAAGCAAGTTCTTGGG CCGGCCCCTCTCTTCATTGGGCTCTCCCATGGCTCTCTCAACCCCAAATTTCGGTCTAGAAATTGGTTTTGGAAAAAATG GGGTTGCTGATACAAGCAATTTTAGCATGTCCTTGCCAGCGGGACTTGACATGGGAGATGGAGTTTTTGGCGCTCCACCA GCCACACTTTCTGGGACTAGATCACCAATGGGAATGATGGGAAATGAAGCCCAGGTTGAGGGATCTACGCTTACGCATCT TGCATTAGCTGCTATGGATGAATTAATTAAGATGGCTCAGATAGATAGCCCTCTTTGGATTAAGAGTTCAAGTGGGGGGC AGGAAGTGCTGAACCAAGAGGAGTATGCAAAGATTTGTTCTCCTTATACCGGTTCAAAACCCGCTGGTTATGTAACTGAA GTTTCAAGAGAAACTAGGGTAGTAATGATCAACAGTTTGGCCCTGGTGGACACATTTATGGATGCGGATCGATGGTTACA GATGTTTCCATCTATGATTACTAGAGCTGTCACCATGGATGCGATATCTAGTGACACGGCCGGAACTGGAGCTTTGCAAT TGATGCATGCTGAGCTACAATTGCCTTCTCCACTAGTCCCGGTTCGCCAATTGAATTTCCTCCGGTTTTGCAAGCAGCAC AGAGAAGGTGTGTGGGTTGTTGTTGATGTATCAGTTGACTTTGGTCGCAATGCCGCCAATTCGAATCCTTTCATGAACTG TAGGAGGCTTCCTTCTGGATGTGTTGTGCAGGATACACCCGAAGGCATGTCCAAGATTACTTGGGTTGATCATTCCCAAT ATGATGAAAATGTTATCCATCAAATGTATCGCCCTTTGGTGAATTCCGGCATTGGCTTTGGTGCTCATAGATGGGTCGCA ACTCTTCAAAGACAGTGTGAATGCCTTGCAATGCTCATGTCCCCTTCAATACCATCTGAGGTCTCCCCTGTAATAAACCA AGATGGTAGGAGAAGCATGCTGAGGCTGGCGCAACGCATGACAAATTCCTTCTGGTCGGGGGTCTGTCCCTCATCTGCCA GTAAGTGGGAAATTCTTCACATTGGTAACAATAACACAAGGTTTATGTCTCGGAAACATGTGGATTACTCTGGAGAGGCT ACTAGCATTGTCCTTAGTGCTGCAACTTCTGTTTGGTTGCCGGTATCGCGACAAAGGGTGTTTGATTTTCTGCGTGATGG ACAAAATAGAGGCAAATGGGACATCTTTTCTAGTGGTGTAACAAATCAGGAGATGCACCATGTTATCAAAGGGCAAGGAC AAGGAAATTGTGTTTCTGTACTTGGAGCTAGTAATAATGCTGCTAATGGCAATGATAGAAAATTATGGCTGCAAGATTCA TGGACCGATACATCTGGTTCGATGATAGTGTATTCCTCCATCGACGTTCAGTCCTTTAACATTGTGGCAAGTGGTCAAGA TTCTGCATATATTTCTCTATTTCCTTCTGGATTTTCCATTCTTCCAGATGGTCATTCAAACAACAATTGCGTTGGGACTT CAACCAATGGCAGCAACGGTGGCGCCGGCAACACCAATGCAGGTGGATGCTTGCTTACATTTGGGATACAAATGCAAAAC AACCTCCCAACAACTATGCTTACAATGGAGTCCGTTGATACTATTAATAGGCACCTCTCAAGCACCATTCAAAAGATCAA GATGCACACGGAGTTGGGCATGAATGAAGCTTTCTTTGATTCAAGTGAAATTTAG
Protein sequence (LotjaGi2g1v0146700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGNKEMGLIGENFDSGLMGGARDDEYESRSGSDNFDVASGDDQDAGDDQPPQKKKKKYHRHTPQQIHELETFFKGCPHP DEKQRSDLSKTLGLENKKVKFWFQNRRTQMKTQLERQENMILKQENEKLRAENNMMQEAISNPSCNTCGGPAILGQISLE GHQIRIENARLKDELNRTGALVSKFLGRPLSSLGSPMALSTPNFGLEIGFGKNGVADTSNFSMSLPAGLDMGDGVFGAPP ATLSGTRSPMGMMGNEAQVEGSTLTHLALAAMDELIKMAQIDSPLWIKSSSGGQEVLNQEEYAKICSPYTGSKPAGYVTE VSRETRVVMINSLALVDTFMDADRWLQMFPSMITRAVTMDAISSDTAGTGALQLMHAELQLPSPLVPVRQLNFLRFCKQH REGVWVVVDVSVDFGRNAANSNPFMNCRRLPSGCVVQDTPEGMSKITWVDHSQYDENVIHQMYRPLVNSGIGFGAHRWVA TLQRQCECLAMLMSPSIPSEVSPVINQDGRRSMLRLAQRMTNSFWSGVCPSSASKWEILHIGNNNTRFMSRKHVDYSGEA TSIVLSAATSVWLPVSRQRVFDFLRDGQNRGKWDIFSSGVTNQEMHHVIKGQGQGNCVSVLGASNNAANGNDRKLWLQDS WTDTSGSMIVYSSIDVQSFNIVASGQDSAYISLFPSGFSILPDGHSNNNCVGTSTNGSNGGAGNTNAGGCLLTFGIQMQN NLPTTMLTMESVDTINRHLSSTIQKIKMHTELGMNEAFFDSSEI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 64 | 64 | - | – | |
| PANTHER | 8 | 748 | 741 | 0.0 | ||
| PANTHER | 8 | 748 | 741 | 0.0 | – | |
| Gene3D | 39 | 115 | 77 | 6.6E-19 | – | |
| SUPERFAMILY | 43 | 113 | 71 | 9.41E-19 | ||
| ProSiteProfiles | 53 | 113 | 61 | 17.038 | ||
| SMART | 55 | 117 | 63 | 4.5E-17 | ||
| Pfam | 56 | 111 | 56 | 1.4E-18 | ||
| CDD | 60 | 113 | 54 | 6.32632E-16 | ||
| ProSitePatterns | 88 | 111 | 24 | - | ||
| Coils | 107 | 142 | 36 | - | – | |
| ProSiteProfiles | 257 | 491 | 235 | 43.642 | ||
| CDD | 262 | 487 | 226 | 5.03665E-96 | – | |
| SUPERFAMILY | 262 | 488 | 227 | 3.14E-31 | – | |
| SMART | 266 | 488 | 223 | 3.6E-35 | ||
| Pfam | 267 | 488 | 222 | 2.1E-50 | ||
| SUPERFAMILY | 516 | 745 | 230 | 5.56E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi2g1v0146700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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