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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0159300 |
| Transcript ID | LotjaGi2g1v0159300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1-aminocyclopropane-1-carboxylate synthase; TAIR: AT5G51690.1 1-amino-cyclopropane-1-carboxylate synthase 12; Swiss-Prot: sp|Q8GYY0|1A112_ARATH Probable aminotransferase ACS12; TrEMBL-Plants: tr|A0A151T460|A0A151T460_CAJCA Putative aminotransferase ACS12; Found in the gene: LotjaGi2g1v0159300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:56033611..56039393) extracted from Lotus japonicus Gifu genome v1.2.
CAATTACGAGGATGCTAAAGCTAAGGAGATAGTGGTAATCATAAGAACAAAACAAAAAGAGAAACAAAACAAAACAACAC TTCACTTGTTTCTTCATTTTCTCACCATTCTTTTCTTCAACCACACAAACCAAACCCAACCCAACCCAACCCAACCCAAC ATCACACTCTTCTTCCTCCTCCCTCCATCTCCGGCGGGTCAATGACCCAAACCCGAAAACCCTCCGACCCAAAACACCGT ACCCGAGAACCCAAAACCCCTTCTTCTTCTTCTTCTTCTTCGTTCTCCACGAGCGGCATGAAACTCATCGTGCCCCTTCA AGGCGTGGTTCAAGGTCGTGGAGGCCTTTTTCTCGGTACTCTCATCCCTTGTGCACTCTTCTACTTCCTCCAGCTCTACC TCAAACGACGCCGTTCCGGCTTCAACAACCCTCCTTCTCCGTCTTCCACCTCTTCCCCTACCCTCCCTCGCACTTCCTCC CGCTCCAACTTGTCGACCCGTGGGTCAATTTCCCGGGTCCGGGTCTCCAAGCTCGCCACCCTCGTCGCCAAGCCTGATGA CTCGCTGTATTATCTTGGCTTAGAAAAGGTCTCTCAGGATCCCTATGATGCGTCGGAGAATCCCAATGGGATTATTCAGC TTGGCTTGTCTGACAACAAGGTTGGTTCTTTTCGTTTTCTACGAGGTTTTTTGTCCTTTTTCGTATCTGGGTATGTCACT GATTTTGTTTTTTTGTTTGTTTTCTTTCTTTGTAGCTGTGTTTGGATTTGATTGGGAAATGGGTGTCCCGGAATTTGGAG GGGTCGTTGATGGGTAGTAGTGATGATGTTACTTTGAGCATTAATGGGATTGCACCTTATCAGCCACATGATGGATTGGG GGAATTGAAAATGGTAAGAGAGATTTACTGTGTTTGTGAATTTGGTTGGTTTTTCTTCTGCATTGTAGTGTAATTGGGGG AATGATGGAGTGCAGGAGTGGAGTGTTTGTATCCACTTATTGTGAGGAACATTTGCCTGTTTGCTGAAAATCATACGCAT TTCTTATTCTGTATTGTTATTTAGCTTCAGCCTTCAAGTATTGCTGTTATGGTTTTTGATAGCTTTGTTGATATTTGTTC ATCACCCACCATCATCTTTATGTTACAATGGAAGTGCAAGGACCTAGGTAGGAGAAGGGGATAGGTGGTACTGTATCGTG ATTCATGACTGGTTATCTCAAAAGTTTAAAATCAAGGCACATTAAATGGTTTTATACGAATTCTAACACACCTCTCAAAA AAGGCCTTTGAGCTTGAAGCATGGATAATATACAAGCCCACTGACCTTGTTCTTAATTTTAACTTTTTTTTTTAGAAAAA ATTAGATAAGAAAATTGGGAGCTCTGGTGCCTACTGCCTTATCATGAACCAATTGTCCCACAAATATAAGCTGTTTGGTA AATGAACATGAATGGTTTTATGATATTTCTAACATAGTGGAGGATCAAACCTCAAATGATATCATCACAACCCTCATCTT GGAGGTGGTCCACAAGCTTGCTGGCTGATAAGTTTTTAATATAATTTTTAAATGTTCTTCTTGCCATGTGATGAGGTCAC TAGTTGAAGTCCTGTAAACAGCCTCTTGTGTTAAAACAAGGTAAGGCTGCGTACAATAGATCAAGTGGCCGGACCATTCC CTCGACACTGCACATTGCGGGAGCTTTGTGCACCGGGCTGCCCCTTTATAACTATTCTGAATGTGAGCTATCTTGCTTCT CATTGTGTTAAGTGAATATTGAAGAACTTGAGATTTTAGAGCCATTGCATTCAATATTCTCCCTTTTAATACAGTATAAT TCCCAGGTTTTGAGAATAAATATATATTCTGAATGCAGTAAAGGGGCATTTCAGTTTTTCTCTGAATGCAATATCTGTTC TGAATTTTAGCGTATCATGTCCTGTGTTTGTGATTTAGGCCTTCTTTGCTAGTGGAATTGTCCATTAGTTGCATTGGGTT CTTCTATGATCTTTTTAGATTTATACTGTCCTGTATTCAGATTGAGTGCATTTAAGGGTCATGCTGTTGAATTGAGTAAT TTACCTGCTAAACTTACGTTGTTTGCTTTGAATTTTGCAGGCCTTGTCGGATTTCATGCAGCAGGTGATGGGAGAATCAG TGAAATTCGACCCATCAAATATGATACTAACATCTGGAGCAACTCCTGCAATTGAAATTCTTTCCTTCTGCTTAGCAGAC CATGGAAATGCATTCCTTGTCCCTACACCTTACTATCCAGGGTAATAATTGGCAATTTCTTGAGCTACTTATTCCTATTT CTTATACTAATTGACAAAGCTAATTAAAAGAAACTATGCAGCTTTGTCAGAGACGTGAGATGGCGCCCAGGCGTTGACTT AATACCTGTTCACTGTCGTAGTACTGACAACTTCAATCTAAATATCACTGCTCTTGAACAAGCATATAGTCAAGCAAGAA AACGAGGAGTCAAAGTTCGTGGGATCCTCATCTCCAACCCTTCGAATCCTGTTGGAAATATTCTGACACCAGACGTACTT TTCAGTCTTCTAGACTTCGCTGAAGAGAAAAACATTCATATCATTGCCGATGAAGTATTTGCAGGCTCGACATATGGAAG TGACAAGTTTGTGAGCATAGCTGAAATTCTCGATTCCGAATATGTAGACAAGAGCCGGGTTCATATAGTATATGGCCTGT CGAAAGACCTCTCACTTGCTGGCTTTAGAGTTGGGGTTATATATTCATTCAACCACACTGTTTTAGCTGCTGCCAAGAAG TTAAGTAGATTTTCCTCTATATCTGCGCCAACCCAAAGGTTAGTTGCTTCAATGCTTTCAGATAAAAGATTTATTCAGGA GTACCTTGAAACCAACCGGTACAGAATACAACAGGTACATGATAAATTTGTGGATTGTTTAAGTAAACTAGGAATCAAGT GTGCCAAGAGCAGTGCTGGCATGTTTTGTTGGGCTGATATGAGCGGATTAATCCGACCGTATAGTGAGAAAGGAGAACTT GAGTTATGGGAGAAGTTTATGAGTGTTAGTAAGATCAATATAACTCCTGGATCAGCCTGCCATTGCATAGAACCAGGATG GTTTCGTATTTGTTTTACAAGTATATCTTTTGAGGACATTCCTCTAGTCATTGAACGGATTAGAAGAGTTGTTGAAAGTT GTAAATCTTCCAGTTGAAGTTTCATTTTTTTCTCCTGACACTTCAGGCTATTGCCTGATATTGCTGTTTAGAAATTTTGG GAAGAAATGTATACATAATTTATTATGAAGTTCAGCTGTCCTGTGGAGTCCAGGATTCATAGGAAATAATCTCTTGCAAT GCAAAATCTCAACAAAATAGTAGCATGTTTGGTTCCACGGTGAAATACTCTAGAATCACTTCTGCTTAGAAGCTACAAGT CTTATTTTCTAAGTAAACGTGTCTTGGATTCGAAAGAGAAACATCTTAACTATTTTGTAAATATAGACTAATCATAGAGA ATGTGTGTGAGAGTGTATTTGAAAGAGTGTCTTGCTTGCACATGACTTCCTTACCATGACACCACAAGTAGAGGAAGACA AGCTTTTGAATTTGATAATGATAGTCTTCTATAAGCTCTAGTCTTTTCTTATTTTGGTTTTGGGTTATGCTCACTTTAAA TTTTATTTCACGAAAACATACATCAACTTCATGTCCCCAAATCTAGTGGAATTGAATTTATGATGTGAGGACCCATATTT TGATGTAAGCCAGAATTAATAATTAGGTGGGCACAGGTTGCATTTTAGGAAAGATGCACCAACCAATTTTTTAAAAATCA GTTAGGTCATTAAACCAGTGAAGGTCATATACTGTTTAATGGTTTAACCGTTTCGAACTGCGGTTAAACCGATACCATAA TTAAATAAAAGTTTAAACATAATTTTGGTCCTTACACTAAACATATTTTTCCTCACACAAGTTTTTTATTTTGGTCCCTT TATGATTCATGTCCCTAATTTTTAAAGTAGGCAATTTTGGTTCCTGAAGATAACAGACCTATGTTAAAAGGGGACATGTC TAATGGAAGATCACGTCAGCATTGCCATGTATATACACTTAATCTTACATGGCAAGTGATGGCACCCAGCGGCGGAGGGA GTGGTGGAGGGAGGGGGACACACCCATACCTTGGCCCTCCAATTCTTGGTTCTTTAATCTCAAATTCCCGCCTCCGCCAC TAATGACACCTATCAACTCCAGCATCCCCTCTCCCTCATATTGTTTGCTGAAACGTAAAACCTTATAGCAAACAAAGAAT AATGCCTATCATTTGATAAAACTTGCACTAGACTACTGTGTCGGAACTTGGCTCAAGTGTTGTGCCAGCTTGCAGTTTCT GAAAAGGATGATCTTGTTCATTTGTCATTCAAGGCAATTGGATTAGTTTATTCTGTAAGACCCTCAGGATCTTTGTTGCA GCTTCTTTTGATATCATTATGGACAATTTGCTAAAGGAACAGAACAAGCTAGTATGACGACATATCAAGGTTTTAAATAT GGAAGTTTTCAGATTGTAGTTCTGAATAGTTGCAATAACATCTATACTAACTTATGTTTCATTGGCTAAATTTTTTATGT TAGATTACTTTCTTCTGTGAACAATCATCAACACACTCATTTGTTGACAGAGCAAATGAAAGGGGTGATGTTTAATGCAG CAGCACTATTTTGGAAGCCATTTTCCTTCCCTCTTCATAATCTGTTCCTCATTTTATATAGAAGATAAAAATAAGAAAGA ATCCTAAACTTGGTTGGTTCTTCCTATAGATTCAGATCGCGAGTAAGATGACAATTGACCTGGCATCTGACATAAGTGCA GGCGTGTCAGATCAGGGACTAAAACCCAGTTTTTCTTATTTTTGAGGGACCGGAACTCAAATTGGCTCCACAGATCCCAA CCATGCACACAAAAAGGGTATGAAACAAGTTATTTAATAACAACATCAAACATGTGTATTGGTGGGTGAGTGCGTGCATT GAAATTAAAGTATGGAGCTAATTCTATTGGCAGCATCATCAACATCAGCATGAACGAAGACAACTCGAAATGCAGGATCA CCTTCTTCGGTAAGGATGAGACGCCTTCCATTGTTATCATCATCTTGCCTTCCAATATCAAAACAAAGACCAAGTGGGGA AGTAAAAATGGGGCAGAACACAAGCTTGTATGCAAAACAATATTTCTCAATTTTAAACGAACCATTCAAGACACTACGGT TCTCATGATGAACACCACCAATATCAACCCATTCTCTAGGGAAATCATCACCTTCAAAATGCCACTTGGAGGATGTGGCA CACTCTGGCTTCTCCGCAAATTCAATATCAAGTGGAGTGCCGGTAAGGATGGCACCGGTGCTTATATCCACTCCCGCAAT GCTAAATTTCACTGGAAGACCTGTCACAACCTCAAAATAGTCTTGTTGTATAGTAACGGGGCACTCTGAGTTTGCGGTAG TTCTGCCTAGACTGATTCCTCCACCATCTGCGCTACGAAAAGCTGGCAAGATGAGGTATCTGCTACCAGGGAGAATGGGG TTTCCATTTGTGTCCTTCACTTGTTTAGCATGTTGTGAGATTAAGGCTGATGGAAGGTCAGTGATGATGAAGGCATAGAC AAGGGAAGTGAGGATGAATAAAATTGTAGTCTTCATTGTTCTCTATGTTTTTGCATTTGCGCCTTGCTCAAATCTCCTCT ATTTATAATAGATAGTGTTCTTC
CDS sequence (LotjaGi2g1v0159300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCCAAACCCGAAAACCCTCCGACCCAAAACACCGTACCCGAGAACCCAAAACCCCTTCTTCTTCTTCTTCTTCTTC GTTCTCCACGAGCGGCATGAAACTCATCGTGCCCCTTCAAGGCGTGGTTCAAGGTCGTGGAGGCCTTTTTCTCGGTACTC TCATCCCTTGTGCACTCTTCTACTTCCTCCAGCTCTACCTCAAACGACGCCGTTCCGGCTTCAACAACCCTCCTTCTCCG TCTTCCACCTCTTCCCCTACCCTCCCTCGCACTTCCTCCCGCTCCAACTTGTCGACCCGTGGGTCAATTTCCCGGGTCCG GGTCTCCAAGCTCGCCACCCTCGTCGCCAAGCCTGATGACTCGCTGTATTATCTTGGCTTAGAAAAGGTCTCTCAGGATC CCTATGATGCGTCGGAGAATCCCAATGGGATTATTCAGCTTGGCTTGTCTGACAACAAGCTGTGTTTGGATTTGATTGGG AAATGGGTGTCCCGGAATTTGGAGGGGTCGTTGATGGGTAGTAGTGATGATGTTACTTTGAGCATTAATGGGATTGCACC TTATCAGCCACATGATGGATTGGGGGAATTGAAAATGGCCTTGTCGGATTTCATGCAGCAGGTGATGGGAGAATCAGTGA AATTCGACCCATCAAATATGATACTAACATCTGGAGCAACTCCTGCAATTGAAATTCTTTCCTTCTGCTTAGCAGACCAT GGAAATGCATTCCTTGTCCCTACACCTTACTATCCAGGCTTTGTCAGAGACGTGAGATGGCGCCCAGGCGTTGACTTAAT ACCTGTTCACTGTCGTAGTACTGACAACTTCAATCTAAATATCACTGCTCTTGAACAAGCATATAGTCAAGCAAGAAAAC GAGGAGTCAAAGTTCGTGGGATCCTCATCTCCAACCCTTCGAATCCTGTTGGAAATATTCTGACACCAGACGTACTTTTC AGTCTTCTAGACTTCGCTGAAGAGAAAAACATTCATATCATTGCCGATGAAGTATTTGCAGGCTCGACATATGGAAGTGA CAAGTTTGTGAGCATAGCTGAAATTCTCGATTCCGAATATGTAGACAAGAGCCGGGTTCATATAGTATATGGCCTGTCGA AAGACCTCTCACTTGCTGGCTTTAGAGTTGGGGTTATATATTCATTCAACCACACTGTTTTAGCTGCTGCCAAGAAGTTA AGTAGATTTTCCTCTATATCTGCGCCAACCCAAAGGTTAGTTGCTTCAATGCTTTCAGATAAAAGATTTATTCAGGAGTA CCTTGAAACCAACCGGTACAGAATACAACAGGTACATGATAAATTTGTGGATTGTTTAAGTAAACTAGGAATCAAGTGTG CCAAGAGCAGTGCTGGCATGTTTTGTTGGGCTGATATGAGCGGATTAATCCGACCGTATAGTGAGAAAGGAGAACTTGAG TTATGGGAGAAGTTTATGAGTGTTAGTAAGATCAATATAACTCCTGGATCAGCCTGCCATTGCATAGAACCAGGATGGTT TCGTATTTGTTTTACAAGTATATCTTTTGAGGACATTCCTCTAGTCATTGAACGGATTAGAAGAGTTGTTGAAAGTTGTA AATCTTCCAGTTGA
Protein sequence (LotjaGi2g1v0159300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTQTRKPSDPKHRTREPKTPSSSSSSSFSTSGMKLIVPLQGVVQGRGGLFLGTLIPCALFYFLQLYLKRRRSGFNNPPSP SSTSSPTLPRTSSRSNLSTRGSISRVRVSKLATLVAKPDDSLYYLGLEKVSQDPYDASENPNGIIQLGLSDNKLCLDLIG KWVSRNLEGSLMGSSDDVTLSINGIAPYQPHDGLGELKMALSDFMQQVMGESVKFDPSNMILTSGATPAIEILSFCLADH GNAFLVPTPYYPGFVRDVRWRPGVDLIPVHCRSTDNFNLNITALEQAYSQARKRGVKVRGILISNPSNPVGNILTPDVLF SLLDFAEEKNIHIIADEVFAGSTYGSDKFVSIAEILDSEYVDKSRVHIVYGLSKDLSLAGFRVGVIYSFNHTVLAAAKKL SRFSSISAPTQRLVASMLSDKRFIQEYLETNRYRIQQVHDKFVDCLSKLGIKCAKSSAGMFCWADMSGLIRPYSEKGELE LWEKFMSVSKINITPGSACHCIEPGWFRICFTSISFEDIPLVIERIRRVVESCKSSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | - | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| MobiDBLite | 1 | 18 | 18 | - | – | |
| PANTHER | 32 | 536 | 505 | 1.2E-264 | – | |
| PANTHER | 32 | 536 | 505 | 1.2E-264 | – | |
| TMHMM | 42 | 64 | 23 | - | – | |
| Phobius | 48 | 67 | 20 | - | – | |
| Phobius | 68 | 537 | 470 | - | – | |
| MobiDBLite | 74 | 101 | 28 | - | – | |
| SUPERFAMILY | 117 | 531 | 415 | 9.14E-95 | ||
| Gene3D | 133 | 525 | 393 | 1.8E-135 | ||
| Pfam | 146 | 526 | 381 | 3.9E-81 | ||
| PRINTS | 147 | 173 | 27 | 5.5E-72 | – | |
| Gene3D | 167 | 420 | 254 | 1.8E-135 | ||
| PRINTS | 182 | 198 | 17 | 5.5E-72 | – | |
| CDD | 188 | 528 | 341 | 3.89218E-62 | – | |
| PRINTS | 219 | 239 | 21 | 5.5E-72 | – | |
| PRINTS | 241 | 262 | 22 | 5.5E-72 | – | |
| PRINTS | 295 | 319 | 25 | 5.5E-72 | – | |
| PRINTS | 331 | 354 | 24 | 5.5E-72 | – | |
| PRINTS | 365 | 389 | 25 | 5.5E-72 | – | |
| ProSitePatterns | 371 | 384 | 14 | - | ||
| PRINTS | 397 | 420 | 24 | 5.5E-72 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi2g1v0159300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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