Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi2g1v0152900.2

Overview

Field Value
Gene ID LotjaGi2g1v0152900
Transcript ID LotjaGi2g1v0152900.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G52540.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|A0A0S3TC73|A0A0S3TC73_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0152900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:55024285..55027574) extracted from Lotus japonicus Gifu genome v1.2.

GTCAAAAATGGCTGCTAATTGATGTGTTCGAAAAGTGTTACATGATTTTGAATGTCTATGTTAAAAATCTTATAATAAAA TAAAATGCTCAAGTGTGTAGTTGTTGCAACCCTAACAGGACTATAAATGTGACAGTTTCCAATGGAAGAGGTAGCTCGCC GAAGCCAGCAAACATTACCATTTTGTGTTTCTATCATTAACCTTCAGATTCTTCTTGGAAGAAATGTACTTGAAACGTTA TTGTTGTTTCCCCTCAGACAATGAGCAAAGCAAACTTAAGTATGGTAAATTTTTATCAAACATAATTGTATGTTTTATCA CAAATTAATATCAGTTTCACAAGTTATCTGTGGATTTTTTGTTTTTACTGACAATAGGTTTGACAGCAATAGGGACTATC CATGGGAAATGTACACCTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCACGATAATAAGATTGGAGAGGGTGGA TTTGGAAGTGTTTATTTTGGTCGAACAATTGAAGGCATTGAGGTTTGTGTTTGAGGTTATAGTTATACAATACAACCCAT CTTTTAGATCTCAATTTGAATTATGTTTGTGTTTAAAGTTAGCATTAGACATTTTTGAGCATGCATAACAGAGATTTTCA TGACTGAGTAATAATGGAATTTGCGCGCAGATTGCGGTGAAGCGGTTGAAGATGATGACGGCGAAGGCGGAGATGGAGTT TGCAGTAGAAGTGGAAGTACTTGGAAGAGTGAGGCATAAAAATTTGTTGGGATTGAGGGGTTACTATGCAGGGGAAAATG AAAGGTTAATTGTGTATGATTACATGCCAAATCATAGTTTGCTCACTCATTTGCATGGTCCACTCTCTAAGGAATGTCAT CTAGATTGGAGTAGAAGGATGAGTATTGCAATTGGAGCTGCTGAAGCTGTGGCGTAAGTGTAACTTACCCTCTCTGTATT TCCACTTTTGATCCACATCCTTCTCTGCTTTATAATGGAATGTTTTAGTTAAAATTCCTCACTGAAAGCACAACACCTGA GAAATCAAATACTATGATGGCATGATCTATTAAGTTTTAAAATCTTTAGTTTCAATTACTCAATGCTCAGATGAAGTGTG TAAATTGTGGTCTAAAACCACATTTAAAGCTGCAATTCTAATCATTCCTAAGAATGAAATTACTACCGATTTTCATTCAT TTCATTCTCATTAAATAGGTTGGGAATAAATTATCATTAGTAATTATATTCCTTGGAATGTAGCAATAACATTTTTCTAA GTGGAAGGAATCTGAGTCTCTTAAGCATGTGGTTCTGCCTTGATCCATGTTTATGAAAAAGAAAAAAACATTGTTGGAAA AGTCTTAGGAGATTAGTCACTCACTCACCTATAGAGTAGGAGAATACTCTGGTAAATCAAAAAGATATATTCCTTAGAAT ATTATTTCAGAGAACGTATTGTCAAATCTTAAAACAAATCCCCTTATGCTTTTAGAATGTTTGCAACTGCCCATTAGCTC CATTTGTACACATCTAAATCTCGAAGAGATTGGTTTCATTATTGCCGATTGTGAGATACGTTGCGGAAAAAAATTCTCCA ATTGATAATATTCCATTTATGCCATATGAGATAAATGTGGTATGTATAAATAAATGAACTATGTCATCAATTATCTATTT CCTTTTCATGTTAAGGTATTTGCACCATGAGTCAACTCCTCACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTC TAGACACTGAATTTCAAGCAATGGTTGCTGATTTTGGCTTTGCAAAGCTAGTACCAGATGGTGTGACCCATCTCACCACA AAGGTTAAAGGCACATTAGGATATTTGGCACCAGAATACGCCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTTTACAG CTTTGGGATTTTGCTGTTGGAGATTGTCAGTGCCAAGAGACCAATTGAGAAATTCCCGGGGGGAGTGAAAAGGGATGTTG TTCAATGGGCCACACCATTATTGAAGAAGGGTTTGTTTTATAATATTGCAGATCCAAAGTTGAAGGGTGAATTTGATATG GAGCAATTGAAAATAGTGACTGCAATAGCTATGAAATGCACTGATAGCAGTGCGGAGAAGAGGCCTACCATGACAGAAGT AGTGGATATGCTGAAGGATGGTATAGGGAAGAGAAGTGATTATTCCAATTTTAAGAAGAATATTATTGACCAAAAAAGTA AGAAGAATATTGAAGATGAAGAAAATGAAAAAAACTATTTGTATTAGGAGACAGAAATGATGTAATCAAAGTTGAAAAAT ACCACCTGATATGTATGAAGTCTTTTTTTTTAACTTTAACCAATTCTATAAAATCAAGCAGCATAGACGCCAAAATGTTG GAACGAACAAAAGAGTCTAGACCAGGGCAAGAAAGTCTGCGGCACTATTGCCGGATCTACGAACAAAAGAAATATCCATG CGAGTAAAAGATAAAGCTAAGGAACGACAATCCTCAAGAACCAAATCAAGATAAGAGTAGTCTCTACTGCGACGTCACCA CCACTGAAACAGCTGCAAAGAATCTGTCTCAAAACAAACGGAGAAGAACCCCAAATCAAGAGCAAGGCGCATCGCCCACC GCAAGCAAAGGGCCTCCGCTAAACCCGTTGATTGCATCATCACCGGAGTTAGAGTGGCCGCCGCAAGGAGCTCTCCTGCC TCATCCCTTGCTACCATGACAAACGATGCCAAGGATCGTCGGACCAACGCGTCCACATTGACTTTGATCCACCCAACCGG AGGCCTCGTCCATGTCACAGCATCAGACCCTGGAACACGCTGAAACGCTACTAGTCTAGGCAAGGCTTCAAGAGCTTCCA GCCGAGAGAAGATGTGGTGAACAGACAGCTCTCTCCCTTCAAAAACTCGAGCATTCTTGGCCTCCCATAACACATACACC AGTGTGAGAACCCTCGCGATTACCTCCTACCCACACCCTCCACGATTCGTGACACCTTTTTTTTTTTACTGAACGCTCAA TTTGCTCCCTGGAAATTTTTGTTGCGGACAAGTTAATCATTTTAAGGAAATTTGAAGGTTTCTAAATTCATAAAACGCAT GTAAGGGAGTAATTTGACAGTGAAAATTAATTTAACCGACATTTTAAACATTTAAAATTTTATAAATATATATGTTCCGG TGACTAATTTACCCATGGAAAATTCTTTCAAGTACCAAATTAACATTATATTATTTTTTAAGGGGATTGTTTATGAAATA TAGTCTATAC
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0152900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTACTTGAAACGTTATTGTTGTTTCCCCTCAGACAATGAGCAAAGCAAACTTAACAATAGGGACTATCCATGGGAAAT GTACACCTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCACGATAATAAGATTGGAGAGGGTGGATTTGGAAGTG TTTATTTTGGTCGAACAATTGAAGGCATTGAGATTGCGGTGAAGCGGTTGAAGATGATGACGGCGAAGGCGGAGATGGAG TTTGCAGTAGAAGTGGAAGTACTTGGAAGAGTGAGGCATAAAAATTTGTTGGGATTGAGGGGTTACTATGCAGGGGAAAA TGAAAGGTTAATTGTGTATGATTACATGCCAAATCATAGTTTGCTCACTCATTTGCATGGTCCACTCTCTAAGGAATGTC ATCTAGATTGGAGTAGAAGGATGAGTATTGCAATTGGAGCTGCTGAAGCTGTGGCGTATTTGCACCATGAGTCAACTCCT CACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTCTAGACACTGAATTTCAAGCAATGGTTGCTGATTTTGGCTT TGCAAAGCTAGTACCAGATGGTGTGACCCATCTCACCACAAAGGTTAAAGGCACATTAGGATATTTGGCACCAGAATACG CCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTTTACAGCTTTGGGATTTTGCTGTTGGAGATTGTCAGTGCCAAGAGA CCAATTGAGAAATTCCCGGGGGGAGTGAAAAGGGATGTTGTTCAATGGGCCACACCATTATTGAAGAAGGGTTTGTTTTA TAATATTGCAGATCCAAAGTTGAAGGGTGAATTTGATATGGAGCAATTGAAAATAGTGACTGCAATAGCTATGAAATGCA CTGATAGCAGTGCGGAGAAGAGGCCTACCATGACAGAAGTAGTGGATATGCTGAAGGATGGTATAGGGAAGAGAAGTGAT TATTCCAATTTTAAGAAGAATATTATTGACCAAAAAAGTAAGAAGAATATTGAAGATGAAGAAAATGAAAAAAACTATTT GTATTAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0152900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MYLKRYCCFPSDNEQSKLNNRDYPWEMYTLKELLRATNNFHHDNKIGEGGFGSVYFGRTIEGIEIAVKRLKMMTAKAEME FAVEVEVLGRVRHKNLLGLRGYYAGENERLIVYDYMPNHSLLTHLHGPLSKECHLDWSRRMSIAIGAAEAVAYLHHESTP HIIHRDIKASNVLLDTEFQAMVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKR PIEKFPGGVKRDVVQWATPLLKKGLFYNIADPKLKGEFDMEQLKIVTAIAMKCTDSSAEKRPTMTEVVDMLKDGIGKRSD YSNFKKNIIDQKSKKNIEDEENEKNYLY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
8 115 108 9.6E-29 –
PANTHER
PTHR27001:SF178
19 316 298 1.7E-124 –
PANTHER
PTHR27001
19 316 298 1.7E-124 –
SUPERFAMILY
SSF56112
21 312 292 1.75E-77
IPR011009
SMART
SM00220
40 311 272 9.3E-28
IPR000719
Pfam
PF00069
40 309 270 1.7E-42
IPR000719
ProSiteProfiles
PS50011
40 315 276 35.156
IPR000719
ProSitePatterns
PS00107
46 68 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
116 340 225 8.6E-60 –
ProSitePatterns
PS00108
162 174 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0152900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…