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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0165000 |
| Transcript ID | LotjaGi2g1v0165000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein; TAIR: AT1G12700.1 RNA processing FACTOR; Swiss-Prot: sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial; TrEMBL-Plants: tr|A0A072UVT5|A0A072UVT5_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi2g1v0165000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:57473287..57484821) extracted from Lotus japonicus Gifu genome v1.2.
CTGAACATTGCTGGATGGAAGAAGACCCTCAGGGAACTTCCATGTTGATCTCAAATGATGTAAATTTAGCAGCTTCTGTT GTTGAATGAAGACAGTACTTAAACTTCAAAAAAATAAAAAACCCTAGTGACTCGTGTGGAGGTGTGTTTGATATGGTGGC AACATATCATGGAATTACAAGTTTTTTGAACACCTTCTCTCCTCTCACAGGCACAGTCATCGTGGCAAAGTAGTGACGGA TAGTCTCTGTTCCAATTATTCAGGATGGCACCATGACGATTCCTCTCAAAACAAAGCCTACTTGAGAACCCAACTCAACT CGCTCTCAGACTCACTCGAAGCACTCCTCCTCTGTGCTGAGTCACAGACACCGAGTCACTCCTCACAATGCGAACAAGGG CGGCTTCCATCTCTTCTTTCCGACCCACCGCCGCCGCCGTCACTTCCACTTCTTCCCCCGCCACCACCGCAACAACCACC ACCAGAACCCACCTCCTTAACTCCATCCGAAGCCTCAAAACCCTCGACGCCGCCGTCGCTTTCTTCCACCAAATGCTCGC CGCGAACCCCTTCCCCTGCGTCAAGGACTTCAACTCCCTCTTCACCTTCGTCGCCAGGACCAAACACTATGCCGCCGCCA TCTCCCTCATCAAGCGCGCGCACTCCTCCGGCGTCGCGCCAGACATCTACACTCTCAACATCGTCATCAACTGCCTCTGC CACCTTCGCCGCACCGCCTTCGGGCTCTCCGTCCTCGGCCTCGTCTTCAAGACCGGGCTCCGGCCAACCACGGCGACGCT CAACACCATTGTTAACGGGCTCTGTCTCGAGAACAATGTAGCCTCAGCTGTCACATTCACTCGCCACATGGAAAATGCAG GGTATCAACCTAACAGTTACACTTTTGGGGCAATAATCAATGGTTTTTGCAAAATTGGGGACACAGAATCTGCTGTGTTG TGTATGAGAAACATGGTTGAGAGACACTGCGAACCGAATGCGGTTGTGTACAATGCAATCATGGATGGTCTTTGCAAAGA TGGGTTGGTGAATGAGGCTTTGAAATTGTTCTCAGAGATGAAGAATAGTAAAGGTATTCAACCTACTATTGTTAGTTACA ATTGCTTGATTCAGGGGCTTTTTAAGTTTGGTAGATGGAAAGAGGGTGCAGGTTTGTTATATGAGATGATGCAGAAGGGT GTGATGCCTGATGTGCAAACGTTTTCTATTTTGGTTGATGGGTTTGGCAAGGAGGGGTTGGTTTCTGGGGCGAGGTGTGT GATGGGTTTCATGGTTCATGTGGGGGTGGAGCCCAATGTTGTTACTTATAACTCGTTGATTGGCGGGTATTGTTTGCGAC ATCAAATGGAAGAGGCCATGAAGGTGTTTGATTTAATGGTTAGGAGGGGCTGTTTGCCGAGTGTTGTGACTTATAATTCG TTGATTCATGGGTGGTGTAAGGTTAAGGATGTTGATAGGGCTATATGTCTGTTGGGTGAGATGGTTAATGAAGGGTTGAA ACCGGATGTGGTGACTTGGACTGCTCTTGTAGGTGGGTTTTGTCAAGTGGGAAAGCCACTGGCTGCTAAAGAATTGTTCT TTACAATGAAGGAACATGGACAGGTTCCTAATCTTCAGACTTGTACTGTTATATTGGATGGTCTGTTCAAATGTCGTTTT CATTCTGAGGCGATGTCGTTGTTTAGGGCAATGGAGAAAAGTGATATCGATCTTGATATTGTGGTTTACAATGTTATGCT TGATGGAATGTGCAAAGCTGGAAGACTGCGTGATGCGAAGAAACTTCTTGCTCGTCTGCTGGCTAAAGGGTTGAAATTTG ATACCTATACTTTTAACATAATGATCAGAGGTCTGTGTTGGGAAGGACTACTGGATGAGGCTGAAGAGTTGCTTATGAGA ATGGAAGAGAATGGATGTCCACCTAATAGGTGTTCTTATAATGTCTTTGTCCATGGATTGCTGCGAAAACTTGATATTTC AAGGTCAGAAAAGTACCTTCAAATAATGAAATGTAAAGGTTTTCCAGTAGATGCTAACACCACAGAGTTGCTTATATGCA TCTACTCTGCTAATAAAGGAGATAATGCATTTCAAGAGTTGCAGCAGAACTGAAGTTTGTATGTGTTTAATCTCTTTATG CATTATTTGATGAGGATTTATGTCATGTTTTAAGATATCAGACTGTCAGCTAGGCCACACTTAATGGTCAGAGCACATCC TTAAGACCATTGGGGGTTCAACTGCCCAAAATCATTCAGAACTTGATGGTAAAAAGTACAACGGAGACACTCTATGAAAT TCCGATCGGATTGTGACACTGATGGTCTTCTGAGTGCTAGATCATCCAAGAGACTTGAGAAGCCTGCATATTTTGACCAG ACATTAACCCTGTTTGATGCCAACAAGATGGGAGATGGTGGAGCTGTGTTTTTCTAGCTTGCAATTGAAATGTTTTGATT GAGACATAATCGTACGTTTGGTGTATGGGTCACATGGAGGTATGTCCAAATCACCTAAAATTCTCATTCCTTGCAAACAT TATATTCAATGTTTTTAGTTTTACCTGCTGAAAACTTCCCTCATTTAAACCTGCAACATTGAATGATACGTTTAAAATGT TCATATGGTATATATTTATCTGTAAAATTTCTAATTCAAGATTCTACTTTAATCTGAATGATACATACAAAGAAAAAGAA AAAAGAAGTTGAAGAGGGGACTTCAGGAGACATTCGGCTCCAAACCATATCTATGAAGTATTTATCAGCATTAACAGTAT CCTGAAATTCAGCATTGATTTCAAAAATATGGCAGTGTGTTTACCATTGTTTTCTAACACACACACACACACACATATAT AAATGGATTTAACTGAGGAAGGTATTGTTAAAATACTGAGAACAATGTTGTGGAATTGCTACTTCAATGACATTCTTCTT TATTTTCAGGTTGCCACAGTAGAGCTAGAATATCCTTTCGATGGTTGGCAGTGGGCTAAACCAGTGTGTCCTAAGCTCTG TCATGTGGATTTGCTAAGCAAGATTGTCCTTGATCAGATTATGAACATTGATTTGGAATTGTTGCTTAATGGTAATCGCA TGACCTATAATAGTATCAGAAGTTCACATCATTGTCACTTGAAATCCTTACGATGCCCCATTGTCACTTGCTGATATGTG GGAAAGTCTCTATGATTTGAACTTTGTGGATGACATGTGGCCATTTGGAGGTGTTCTTGTGATGTCTTTGTTCAGGGATT TCTGTGAGAACATGATATTTCAAGGTCAGAAAAGTACCTTCAAGGCTTCAAATATTGAAATGTAAAGGTTTTCCAGTAGA TGCTAACACCAGAGTTGCTTATATGCATTATAATCTGCTAATAAAGGAGATAATGCATTTCAAGAGTTGCTCCAGAACTG AAATTTGTTTGTATTTAATCTCTCTATGCATTATTTGATGAGGACTCATATCATGTTTGAAGAGATCAGAATGTCAATTA GGCCTCTTATTGGTCAGAGCACATCCTTAAGACTATTGTGGGTTCAGCTACCTAGAATCATACAGAACTGGATGGTAGAA AGTACAAGGGAGACTCAGAATGATATTAAGCTACAGAATTACAATCTGATTGCGACACTGATGGTCTTCTTAGTGGTAGA TCTTCCAAGAGTTCTGAGCAGCCTGCATATTTTGACCAGACTTTAACCCATTTCGATGCCAACAAGATGGAGGAAGATGG TGGAGGAAGATGGAGGCTGTGTTTTTCTAGCTTGCAATTGAAATGTTCTGATTGAGACATAATTGTATGTTCGGTGTATG GGGCACATGAAGGTATGTTCAAATCACCTATAATTCTCACTTCTTGCAAATAATTATATTTAAATGTTTGTAGTTTAATC TGCTGAAAACTTCCCTCATTAAAACCTGCAACATTAAAAATACGTTTAAAATGTTCCTAAAAATACGTCTAATTCAAGAT TCCGCTTTAATCTGAATGATACATAAAGAAAGGAAAAAATAAAAAAGATGAAGAGGTGACTTCAGAGGCATTCAGCTCCA AACCATATCTACAAAGTATATATCAGCATTAACAGTGTCCTGAAAGCATTGATTTTAAATATATGTACCATTGTTTACTA ACTATATAGATATATATATATATGGATTTAAGAGAGGACGATCATTGATAAAATACAAGATTAAAATAAATACGCGTGGT ATTGATGAGTTGGACTTTAGTTATCTACCGGTATCGGAATCGCAAGTTTGGGCGGCGATTCCGCTTCAGATTAGTCCGCT TCTTCTTTGAGGAGCAAGCCTATTCTGCAGTCAACGTTCTAGATGGCCTTAGGGTGGGTGGTGCTGCGCTTTCGGTGGCA CCGGTGAAGTTTCCAAGGGACAAGTCGAGAAGCTCTGTTTCTTAGGGATGTAGCGGCAAGGATTCACCGGCGTCGATGGC TGACCCTTACAAGGCTAGCGTTCGTGGGCAGAAATCTTGGAGGGAGGCTCTTGTAGGTAAGTGTTGTTTGTCTGTTACCT CTCCTATTGAAGAGCTGAGGGGGCTGGATCGTGGTTGCTTTTTGGGGGAAAGAATCCCTATTGAATTTCTTTTCCCTGAA ATTGGTTATGGGTCTCTTGGTTCGGATGAGGTGTTGCCTTCCTCTCCTCTGCAGCTTCTTTCATCTGTAGGGGTTAGCGA GGTTGGAGAGTTTGGAGAGGGAGTTAATCTTGGGGAGGCGGAGGTAGGGGCCAGTCATGGGCAGGAGGTGCTCTTGCCTA GGAGACGCGGGCGCCCTAGGAAACTGGGTCGCAAAGCCCGGTTAGCTGCTGGCATTGTTGGTAGAGACACCAAAGGGAAG GATGTTCGCTGTCGAGGTCGGCCAAGGAAGAATGACAGCAAAGTCAAAGAGGTGAGCATTCATAAGGGCTCACCTTCCTC TAGCCCGCAAGCAGAGGACCCTTCTAAAGGCCGTCAGTTGATGCTCTTGCCACCGGAGTTGTCAGATCCACGAGGCATTT TGACTAGAGCAAGGAGTGCTCTTCTGATGGGGAAACGATTGGGATTAGAGTACTCTTGTTCTGATACCGTTGCCTTGAAC CAGATTGCGGCCCAGATTTCAGCGCGTTGAGCTTTGTAGGGTTGAACTTTCTGGTTGAGGTTGTTGCTCGACCTCTCTGT TTGGTTGTTTTGTCCTTGGGGTTTTGTGGGGGGTTTTCTTTTTAGGTTTGTTTGTTCTAGTGGGCTTTTTGTTGTATAGG GGAGGGTATGCTTTTGGTCGGTGTTGTATAGGGCGTTCGTGATTTTTTGTTAGAGCTGATACTCTGCTCCCTCTGCTGTT TTTGAAGATGGCGGGTACCTTCTCCTCTTCATGAGGTGGCTGCTCTCTTGTTTTCCTCTCTTTTATCATATATTTTTTGC TTTCGATAAAAAAAAAGGATTAATGATCAGGACTAAAATGGTATCATTTATAAAATATAATATAATTAAAAACCATAAGA ATTTTACTGGAAAACCAATCTAGATGCTTAATTCCTTCACCATCAATGTGATTGTTGCTGGTTATTCACACCGTGATTGG AACTTGTGTCTAAATCATGTTATTCTCTACTGGATTCTTTGATAATTTCTATACATGTGGTTGTTCATTATTTTGTTTTA TTGTTTTATAGGAATCAAGATTAGAACTGATCAAGGAGATTCCACCATGATTAGCTGTGATAATAGACTTGAAAATGTGC CTAAAGTTGATGCAAAGAGTCACTACACAAGGTATGTGAAGTACAAAGGTTTTAGTTTTCTTATGGTTCATGTTACTAAA TCAAGAACATATTGTTTAGTGATTGGTCAAGAGATCCTTTGGTCAAATGAATGTTTTTCGTGCAAAAAAACATGCAGAAA GGGAAAATAAAAGCTTTGTAGCACATGATGAAACAAGGGTAGGATGCAAGGCATTGTTGTATATAAATTTTTTTTTGAAG AAAAGTGGATTGTTTCTAGATTTGTAAGACTTCTCCAAGAAGTTCACAATTTCATCGAGTACATAGAAAGAAAATTAACA TGCAAAGACAACTTATTGATATGTTCGATGATTCTGGTTTGCGTTGCTGAAAATGGTGGTATCGATAATGTTGGATTTAG TCAACAAGATGTTATTGATTGACGCTATCATATTTTAAGAACGGACAATAGAAGAATCCCGCATTTTTAATGCATTTCAA ATGGATGTATAAGGGAAATTGCCAAATTGTTTGTGTTGATTCAAGGTCTAGAATGACTTACAAATATTTTGGTGATGTGG TGACTTTTGATCCCGCATACTTGGCCAATAGGCACAAAATGCCTTTTGTTCCTTTCACAGTAGTTAATCATCATTAACAA TCCATTCTTTTTGGTTGTGCTCTCTATTATGGGATGAAATTAAAGAGTTTTGTTTGGTTGTTAAGTACTGGTTTAGAAGC AACATTTGGAGTTTGTCCTATAATTATTATCACATACAAGGATGTTGTTATCACTAATGCAGTTGCATTGGTGTTTCTAG AGGTTAATCATTATTTTATGTTGCACATAGAGAAGAAAGTTTCAAAGTACTTGAGCTACTTTTATCATGAACATATTGAT TTTAAAAATCAATTTTACAAGTGCATTTATCAATTTATCACTGTTAAAGAGTTTGAATCTGATTGGGAAGCAATAATACT TAAATATGGGTTGCAAGATATAAGTGGTTGGAGAAGATATATTTCATTCGAGCAAAATGGGTTTCTGCTTTTGTTCGTGA CAATTAATGTGTTGAAATGACATCACTCAAAAAAGTGAAAGTAAAAATAAGTTCTTTAAGGATTTTTTGAATTCGAGTAC TCTATTGAACAAGTTTGTGACACAATGTGATAAGGCTCTTGATGCACAATATGATAAGGCTCTTATCATTGTGTCACAAA CTTGCTCGACGGAATACTCGAATTCAAAAAATCTTTGAAGAACTAATTCTTATTTTCACTTCTTTGAGTGGTGGACATTG CGGCAGACGTACGGATCCATTTTTCTCAAATGGAATATATCTTCTCCAGCCACTTATTATCTTGCAACCCATATTTTTCT ATCATTAAATCAGATTCAAACTCTTCAATATGCTCATGATCAATGTAGCTCAAATAAATTGGAACTTTCTTCTCAATGTG CCACATACAATAATGATGATTAACCTCTGGAAACACCCTTACGACTGCATCAGTGATAGCAGCATCTTGGTTTTTAGGAC AAACTTCAAACATCACTTCTAACCAAGTACTTAACAACCAAACAAAACTCTCTTCAATTACATCCCATAATAGAGCACAA CCAAAAAGAGAGGATTGTTAATGATGATTAACACCTGTGAAAGGAACAAAAGACATTTTGTACATATTGGTCAAGTATGT TGGATCAAAAGTCACTGCATCACCAAAATATTTGTAAGCAATTCTAGACCTTGTATCAACCAAAAACAATTTGCCAATTT CCCTTCCACATCCCCTTGAAATGCATAAAAAACTCAGGATTCTTCAATTGACCGTTCTTTTTTATTAAAATATGATAATA TGAGCATCTACTTTTTCTAATTGTTTTTCCCTCTTGTGGCTTAAATAATCAATAACATCTTGTTGACTAAATCCAACATT ATCAATATCTCCACTTTCAACACACAAGACATGTTATTTTGCTAGGACACGAACTGGAATCACCGAGCAAATCAATAAGT TATCTTTGCATGTTAGTTTTCTTTCTATGCACTCGGTGAAACTGTGAACTTCTTGGAGAATTAAGTTCATGATTATGATC TTACAAATCTAGAAGCAATCCATTTTTCTTCAAAAAAAAAGTCCATTTACAACATTGTCTTGCATCCTAACCTTGTTTCA TCATGTGTTACAATGCATTTATGTTCCCTTTCTACGAGTATTTTTTGCGCTAAAGCATTCTTTTGAATAAAGGATCTCTT AACCAATCATCATACTATTTGTTCTTGATTTAGTAACATGACTCATACGAAAACTAAAACCTTTGTTCTTTGCATACCTT TGTTTAGTGACTCTTTGCATCTTCAATTGATTCAAACTTCATTCCTTTATAGGGCTATAATGGTAGTTCAGTATTGAAAT GATTCACTTTAGGAACACTTTCAAGCCTATTATCGCAGTTAATCATAGTGGAATATCCTTGATCATATGTAATCTTGATT CCTATAAAAAAAAAATAATGAGCAACCACGCGTATAGAAATTATCAAAGAATCTAGTTGAGAATGACATGATTTAGATAT AGGTCTCAATCACTATGTGAATAACCAACAAAAAATAACACTTTGATGGTGAACGAATTAAGCATATGGGTTCATGATGA GAGAATCATCAACTGAAGGAAGCCGAAGAAAAATAACCTGTTTTCTGAGAAAGATTCTCTAAGATTAGATAAAACCACCA AAATTGCAAGTTCCAATGCTTGGGCGACAAAAAAAAAACAAGGAATTAAGTGGTTACAATGAACACCTGTATTAGAGATG AGGAATCATTTGCTAAAGAAATATCAATGAGATTGAGGCATTGATCGTCACCCTTTCTCAAAGAATCATTTGTTTTGGAG ATCTCTAGCTGTTTATAACTGTTGGTTGGCTTCATGAAAAAATACAGAAAAATCAATCCTAGTTCTCCCTCTCAAACTCC ATGTAGATGTAGTTAAAAACCTTTGTTCTTCACAAGGTTAGTGATGACAATGAAATGCACAGATGGAGCACAAGCGTATG TGAAAGGGTTGGAGAGTGTAGGTTTTGGGTGAGATACATGCTCTATTTAATTAAACCAAACTATTTTAGAAAACTTGTCT GACCGGTTAAAAAGAACTAAGGCTATTGGAGTATTGTTTTGTATAAACATGTTTACACTGTTGTACCTCCTTTAAACTCT TTATATAGAGATTTTATTATTTAATATTCATATGATCTTTCAGTTTTTTAGATAAAAATGTTTATTTAAAATGGAATAAA AATAAATAATAATATGAGAGTTAGTAGGCCGGCCGTTTATAAGTGGTATCCGCAACTAGCAAGCTTGACAGATCCATTTG TCCATCCATGGTAATTAATTGAAGCATAACTTGAAAAATAAAATTAACACTTAAACTAAAATAAGACCTATAAAAGAGAA GACTAGATTATAATTTTCTCTCTATAACTTTATTTACCTACAGAAAATACTTAAAATTAAAAAAAAATAATACATAGCTG AATATAACCTATTATTTTTGTGTCTCTTCTACATATTCTTTTCCCTATGTTTCTCATAATAGCATTTAGTCACAGATTAC AGTTCTTTTTGAAGTATGCAGAAGTTGTACCACCATGTACTCTTCCATTCCATTTAAATGGCTAAGAACAGCAAAATTAA AGTGTGATTGATAGTGTTATTTAGTTTACCAAAACCATACTGAATAACTCATCCAACTTAGTTGATTAAGCAGGCTCATA CCTTTGATGACATGCTTGTATGAATACTAGATGAAAATGGATTCAGGAATACACTTGACCTACCATATTCACTTTCTAAG TCACTAACAGCATCAACACCTTCAACCTCAAGCTTTTGTTTTGCTGAAAGGACATGTGGTTCATTTGCAACTTCATCTTC AAATACAACCCATACCTTGCTTATTTTAGTCTCTAATGTCCATGATAAAAAACTTGGGGTTGATGACAAATTAATTTCAA TTTTCTCTTCATTCTTTATGCTATCCTTTGCTTCCACTGCCAATTCTATTTCTGCTGATTTTTTGAAGCGGCCTGAAATG GGTGGTGACTTTGAAGCTGTAAGATGATTTTGCGAACAACCTATTTGATTTAATGCCTCTATGTGATTCATACTGATAAT CTGAACAGAAGGGTATTCCAAGTTCCTGTTTTCAACCACTTTTTTGCAAGTTTCATACAGATCATAAAGCTTCTGGCTCT GCAGTGAAGCTTTCTTGAGTATTTCACACCCTTGGCCTCTAGCTGATTCTGCAAGATCAAAGAACATGTTCACAAGAGCT GCAAGGCCTTCAGAAAATGTCATGTAAACTTGGAAGCTCTCCCTCAAGGTGTTTCTCATTGCAGCTTGAGCCAGGCCATG ATAATCTGAGTGCAAAACATCATGTGGGGAGCATTCCAACACCCTATCAATCAGAACTTGGCACTTTGGCAATGTTCTAA ATGCCAAGTCGAAGGATTTCTCGTCGTAGCGCCTAAATTCTAACCCTTTGGACATGAGAGGTTCAAGTTTCCCAGCTTGA TTGATTAGCCAACTCATCCTCTCTTCAAGATAAGCTGCATATTTTTGTAGGAAATTACCAAAGGGTTCTGAATTGTTCTT TGTGATTGTGACACACCTTATGCTGATTTGAAGATGGCCAGAGACATGTGCTCTGCATAGCTCTTGCTCAAAGGACCTGT TTCCTCCTCGAAGAAGGCGGTGAATCAGGACAAGGGTCTTGAGGGCCACAAGATGATCCTTGGTTTTGCCGAGGCGGCGC GAAAGCCTCTCAGCGAGAAAAGGAATGGACCCTGGAGAGTTGGATACCAGGAAGAGGATTTCATGCATGTATTTGTCATC TATGGTGCTGTTATCATGGCCGGTGGCGCGCAGGACCGCGATCTCTATGCCGGAAAAGCCATCATGTTGGTAATGGTAGA TCATGGCCTTGCCAATAGAAGCATGATCTTTCATTGAGCCAAGTGCTAAACGGAGCTTGCCTTGTATATCCACACCCATT AATTCTTCTTTTGGTGATAAAGAAAAAAGAACTTCGATATGATGCTAGCTAGAACACTAATGAAACAAATTGCTGTTGTG TACTGCAGGGGTATACACATATAAAGGTCAGTGGAGAAACAGAGTGGCCTTAAAAAATTAGCAGCATCAAATCTTTCATA TTTTAAACAGAGAATTGTAATATGCATACAAGAACATTCATCATATAAAGATTGTTATATGTGGTTGCTTAGAAGTCTAT ATACCCAACAACAACACTACAATATCCTATACAGTAAAAGGCAAATATCCAAGTACAAAGTCAACGGGTATAATCAAAAA GCATCCTTTTCCTAGCTATAGTTCCTTTTTTTTGAAGTGACAAATGCGAGATGAATGACAATTTCCAAATCCTTTTTTTA CTCTAACCACATGATCATATTTCAGGGGTGAATACTGAATTGAAGAAATAGATGTAATTAACTTGGTTACAATCATGTAG CAGTTATTTGCAACATTTGATGGAATGGGATGTGGCATTTTTAAGAGTCTTTATCCTTTCTATTCAATTTGTTATGAAAT GCATGGGAATTTGTTTTATTTAATTATTTATTTTCAATGTTATGCTCACAACTGCATCAAAGGACTAGCTATGTCGTACA TGCAAAAACATTGAGCACACTTGTTGCATTTGTTGGCTTGTTTTCCCTATATTCCTTATAGCTAGATTTTACCTTTCCCT AGCTATATAGGTGTA
CDS sequence (LotjaGi2g1v0165000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAACAAGGGCGGCTTCCATCTCTTCTTTCCGACCCACCGCCGCCGCCGTCACTTCCACTTCTTCCCCCGCCACCAC CGCAACAACCACCACCAGAACCCACCTCCTTAACTCCATCCGAAGCCTCAAAACCCTCGACGCCGCCGTCGCTTTCTTCC ACCAAATGCTCGCCGCGAACCCCTTCCCCTGCGTCAAGGACTTCAACTCCCTCTTCACCTTCGTCGCCAGGACCAAACAC TATGCCGCCGCCATCTCCCTCATCAAGCGCGCGCACTCCTCCGGCGTCGCGCCAGACATCTACACTCTCAACATCGTCAT CAACTGCCTCTGCCACCTTCGCCGCACCGCCTTCGGGCTCTCCGTCCTCGGCCTCGTCTTCAAGACCGGGCTCCGGCCAA CCACGGCGACGCTCAACACCATTGTTAACGGGCTCTGTCTCGAGAACAATGTAGCCTCAGCTGTCACATTCACTCGCCAC ATGGAAAATGCAGGGTATCAACCTAACAGTTACACTTTTGGGGCAATAATCAATGGTTTTTGCAAAATTGGGGACACAGA ATCTGCTGTGTTGTGTATGAGAAACATGGTTGAGAGACACTGCGAACCGAATGCGGTTGTGTACAATGCAATCATGGATG GTCTTTGCAAAGATGGGTTGGTGAATGAGGCTTTGAAATTGTTCTCAGAGATGAAGAATAGTAAAGGTATTCAACCTACT ATTGTTAGTTACAATTGCTTGATTCAGGGGCTTTTTAAGTTTGGTAGATGGAAAGAGGGTGCAGGTTTGTTATATGAGAT GATGCAGAAGGGTGTGATGCCTGATGTGCAAACGTTTTCTATTTTGGTTGATGGGTTTGGCAAGGAGGGGTTGGTTTCTG GGGCGAGGTGTGTGATGGGTTTCATGGTTCATGTGGGGGTGGAGCCCAATGTTGTTACTTATAACTCGTTGATTGGCGGG TATTGTTTGCGACATCAAATGGAAGAGGCCATGAAGGTGTTTGATTTAATGGTTAGGAGGGGCTGTTTGCCGAGTGTTGT GACTTATAATTCGTTGATTCATGGGTGGTGTAAGGTTAAGGATGTTGATAGGGCTATATGTCTGTTGGGTGAGATGGTTA ATGAAGGGTTGAAACCGGATGTGGTGACTTGGACTGCTCTTGTAGGTGGGTTTTGTCAAGTGGGAAAGCCACTGGCTGCT AAAGAATTGTTCTTTACAATGAAGGAACATGGACAGGTTCCTAATCTTCAGACTTGTACTGTTATATTGGATGGTCTGTT CAAATGTCGTTTTCATTCTGAGGCGATGTCGTTGTTTAGGGCAATGGAGAAAAGTGATATCGATCTTGATATTGTGGTTT ACAATGTTATGCTTGATGGAATGTGCAAAGCTGGAAGACTGCGTGATGCGAAGAAACTTCTTGCTCGTCTGCTGGCTAAA GGGTTGAAATTTGATACCTATACTTTTAACATAATGATCAGAGGTCTGTGTTGGGAAGGACTACTGGATGAGGCTGAAGA GTTGCTTATGAGAATGGAAGAGAATGGATGTCCACCTAATAGGTGTTCTTATAATGTCTTTGTCCATGGATTGCTGCGAA AACTTGATATTTCAAGGTCAGAAAAGTACCTTCAAATAATGAAATGTAAAGGTTTTCCAGTAGATGCTAACACCAGAGTT GCTTATATGCATTATAATCTGCTAATAAAGGAGATAATGCATTTCAAGAGTTGCTCCAGAACTGAAATTTGTTTGTATTT AATCTCTCTATGCATTATTTGA
Protein sequence (LotjaGi2g1v0165000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRTRAASISSFRPTAAAVTSTSSPATTATTTTRTHLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKH YAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDGLCKDGLVNEALKLFSEMKNSKGIQPT IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA KELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCKAGRLRDAKKLLARLLAK GLKFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTRV AYMHYNLLIKEIMHFKSCSRTEICLYLISLCII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| Gene3D | 13 | 152 | 140 | 3.7E-18 | ||
| ProSiteProfiles | 29 | 63 | 35 | 6.182 | ||
| PANTHER | 43 | 232 | 190 | 5.5E-118 | – | |
| ProSiteProfiles | 64 | 98 | 35 | 6.796 | ||
| ProSiteProfiles | 99 | 133 | 35 | 8.583 | ||
| Pfam | 133 | 182 | 50 | 2.9E-10 | ||
| ProSiteProfiles | 134 | 168 | 35 | 9.032 | ||
| TIGRFAM | 137 | 169 | 33 | 0.0018 | ||
| Gene3D | 153 | 266 | 114 | 7.1E-34 | ||
| ProSiteProfiles | 169 | 203 | 35 | 11.06 | ||
| TIGRFAM | 171 | 205 | 35 | 2.0E-7 | ||
| Pfam | 203 | 253 | 51 | 4.5E-18 | ||
| ProSiteProfiles | 204 | 239 | 36 | 11.685 | ||
| TIGRFAM | 206 | 240 | 35 | 2.1E-9 | ||
| PANTHER | 235 | 396 | 162 | 5.5E-118 | – | |
| ProSiteProfiles | 240 | 274 | 35 | 11.718 | ||
| TIGRFAM | 242 | 276 | 35 | 3.7E-7 | ||
| Gene3D | 267 | 337 | 71 | 4.0E-19 | ||
| Pfam | 270 | 296 | 27 | 1.5E-5 | ||
| ProSiteProfiles | 275 | 309 | 35 | 9.734 | ||
| TIGRFAM | 278 | 311 | 34 | 3.3E-4 | ||
| Pfam | 306 | 338 | 33 | 8.1E-12 | ||
| ProSiteProfiles | 310 | 344 | 35 | 13.811 | ||
| TIGRFAM | 312 | 345 | 34 | 4.6E-11 | ||
| Gene3D | 338 | 408 | 71 | 3.2E-20 | ||
| Pfam | 344 | 393 | 50 | 2.1E-15 | ||
| ProSiteProfiles | 345 | 379 | 35 | 12.858 | ||
| TIGRFAM | 347 | 381 | 35 | 1.2E-9 | ||
| PANTHER | 377 | 558 | 182 | 5.5E-118 | – | |
| ProSiteProfiles | 380 | 414 | 35 | 11.783 | ||
| TIGRFAM | 382 | 415 | 34 | 8.9E-6 | ||
| Gene3D | 409 | 479 | 71 | 3.8E-17 | ||
| ProSiteProfiles | 415 | 449 | 35 | 9.197 | ||
| TIGRFAM | 418 | 450 | 33 | 2.1E-4 | ||
| Pfam | 418 | 446 | 29 | 0.0021 | ||
| ProSiteProfiles | 450 | 484 | 35 | 11.816 | ||
| Pfam | 450 | 497 | 48 | 1.2E-14 | ||
| TIGRFAM | 452 | 485 | 34 | 5.3E-7 | ||
| Gene3D | 480 | 579 | 100 | 4.1E-17 | ||
| ProSiteProfiles | 485 | 519 | 35 | 13.998 | ||
| TIGRFAM | 487 | 520 | 34 | 9.2E-9 | ||
| ProSiteProfiles | 520 | 554 | 35 | 7.783 | ||
| Pfam | 523 | 552 | 30 | 1.1 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0165000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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