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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0165000 |
| Transcript ID | LotjaGi2g1v0165000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein; TAIR: AT1G12700.1 RNA processing FACTOR; Swiss-Prot: sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial; TrEMBL-Plants: tr|A0A072UVT5|A0A072UVT5_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi2g1v0165000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:57473296..57484417) extracted from Lotus japonicus Gifu genome v1.2.
GCTGGATGGAAGAAGACCCTCAGGGAACTTCCATGTTGATCTCAAATGATGTAAATTTAGCAGCTTCTGTTGTTGAATGA AGACAGTACTTAAACTTCAAAAAAATAAAAAACCCTAGTGACTCGTGTGGAGGTGTGTTTGATATGGTGGCAACATATCA TGGAATTACAAGTTTTTTGAACACCTTCTCTCCTCTCACAGGCACAGTCATCGTGGCAAAGTAGTGACGGATAGTCTCTG TTCCAATTATTCAGGATGGCACCATGACGATTCCTCTCAAAACAAAGCCTACTTGAGAACCCAACTCAACTCGCTCTCAG ACTCACTCGAAGCACTCCTCCTCTGTGCTGAGTCACAGACACCGAGTCACTCCTCACAATGCGAACAAGGGCGGCTTCCA TCTCTTCTTTCCGACCCACCGCCGCCGCCGTCACTTCCACTTCTTCCCCCGCCACCACCGCAACAACCACCACCAGAACC CACCTCCTTAACTCCATCCGAAGCCTCAAAACCCTCGACGCCGCCGTCGCTTTCTTCCACCAAATGCTCGCCGCGAACCC CTTCCCCTGCGTCAAGGACTTCAACTCCCTCTTCACCTTCGTCGCCAGGACCAAACACTATGCCGCCGCCATCTCCCTCA TCAAGCGCGCGCACTCCTCCGGCGTCGCGCCAGACATCTACACTCTCAACATCGTCATCAACTGCCTCTGCCACCTTCGC CGCACCGCCTTCGGGCTCTCCGTCCTCGGCCTCGTCTTCAAGACCGGGCTCCGGCCAACCACGGCGACGCTCAACACCAT TGTTAACGGGCTCTGTCTCGAGAACAATGTAGCCTCAGCTGTCACATTCACTCGCCACATGGAAAATGCAGGGTATCAAC CTAACAGTTACACTTTTGGGGCAATAATCAATGGTTTTTGCAAAATTGGGGACACAGAATCTGCTGTGTTGTGTATGAGA AACATGGTTGAGAGACACTGCGAACCGAATGCGGTTGTGTACAATGCAATCATGGATGGTCTTTGCAAAGATGGGTTGGT GAATGAGGCTTTGAAATTGTTCTCAGAGATGAAGAATAGTAAAGGTATTCAACCTACTATTGTTAGTTACAATTGCTTGA TTCAGGGGCTTTTTAAGTTTGGTAGATGGAAAGAGGGTGCAGGTTTGTTATATGAGATGATGCAGAAGGGTGTGATGCCT GATGTGCAAACGTTTTCTATTTTGGTTGATGGGTTTGGCAAGGAGGGGTTGGTTTCTGGGGCGAGGTGTGTGATGGGTTT CATGGTTCATGTGGGGGTGGAGCCCAATGTTGTTACTTATAACTCGTTGATTGGCGGGTATTGTTTGCGACATCAAATGG AAGAGGCCATGAAGGTGTTTGATTTAATGGTTAGGAGGGGCTGTTTGCCGAGTGTTGTGACTTATAATTCGTTGATTCAT GGGTGGTGTAAGGTTAAGGATGTTGATAGGGCTATATGTCTGTTGGGTGAGATGGTTAATGAAGGGTTGAAACCGGATGT GGTGACTTGGACTGCTCTTGTAGGTGGGTTTTGTCAAGTGGGAAAGCCACTGGCTGCTAAAGAATTGTTCTTTACAATGA AGGAACATGGACAGGTTCCTAATCTTCAGACTTGTACTGTTATATTGGATGGTCTGTTCAAATGTCGTTTTCATTCTGAG GCGATGTCGTTGTTTAGGGCAATGGAGAAAAGTGATATCGATCTTGATATTGTGGTTTACAATGTTATGCTTGATGGAAT GTGCAAAGCTGGAAGACTGCGTGATGCGAAGAAACTTCTTGCTCGTCTGCTGGCTAAAGGGTTGAAATTTGATACCTATA CTTTTAACATAATGATCAGAGGTCTGTGTTGGGAAGGACTACTGGATGAGGCTGAAGAGTTGCTTATGAGAATGGAAGAG AATGGATGTCCACCTAATAGGTGTTCTTATAATGTCTTTGTCCATGGATTGCTGCGAAAACTTGATATTTCAAGGTCAGA AAAGTACCTTCAAATAATGAAATGTAAAGGTTTTCCAGTAGATGCTAACACCACAGAGTTGCTTATATGCATCTACTCTG CTAATAAAGGAGATAATGCATTTCAAGAGTTGCAGCAGAACTGAAGTTTGTATGTGTTTAATCTCTTTATGCATTATTTG ATGAGGATTTATGTCATGTTTTAAGATATCAGACTGTCAGCTAGGCCACACTTAATGGTCAGAGCACATCCTTAAGACCA TTGGGGGTTCAACTGCCCAAAATCATTCAGAACTTGATGGTAAAAAGTACAACGGAGACACTCTATGAAATTCCGATCGG ATTGTGACACTGATGGTCTTCTGAGTGCTAGATCATCCAAGAGACTTGAGAAGCCTGCATATTTTGACCAGACATTAACC CTGTTTGATGCCAACAAGATGGGAGATGGTGGAGCTGTGTTTTTCTAGCTTGCAATTGAAATGTTTTGATTGAGACATAA TCGTACGTTTGGTGTATGGGTCACATGGAGGTATGTCCAAATCACCTAAAATTCTCATTCCTTGCAAACATTATATTCAA TGTTTTTAGTTTTACCTGCTGAAAACTTCCCTCATTTAAACCTGCAACATTGAATGATACGTTTAAAATGTTCATATGGT ATATATTTATCTGTAAAATTTCTAATTCAAGATTCTACTTTAATCTGAATGATACATACAAAGAAAAAGAAAAAAGAAGT TGAAGAGGGGACTTCAGGAGACATTCGGCTCCAAACCATATCTATGAAGTATTTATCAGCATTAACAGTATCCTGAAATT CAGCATTGATTTCAAAAATATGGCAGTGTGTTTACCATTGTTTTCTAACACACACACACACACACATATATAAATGGATT TAACTGAGGAAGGTATTGTTAAAATACTGAGAACAATGTTGTGGAATTGCTACTTCAATGACATTCTTCTTTATTTTCAG GTTGCCACAGTAGAGCTAGAATATCCTTTCGATGGTTGGCAGTGGGCTAAACCAGTGTGTCCTAAGCTCTGTCATGTGGA TTTGCTAAGCAAGATTGTCCTTGATCAGATTATGAACATTGATTTGGAATTGTTGCTTAATGGTAATCGCATGACCTATA ATAGTATCAGAAGTTCACATCATTGTCACTTGAAATCCTTACGATGCCCCATTGTCACTTGCTGATATGTGGGAAAGTCT CTATGATTTGAACTTTGTGGATGACATGTGGCCATTTGGAGGTGTTCTTGTGATGTCTTTGTTCAGGGATTTCTGTGAGA ACATGATATTTCAAGGTCAGAAAAGTACCTTCAAGGCTTCAAATATTGAAATGTAAAGGTTTTCCAGTAGATGCTAACAC CAGAGTTGCTTATATGCATTATAATCTGCTAATAAAGGAGATAATGCATTTCAAGAGTTGCTCCAGAACTGAAATTTGTT TGTATTTAATCTCTCTATGCATTATTTGATGAGGACTCATATCATGTTTGAAGAGATCAGAATGTCAATTAGGCCTCTTA TTGGTCAGAGCACATCCTTAAGACTATTGTGGGTTCAGCTACCTAGAATCATACAGAACTGGATGGTAGAAAGTACAAGG GAGACTCAGAATGATATTAAGCTACAGAATTACAATCTGATTGCGACACTGATGGTCTTCTTAGTGGTAGATCTTCCAAG AGTTCTGAGCAGCCTGCATATTTTGACCAGACTTTAACCCATTTCGATGCCAACAAGATGGAGGAAGATGGTGGAGGAAG ATGGAGGCTGTGTTTTTCTAGCTTGCAATTGAAATGTTCTGATTGAGACATAATTGTATGTTCGGTGTATGGGGCACATG AAGGTATGTTCAAATCACCTATAATTCTCACTTCTTGCAAATAATTATATTTAAATGTTTGTAGTTTAATCTGCTGAAAA CTTCCCTCATTAAAACCTGCAACATTAAAAATACGTTTAAAATGTTCCTAAAAATACGTCTAATTCAAGATTCCGCTTTA ATCTGAATGATACATAAAGAAAGGAAAAAATAAAAAAGATGAAGAGGTGACTTCAGAGGCATTCAGCTCCAAACCATATC TACAAAGTATATATCAGCATTAACAGTGTCCTGAAAGCATTGATTTTAAATATATGTACCATTGTTTACTAACTATATAG ATATATATATATATGGATTTAAGAGAGGACGATCATTGATAAAATACAAGATTAAAATAAATACGCGTGGTATTGATGAG TTGGACTTTAGTTATCTACCGGTATCGGAATCGCAAGTTTGGGCGGCGATTCCGCTTCAGATTAGTCCGCTTCTTCTTTG AGGAGCAAGCCTATTCTGCAGTCAACGTTCTAGATGGCCTTAGGGTGGGTGGTGCTGCGCTTTCGGTGGCACCGGTGAAG TTTCCAAGGGACAAGTCGAGAAGCTCTGTTTCTTAGGGATGTAGCGGCAAGGATTCACCGGCGTCGATGGCTGACCCTTA CAAGGCTAGCGTTCGTGGGCAGAAATCTTGGAGGGAGGCTCTTGTAGGTAAGTGTTGTTTGTCTGTTACCTCTCCTATTG AAGAGCTGAGGGGGCTGGATCGTGGTTGCTTTTTGGGGGAAAGAATCCCTATTGAATTTCTTTTCCCTGAAATTGGTTAT GGGTCTCTTGGTTCGGATGAGGTGTTGCCTTCCTCTCCTCTGCAGCTTCTTTCATCTGTAGGGGTTAGCGAGGTTGGAGA GTTTGGAGAGGGAGTTAATCTTGGGGAGGCGGAGGTAGGGGCCAGTCATGGGCAGGAGGTGCTCTTGCCTAGGAGACGCG GGCGCCCTAGGAAACTGGGTCGCAAAGCCCGGTTAGCTGCTGGCATTGTTGGTAGAGACACCAAAGGGAAGGATGTTCGC TGTCGAGGTCGGCCAAGGAAGAATGACAGCAAAGTCAAAGAGGTGAGCATTCATAAGGGCTCACCTTCCTCTAGCCCGCA AGCAGAGGACCCTTCTAAAGGCCGTCAGTTGATGCTCTTGCCACCGGAGTTGTCAGATCCACGAGGCATTTTGACTAGAG CAAGGAGTGCTCTTCTGATGGGGAAACGATTGGGATTAGAGTACTCTTGTTCTGATACCGTTGCCTTGAACCAGATTGCG GCCCAGATTTCAGCGCGTTGAGCTTTGTAGGGTTGAACTTTCTGGTTGAGGTTGTTGCTCGACCTCTCTGTTTGGTTGTT TTGTCCTTGGGGTTTTGTGGGGGGTTTTCTTTTTAGGTTTGTTTGTTCTAGTGGGCTTTTTGTTGTATAGGGGAGGGTAT GCTTTTGGTCGGTGTTGTATAGGGCGTTCGTGATTTTTTGTTAGAGCTGATACTCTGCTCCCTCTGCTGTTTTTGAAGAT GGCGGGTACCTTCTCCTCTTCATGAGGTGGCTGCTCTCTTGTTTTCCTCTCTTTTATCATATATTTTTTGCTTTCGATAA AAAAAAAGGATTAATGATCAGGACTAAAATGGTATCATTTATAAAATATAATATAATTAAAAACCATAAGAATTTTACTG GAAAACCAATCTAGATGCTTAATTCCTTCACCATCAATGTGATTGTTGCTGGTTATTCACACCGTGATTGGAACTTGTGT CTAAATCATGTTATTCTCTACTGGATTCTTTGATAATTTCTATACATGTGGTTGTTCATTATTTTGTTTTATTGTTTTAT AGGAATCAAGATTAGAACTGATCAAGGAGATTCCACCATGATTAGCTGTGATAATAGACTTGAAAATGTGCCTAAAGTTG ATGCAAAGAGTCACTACACAAGGTATGTGAAGTACAAAGGTTTTAGTTTTCTTATGGTTCATGTTACTAAATCAAGAACA TATTGTTTAGTGATTGGTCAAGAGATCCTTTGGTCAAATGAATGTTTTTCGTGCAAAAAAACATGCAGAAAGGGAAAATA AAAGCTTTGTAGCACATGATGAAACAAGGGTAGGATGCAAGGCATTGTTGTATATAAATTTTTTTTTGAAGAAAAGTGGA TTGTTTCTAGATTTGTAAGACTTCTCCAAGAAGTTCACAATTTCATCGAGTACATAGAAAGAAAATTAACATGCAAAGAC AACTTATTGATATGTTCGATGATTCTGGTTTGCGTTGCTGAAAATGGTGGTATCGATAATGTTGGATTTAGTCAACAAGA TGTTATTGATTGACGCTATCATATTTTAAGAACGGACAATAGAAGAATCCCGCATTTTTAATGCATTTCAAATGGATGTA TAAGGGAAATTGCCAAATTGTTTGTGTTGATTCAAGGTCTAGAATGACTTACAAATATTTTGGTGATGTGGTGACTTTTG ATCCCGCATACTTGGCCAATAGGCACAAAATGCCTTTTGTTCCTTTCACAGTAGTTAATCATCATTAACAATCCATTCTT TTTGGTTGTGCTCTCTATTATGGGATGAAATTAAAGAGTTTTGTTTGGTTGTTAAGTACTGGTTTAGAAGCAACATTTGG AGTTTGTCCTATAATTATTATCACATACAAGGATGTTGTTATCACTAATGCAGTTGCATTGGTGTTTCTAGAGGTTAATC ATTATTTTATGTTGCACATAGAGAAGAAAGTTTCAAAGTACTTGAGCTACTTTTATCATGAACATATTGATTTTAAAAAT CAATTTTACAAGTGCATTTATCAATTTATCACTGTTAAAGAGTTTGAATCTGATTGGGAAGCAATAATACTTAAATATGG GTTGCAAGATATAAGTGGTTGGAGAAGATATATTTCATTCGAGCAAAATGGGTTTCTGCTTTTGTTCGTGACAATTAATG TGTTGAAATGACATCACTCAAAAAAGTGAAAGTAAAAATAAGTTCTTTAAGGATTTTTTGAATTCGAGTACTCTATTGAA CAAGTTTGTGACACAATGTGATAAGGCTCTTGATGCACAATATGATAAGGCTCTTATCATTGTGTCACAAACTTGCTCGA CGGAATACTCGAATTCAAAAAATCTTTGAAGAACTAATTCTTATTTTCACTTCTTTGAGTGGTGGACATTGCGGCAGACG TACGGATCCATTTTTCTCAAATGGAATATATCTTCTCCAGCCACTTATTATCTTGCAACCCATATTTTTCTATCATTAAA TCAGATTCAAACTCTTCAATATGCTCATGATCAATGTAGCTCAAATAAATTGGAACTTTCTTCTCAATGTGCCACATACA ATAATGATGATTAACCTCTGGAAACACCCTTACGACTGCATCAGTGATAGCAGCATCTTGGTTTTTAGGACAAACTTCAA ACATCACTTCTAACCAAGTACTTAACAACCAAACAAAACTCTCTTCAATTACATCCCATAATAGAGCACAACCAAAAAGA GAGGATTGTTAATGATGATTAACACCTGTGAAAGGAACAAAAGACATTTTGTACATATTGGTCAAGTATGTTGGATCAAA AGTCACTGCATCACCAAAATATTTGTAAGCAATTCTAGACCTTGTATCAACCAAAAACAATTTGCCAATTTCCCTTCCAC ATCCCCTTGAAATGCATAAAAAACTCAGGATTCTTCAATTGACCGTTCTTTTTTATTAAAATATGATAATATGAGCATCT ACTTTTTCTAATTGTTTTTCCCTCTTGTGGCTTAAATAATCAATAACATCTTGTTGACTAAATCCAACATTATCAATATC TCCACTTTCAACACACAAGACATGTTATTTTGCTAGGACACGAACTGGAATCACCGAGCAAATCAATAAGTTATCTTTGC ATGTTAGTTTTCTTTCTATGCACTCGGTGAAACTGTGAACTTCTTGGAGAATTAAGTTCATGATTATGATCTTACAAATC TAGAAGCAATCCATTTTTCTTCAAAAAAAAAGTCCATTTACAACATTGTCTTGCATCCTAACCTTGTTTCATCATGTGTT ACAATGCATTTATGTTCCCTTTCTACGAGTATTTTTTGCGCTAAAGCATTCTTTTGAATAAAGGATCTCTTAACCAATCA TCATACTATTTGTTCTTGATTTAGTAACATGACTCATACGAAAACTAAAACCTTTGTTCTTTGCATACCTTTGTTTAGTG ACTCTTTGCATCTTCAATTGATTCAAACTTCATTCCTTTATAGGGCTATAATGGTAGTTCAGTATTGAAATGATTCACTT TAGGAACACTTTCAAGCCTATTATCGCAGTTAATCATAGTGGAATATCCTTGATCATATGTAATCTTGATTCCTATAAAA AAAAAATAATGAGCAACCACGCGTATAGAAATTATCAAAGAATCTAGTTGAGAATGACATGATTTAGATATAGGTCTCAA TCACTATGTGAATAACCAACAAAAAATAACACTTTGATGGTGAACGAATTAAGCATATGGGTTCATGATGAGAGAATCAT CAACTGAAGGAAGCCGAAGAAAAATAACCTGTTTTCTGAGAAAGATTCTCTAAGATTAGATAAAACCACCAAAATTGCAA GTTCCAATGCTTGGGCGACAAAAAAAAAACAAGGAATTAAGTGGTTACAATGAACACCTGTATTAGAGATGAGGAATCAT TTGCTAAAGAAATATCAATGAGATTGAGGCATTGATCGTCACCCTTTCTCAAAGAATCATTTGTTTTGGAGATCTCTAGC TGTTTATAACTGTTGGTTGGCTTCATGAAAAAATACAGAAAAATCAATCCTAGTTCTCCCTCTCAAACTCCATGTAGATG TAGTTAAAAACCTTTGTTCTTCACAAGGTTAGTGATGACAATGAAATGCACAGATGGAGCACAAGCGTATGTGAAAGGGT TGGAGAGTGTAGGTTTTGGGTGAGATACATGCTCTATTTAATTAAACCAAACTATTTTAGAAAACTTGTCTGACCGGTTA AAAAGAACTAAGGCTATTGGAGTATTGTTTTGTATAAACATGTTTACACTGTTGTACCTCCTTTAAACTCTTTATATAGA GATTTTATTATTTAATATTCATATGATCTTTCAGTTTTTTAGATAAAAATGTTTATTTAAAATGGAATAAAAATAAATAA TAATATGAGAGTTAGTAGGCCGGCCGTTTATAAGTGGTATCCGCAACTAGCAAGCTTGACAGATCCATTTGTCCATCCAT GGTAATTAATTGAAGCATAACTTGAAAAATAAAATTAACACTTAAACTAAAATAAGACCTATAAAAGAGAAGACTAGATT ATAATTTTCTCTCTATAACTTTATTTACCTACAGAAAATACTTAAAATTAAAAAAAAATAATACATAGCTGAATATAACC TATTATTTTTGTGTCTCTTCTACATATTCTTTTCCCTATGTTTCTCATAATAGCATTTAGTCACAGATTACAGTTCTTTT TGAAGTATGCAGAAGTTGTACCACCATGTACTCTTCCATTCCATTTAAATGGCTAAGAACAGCAAAATTAAAGTGTGATT GATAGTGTTATTTAGTTTACCAAAACCATACTGAATAACTCATCCAACTTAGTTGATTAAGCAGGCTCATACCTTTGATG ACATGCTTGTATGAATACTAGATGAAAATGGATTCAGGAATACACTTGACCTACCATATTCACTTTCTAAGTCACTAACA GCATCAACACCTTCAACCTCAAGCTTTTGTTTTGCTGAAAGGACATGTGGTTCATTTGCAACTTCATCTTCAAATACAAC CCATACCTTGCTTATTTTAGTCTCTAATGTCCATGATAAAAAACTTGGGGTTGATGACAAATTAATTTCAATTTTCTCTT CATTCTTTATGCTATCCTTTGCTTCCACTGCCAATTCTATTTCTGCTGATTTTTTGAAGCGGCCTGAAATGGGTGGTGAC TTTGAAGCTGTAAGATGATTTTGCGAACAACCTATTTGATTTAATGCCTCTATGTGATTCATACTGATAATCTGAACAGA AGGGTATTCCAAGTTCCTGTTTTCAACCACTTTTTTGCAAGTTTCATACAGATCATAAAGCTTCTGGCTCTGCAGTGAAG CTTTCTTGAGTATTTCACACCCTTGGCCTCTAGCTGATTCTGCAAGATCAAAGAACATGTTCACAAGAGCTGCAAGGCCT TCAGAAAATGTCATGTAAACTTGGAAGCTCTCCCTCAAGGTGTTTCTCATTGCAGCTTGAGCCAGGCCATGATAATCTGA GTGCAAAACATCATGTGGGGAGCATTCCAACACCCTATCAATCAGAACTTGGCACTTTGGCAATGTTCTAAATGCCAAGT CGAAGGATTTCTCGTCGTAGCGCCTAAATTCTAACCCTTTGGACATGAGAGGTTCAAGTTTCCCAGCTTGATTGATTAGC CAACTCATCCTCTCTTCAAGATAAGCTGCATATTTTTGTAGGAAATTACCAAAGGGTTCTGAATTGTTCTTTGTGATTGT GACACACCTTATGCTGATTTGAAGATGGCCAGAGACATGTGCTCTGCATAGCTCTTGCTCAAAGGACCTGTTTCCTCCTC GAAGAAGGCGGTGAATCAGGACAAGGGTCTTGAGGGCCACAAGATGATCCTTGGTTTTGCCGAGGCGGCGCGAAAGCCTC TCAGCGAGAAAAGGAATGGACCCTGGAGAGTTGGATACCAGGAAGAGGATTTCATGCATGTATTTGTCATCTATGGTGCT GTTATCATGGCCGGTGGCGCGCAGGACCGCGATCTCTATGCCGGAAAAGCCATCATGTTGGTAATGGTAGATCATGGCCT TGCCAATAGAAGCATGATCTTTCATTGAGCCAAGTGCTAAACGGAGCTTGCCTTGTATATCCACACCCATTAATTCTTCT TTTGGTGATAAAGAAAAAAGAACTTCGATATGATGCTAGCTAGAACACTAATGAAACAAATTGCTGTTGTGTACTGCAGG GGTATACACATATAAAGGTCAGTGGAGAAACAGAGTGGCCTTAAAAAATTAGCAGCATCAAATCTTTCATATTTTAAACA GAGAATTGTAATATGCATACAAGAACATTCATCATATAAAGATTGTTATATGTGGTTGCTTAGAAGTCTATATACCCAAC AACAACACTACAATATCCTATACAGTAAAAGGCAAATATCCAAGTACAAAGTCAACGGGTATAATCAAAAAGCATCCTTT TC
CDS sequence (LotjaGi2g1v0165000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAACAAGGGCGGCTTCCATCTCTTCTTTCCGACCCACCGCCGCCGCCGTCACTTCCACTTCTTCCCCCGCCACCAC CGCAACAACCACCACCAGAACCCACCTCCTTAACTCCATCCGAAGCCTCAAAACCCTCGACGCCGCCGTCGCTTTCTTCC ACCAAATGCTCGCCGCGAACCCCTTCCCCTGCGTCAAGGACTTCAACTCCCTCTTCACCTTCGTCGCCAGGACCAAACAC TATGCCGCCGCCATCTCCCTCATCAAGCGCGCGCACTCCTCCGGCGTCGCGCCAGACATCTACACTCTCAACATCGTCAT CAACTGCCTCTGCCACCTTCGCCGCACCGCCTTCGGGCTCTCCGTCCTCGGCCTCGTCTTCAAGACCGGGCTCCGGCCAA CCACGGCGACGCTCAACACCATTGTTAACGGGCTCTGTCTCGAGAACAATGTAGCCTCAGCTGTCACATTCACTCGCCAC ATGGAAAATGCAGGGTATCAACCTAACAGTTACACTTTTGGGGCAATAATCAATGGTTTTTGCAAAATTGGGGACACAGA ATCTGCTGTGTTGTGTATGAGAAACATGGTTGAGAGACACTGCGAACCGAATGCGGTTGTGTACAATGCAATCATGGATG GTCTTTGCAAAGATGGGTTGGTGAATGAGGCTTTGAAATTGTTCTCAGAGATGAAGAATAGTAAAGGTATTCAACCTACT ATTGTTAGTTACAATTGCTTGATTCAGGGGCTTTTTAAGTTTGGTAGATGGAAAGAGGGTGCAGGTTTGTTATATGAGAT GATGCAGAAGGGTGTGATGCCTGATGTGCAAACGTTTTCTATTTTGGTTGATGGGTTTGGCAAGGAGGGGTTGGTTTCTG GGGCGAGGTGTGTGATGGGTTTCATGGTTCATGTGGGGGTGGAGCCCAATGTTGTTACTTATAACTCGTTGATTGGCGGG TATTGTTTGCGACATCAAATGGAAGAGGCCATGAAGGTGTTTGATTTAATGGTTAGGAGGGGCTGTTTGCCGAGTGTTGT GACTTATAATTCGTTGATTCATGGGTGGTGTAAGGTTAAGGATGTTGATAGGGCTATATGTCTGTTGGGTGAGATGGTTA ATGAAGGGTTGAAACCGGATGTGGTGACTTGGACTGCTCTTGTAGGTGGGTTTTGTCAAGTGGGAAAGCCACTGGCTGCT AAAGAATTGTTCTTTACAATGAAGGAACATGGACAGGTTCCTAATCTTCAGACTTGTACTGTTATATTGGATGGTCTGTT CAAATGTCGTTTTCATTCTGAGGCGATGTCGTTGTTTAGGGCAATGGAGAAAAGTGATATCGATCTTGATATTGTGGTTT ACAATGTTATGCTTGATGGAATGTGCAAAGCTGGAAGACTGCGTGATGCGAAGAAACTTCTTGCTCGTCTGCTGGCTAAA GGGTTGAAATTTGATACCTATACTTTTAACATAATGATCAGAGGTCTGTGTTGGGAAGGACTACTGGATGAGGCTGAAGA GTTGCTTATGAGAATGGAAGAGAATGGATGTCCACCTAATAGGTGTTCTTATAATGTCTTTGTCCATGGATTGCTGCGAA AACTTGATATTTCAAGGTCAGAAAAGTACCTTCAAATAATGAAATGTAAAGGTTTTCCAGTAGATGCTAACACCACAGAG TTGCTTATATGCATCTACTCTGCTAATAAAGGAGATAATGCATTTCAAGAGTTGCAGCAGAACTGA
Protein sequence (LotjaGi2g1v0165000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRTRAASISSFRPTAAAVTSTSSPATTATTTTRTHLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKH YAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDGLCKDGLVNEALKLFSEMKNSKGIQPT IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA KELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCKAGRLRDAKKLLARLLAK GLKFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTE LLICIYSANKGDNAFQELQQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| Gene3D | 12 | 155 | 144 | 3.5E-18 | ||
| ProSiteProfiles | 29 | 63 | 35 | 6.182 | ||
| PANTHER | 44 | 233 | 190 | 8.8E-125 | – | |
| ProSiteProfiles | 64 | 98 | 35 | 6.796 | ||
| ProSiteProfiles | 99 | 133 | 35 | 8.583 | ||
| Pfam | 133 | 182 | 50 | 2.8E-10 | ||
| ProSiteProfiles | 134 | 168 | 35 | 9.032 | ||
| TIGRFAM | 137 | 169 | 33 | 0.0017 | ||
| Gene3D | 156 | 233 | 78 | 2.6E-22 | ||
| ProSiteProfiles | 169 | 203 | 35 | 11.06 | ||
| TIGRFAM | 171 | 205 | 35 | 2.0E-7 | ||
| Pfam | 200 | 232 | 33 | 2.8E-13 | ||
| ProSiteProfiles | 204 | 239 | 36 | 11.685 | ||
| TIGRFAM | 206 | 240 | 35 | 2.0E-9 | ||
| Gene3D | 234 | 300 | 67 | 5.1E-17 | ||
| PANTHER | 235 | 428 | 194 | 8.8E-125 | – | |
| Pfam | 239 | 287 | 49 | 1.0E-12 | ||
| ProSiteProfiles | 240 | 274 | 35 | 11.718 | ||
| TIGRFAM | 242 | 276 | 35 | 3.6E-7 | ||
| ProSiteProfiles | 275 | 309 | 35 | 9.734 | ||
| TIGRFAM | 278 | 311 | 34 | 3.2E-4 | ||
| Gene3D | 301 | 373 | 73 | 7.3E-25 | ||
| Pfam | 306 | 338 | 33 | 7.9E-12 | ||
| ProSiteProfiles | 310 | 344 | 35 | 13.811 | ||
| TIGRFAM | 312 | 345 | 34 | 4.4E-11 | ||
| Pfam | 344 | 393 | 50 | 2.0E-15 | ||
| ProSiteProfiles | 345 | 379 | 35 | 12.858 | ||
| TIGRFAM | 347 | 381 | 35 | 1.1E-9 | ||
| Gene3D | 374 | 444 | 71 | 3.7E-16 | ||
| PANTHER | 376 | 563 | 188 | 8.8E-125 | – | |
| ProSiteProfiles | 380 | 414 | 35 | 11.783 | ||
| TIGRFAM | 382 | 415 | 34 | 8.6E-6 | ||
| ProSiteProfiles | 415 | 449 | 35 | 9.197 | ||
| TIGRFAM | 418 | 450 | 33 | 2.1E-4 | ||
| Pfam | 418 | 446 | 29 | 0.002 | ||
| Gene3D | 445 | 512 | 68 | 1.5E-19 | ||
| ProSiteProfiles | 450 | 484 | 35 | 11.816 | ||
| Pfam | 450 | 497 | 48 | 1.1E-14 | ||
| TIGRFAM | 452 | 485 | 34 | 5.1E-7 | ||
| ProSiteProfiles | 485 | 519 | 35 | 13.998 | ||
| TIGRFAM | 487 | 520 | 34 | 9.0E-9 | ||
| Gene3D | 513 | 580 | 68 | 4.5E-5 | ||
| ProSiteProfiles | 520 | 554 | 35 | 7.783 | ||
| Pfam | 523 | 552 | 30 | 1.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0165000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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