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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0179300 |
| Transcript ID | LotjaGi2g1v0179300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|I1N6X6|I1N6X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0179300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60101158..60106056) extracted from Lotus japonicus Gifu genome v1.2.
GAATTTCTGCAACATGTTGCTAGCATACTTTGTTTGATTTTCGAGACTCACTCACACAGTCACAGACCATTCATATTCCA CACTTATCATTCCAAGCCTTCTTTTATCATGGCTTTGCTACCATCATCCTCCTCCTCCTCTTCCATCACCTATGCATTCA CATTTGATGTGTTCATCAGCTTCAGGGGTTTTGATACCCGCTATGGTTTGGTTTTACCGGCAATCTCTACAAAGCTCTAA CTGATAAGGGAATTCACACCTTCATTGATGATGAGGAGCTTCACAAAGGGGACGAAATCACACCATCACTTGAGAAGGCC ATTGAAAAGTCCAGGATTTTCATTGTTGTCCTCTCTAAGGACTATGCATCATCCTCGTTTTGCTTAGATGAACTTTCCAA GATTCTTGACTGCTCTCAGAAAGAGGGTCGTCTGGTTTGGCCAGTATTTTATGATGTGGATCCTTCTGATGTGCGGAAGC AAACTGGGAAGTTCGGAGAAGCAATGGTCCTGCATATGGAGAGGTTCAAAGACAACAAGGACAAGTTGCAAAAATGGAGG ATAGCTCTACAAAGAGTGGCTAACTTCTCGGGTTGGCATTTCAAGCATGGGTACTTTTCTTATACTATTTCCTTGCGTTA GTAGATATTGTCTAATTATTACAATTTGAGTTATAGTGAATGAATGTAAAAAAAGAACATGATGCATTATTATGACTTTA CACAAACTTCCCTTCTCATATTGGACAGAGATGCATATGAACACGAGTTTATCGGAAAGATTGTTAATGAAGTCTCAAGA AAGATTAATCGTGTTGCTTTACCTATTGCTGATTACCCGATTGGACTAGAGTCACAAGTGCGACATGTAGTTTCGCTTTT GGATGTTGGGTCTATTGATAGAGTTCACATGGTAGGGATCCATGGAATAGGTGGAATTGGTAAAACAACACTTGCTCTAG CAGTTTACAATTCCATTGCTGACCATTTTGAAGGTTTATGTTTTTTGGAGAATGTTAGAGAAAATTCAAACAAACATGGG TTACTACATATCCAAAAGACCCTTCTTTTGGCTGTCCTTGGAGGGAAGGAAATTGAGATAACAAGTGTCAAGCATGGAAG TTCAATAATACAACATCGGCTCCAACAAAAAATGGTTCTTCTGATTCTAGATGATGTTGACAAGGAGGAGCAATTAAATC ATGTTATTGGAAGACCTAATTGGCTTGGTCCTGGTAGTAGAGTCATCATCACGACTCGAAACCAACAATTGCTAGCATGC CATGGGGTTGAAAGAACATTCAAAGTGAAAGAGTTGAAGAAGGAACATGCTACCGAATTGTTCAAGTGGAAAGCTTTTAA AAACCAGGAAGTTAATTCAAGTTATGAGGACTTACTGAACCAAGCATTGAGTTACACTTCCGGCCTTCCATTAGCTTTGG AAGTAATAAGTTCTAACTTGTTTGGTAAAACAAGGGAAGAATGGGAATCGACATTAGAACAATATAGAAGGATTCCACCT AGAGACATCCAAAAGATACTTGAAGTGAGCTTTGATTCTTTGGAGGAAGAAGAGAAGAATGTTTTCCTAGACATTGCTTG TTGCTTCAAAGGATATAAGTTGGAAGAGTTCAAGGACATACTTTCTGCTCATTATGGTTTCTCCATAGCAAATCACATTA GAGTGTTGGTTCAAAAGTCTCTCATAAAGAATACTAGTTTGACTGAAAAAGTGACACTACATGACTTAATTGAGGATATG GGTAAAGAAATTGTGCAACAAGAATCACCAAAAGAACCTGGAAACCGCAGTAGGCTATGGTCTCTTGAAGATATATTTGA AGTTTTGGAAGAAAATACGGTAAGCCTAGTATGGATGATTTGGTTGTTTATCTTTAATCTTGATTTAGCCTTTTTGATTA TTCAAAGCTACTAATGTTTATATTACCATTTTCCCGCTTTATAATATTTGCATGTCTCTAAGAACTTGTGTTAATGTCCT AACGTATATGTATTCATTTTGATTGGTTTGTCTTTTTTTAAGGGAACTAGCAAAATTGAAATGATACATCTAGATTTCCC GTCATCTGAAGACGTGGATTGGGATGGAGAGGCTTTCAAGAAGATGAAAAAACTCAAAACACTTATTATTAGAAAAAATC ATTTTTCTAAAGGTCCAGAGCATCTTCCAAATAGTTTAAGAGTATTAGAGTGGTGGAAATATCCTTCACAACGTTTACCA AGTGACTTTTATCCAAAGAAACTCTCCATATGCAAATTACTTGAGAGTAGCTTGGTGTCCTTTGAGTTGCTAAGATCATC AAAGGCAAGTATGATAATGATTTCATATCCTTGATCTTCTTGTGTATGATACATCACTAATATTCATTTGATTCTTATTT TTCTTTTTTATCAGAAGTTCGTGACTATGAAAGTTTTAAATCTCAATCGGTGTGCATCATTAACACATATACCTAACCTA TCTGGTCTCCCAAATTTAGAAGAGTTTTCATTTGCACATTGTTCAAAATTAATTACTATTGACTGTTCCGTTGGGTTGTT GGACAAGCTTAAAATCTTGGATGCTGATTATTGCTCCCAGCTTAGGAGTTTTCCTCCCCTTAAGCTGCCCTCTCTTAAAG AACTCAAGCTTAGATGTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTGGAACAGATGAAAAATATATACGAACTTGAT TTGGGTTGCACTAACATAAGCAAATTTCCACATTCAGTTGAAAATCTTACTCGACTTGATGCAATGACAGTTTATCACTT GCTTCCATCAAGGAGCTTAGTCACGATGCCACAACTAGTATGGCTCAAAATCAGGCAGCAGTGGATATTAGAAGAGGAGG ACGAGAGTGAGAGTGAAGAAGAAGTGATGGATGGTGGAGCTATGGCATTAGTTCCCACGTTGTTTCCTAACTTGAATGAA AGAGAGAGTTCCATTCTTTTGCCTTCAAAAGTAGAATATCTTACTCTCGAAAAGTGCGACCTGTCAGATGAATATTTAGT ATCAGTTCCCTCGTTGTTTCCTAACTTGAAAGAGTTATGCCTAAAGCATTGTTCACTCACAACTGTACCTGAATGCATCA AAGAATGTCGCTTTTTATGGAGGCTTACCTTGGCTTATTGCGAGCAACTAAGAGAGATTTTTGAAGGGATTTTGCCAAGA TTAACCTACTTATCTGTAAAAAAATGTCCATCCTTGAGTTCCAGTTGTAGAAGCATGTTGATGAGGCAGGTTAGTTTTTG ATTTGATTTGTTATGTTTAGAATGTATTTATTGATTTCATCATTATTAATGTTCTACGCTAAATCAGGAACTGCATGAGG CTGTAGACATTCGTCTTCATTTGCAAAACTTAGAAGGAGAAACGATTCCAGAGTGGTTTGAGTACCAGAACAAGGGTCGA TCTCAGTCAGTTTCTTTCTGGTTTCGTAACAACTTCCCTTGCATCTTACTATGTATGCCTTCGCCAAATGTGCCTGGTCA TAATTATTTATTTGTAGATTCCTTCATCAATGGCTATTCATGTGACCGTTTCCGAGTAGATTGGGGTCATACGTGTCTTA GTAGGCTACGCCTAACAGACAAGGATAAATATATAGTTATAGAAAATGGGTGGAACCATGTGGAGGTTATGACTGACAGT GGCTTAGATTGTGGAATTGGAATCCATGTATGGAAAGAGCAAAACACGAAGGATATCCGATTCACGAATCCTTTAGACTT GAACTTGGCACCACTTGAAGAGGATGATGTTAATACTGAGTTGACTCGTTTATAGTATGTTCACATGAGATCAGATGTTG AAGTAAGTAGATCAATCATTCTACAAAAACTTGACTTCACTTAATGGCAAAATATAATTCTTTCTTTTTCGTTCCTAGGA GCACCAAAGAGGAAGGTTGACAGCTGAAAAATTCTTACCGGGCATCTTGAATTATGCAGCAGCACATTATTTAGAATCCA AATTGCAGGAAGTTCTTAAAATACTCCACATATACTGGAACATTGGTTCGTTGGATTCCTTAATTAATTGCAAAAAATTA ATTAAGTTTGCCTTTTGATCTTAGCAATTTGCTTGAACCTTCAACCTTGCTTGATCCAGTATGGTATCCCAATTCTGGGG CAACAAACCACATGACTTCTGATCTTAGCAATTTGCATCACAAGGTTCCTTACACTGGTCATGAAATGGTTCAATTTGGT AATGGTGCAGGTAAACCTATTAAGGATGTTGGCAATACTTCTTTTCGATCCTCTTCTACTTCTTTTCCTCTTGTTTTGAA TAATTTGCTTCATGTTCCTGGTGTGTGCAAAAACCTGTCGAGTGTTTCACAATTCTGTAAGCAGAATAATGTTTTCTTTG AATTTCACTCTGACTCTTGTCTTGTGAAATCTCAGGAAACCGAGGAGACTCTTCTCCAAGGAACACTTAGGAATGGTCTA TGTGCTTTTGACAACCTTCTTCACAAAGTGAACTTGCATTCTGCTTCCACACTTTCAAATTCTGCATTGTTATCTTCTTC CAGTCCTGCATCTGCTTTGTCTGTTTCTGTTTTTTCTTCAAATAAATGTGCTCAGGCTGACATAGATTCTAGACTCTGGC ATTCTCGGTTAGGACATGCTTCACAGAAGATTGTAAGCCATGTACTCAAGCAATGTAATCCTTCTTTGTCATTGAATAAA ATCAGTGTTGTTTGTGAATCATGTTGCTTGGCAAAGTCTCATCAACTACCTTTTTATTCTTCTCTTTCTGTTTACCGTAA GCCTCTTGAATTGGTTTATTCTGATATTTGGGGGCCTTCCCCAATGCCTTCTAGGACTGGTGAGAGATATTATATAGTCT TTGTGGATGCATTTTCTAG
CDS sequence (LotjaGi2g1v0179300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCCTGCATATGGAGAGGTTCAAAGACAACAAGGACAAGTTGCAAAAATGGAGGATAGCTCTACAAAGAGTGGCTAA CTTCTCGGGTTGGCATTTCAAGCATGGAGATGCATATGAACACGAGTTTATCGGAAAGATTGTTAATGAAGTCTCAAGAA AGATTAATCGTGTTGCTTTACCTATTGCTGATTACCCGATTGGACTAGAGTCACAAGTGCGACATGTAGTTTCGCTTTTG GATGTTGGGTCTATTGATAGAGTTCACATGGTAGGGATCCATGGAATAGGTGGAATTGGTAAAACAACACTTGCTCTAGC AGTTTACAATTCCATTGCTGACCATTTTGAAGGTTTATGTTTTTTGGAGAATGTTAGAGAAAATTCAAACAAACATGGGT TACTACATATCCAAAAGACCCTTCTTTTGGCTGTCCTTGGAGGGAAGGAAATTGAGATAACAAGTGTCAAGCATGGAAGT TCAATAATACAACATCGGCTCCAACAAAAAATGGTTCTTCTGATTCTAGATGATGTTGACAAGGAGGAGCAATTAAATCA TGTTATTGGAAGACCTAATTGGCTTGGTCCTGGTAGTAGAGTCATCATCACGACTCGAAACCAACAATTGCTAGCATGCC ATGGGGTTGAAAGAACATTCAAAGTGAAAGAGTTGAAGAAGGAACATGCTACCGAATTGTTCAAGTGGAAAGCTTTTAAA AACCAGGAAGTTAATTCAAGTTATGAGGACTTACTGAACCAAGCATTGAGTTACACTTCCGGCCTTCCATTAGCTTTGGA AGTAATAAGTTCTAACTTGTTTGGTAAAACAAGGGAAGAATGGGAATCGACATTAGAACAATATAGAAGGATTCCACCTA GAGACATCCAAAAGATACTTGAAGTGAGCTTTGATTCTTTGGAGGAAGAAGAGAAGAATGTTTTCCTAGACATTGCTTGT TGCTTCAAAGGATATAAGTTGGAAGAGTTCAAGGACATACTTTCTGCTCATTATGGTTTCTCCATAGCAAATCACATTAG AGTGTTGGTTCAAAAGTCTCTCATAAAGAATACTAGTTTGACTGAAAAAGTGACACTACATGACTTAATTGAGGATATGG GTAAAGAAATTGTGCAACAAGAATCACCAAAAGAACCTGGAAACCGCAGTAGGCTATGGTCTCTTGAAGATATATTTGAA GTTTTGGAAGAAAATACGGGAACTAGCAAAATTGAAATGATACATCTAGATTTCCCGTCATCTGAAGACGTGGATTGGGA TGGAGAGGCTTTCAAGAAGATGAAAAAACTCAAAACACTTATTATTAGAAAAAATCATTTTTCTAAAGGTCCAGAGCATC TTCCAAATAGTTTAAGAGTATTAGAGTGGTGGAAATATCCTTCACAACGTTTACCAAGTGACTTTTATCCAAAGAAACTC TCCATATGCAAATTACTTGAGAGTAGCTTGGTGTCCTTTGAGTTGCTAAGATCATCAAAGAAGTTCGTGACTATGAAAGT TTTAAATCTCAATCGGTGTGCATCATTAACACATATACCTAACCTATCTGGTCTCCCAAATTTAGAAGAGTTTTCATTTG CACATTGTTCAAAATTAATTACTATTGACTGTTCCGTTGGGTTGTTGGACAAGCTTAAAATCTTGGATGCTGATTATTGC TCCCAGCTTAGGAGTTTTCCTCCCCTTAAGCTGCCCTCTCTTAAAGAACTCAAGCTTAGATGTTGTTCAAGTCTTGAGAG TTTTCCAGAAATATTGGAACAGATGAAAAATATATACGAACTTGATTTGGGTTGCACTAACATAAGCAAATTTCCACATT CAGTTGAAAATCTTACTCGACTTGATGCAATGACAGTTTATCACTTGCTTCCATCAAGGAGCTTAGTCACGATGCCACAA CTAGTATGGCTCAAAATCAGGCAGCAGTGGATATTAGAAGAGGAGGACGAGAGTGAGAGTGAAGAAGAAGTGATGGATGG TGGAGCTATGGCATTAGTTCCCACGTTGTTTCCTAACTTGAATGAAAGAGAGAGTTCCATTCTTTTGCCTTCAAAAGTAG AATATCTTACTCTCGAAAAGTGCGACCTGTCAGATGAATATTTAGTATCAGTTCCCTCGTTGTTTCCTAACTTGAAAGAG TTATGCCTAAAGCATTGTTCACTCACAACTGTACCTGAATGCATCAAAGAATGTCGCTTTTTATGGAGGCTTACCTTGGC TTATTGCGAGCAACTAAGAGAGATTTTTGAAGGGATTTTGCCAAGATTAACCTACTTATCTGTAAAAAAATGTCCATCCT TGAGTTCCAGTTGTAGAAGCATGTTGATGAGGCAGGAACTGCATGAGGCTGTAGACATTCGTCTTCATTTGCAAAACTTA GAAGGAGAAACGATTCCAGAGTGGTTTGAGTACCAGAACAAGGGTCGATCTCAGTCAGTTTCTTTCTGGTTTCGTAACAA CTTCCCTTGCATCTTACTATGTATGCCTTCGCCAAATGTGCCTGGTCATAATTATTTATTTGTAGATTCCTTCATCAATG GCTATTCATGTGACCGTTTCCGAGTAGATTGGGGTCATACGTGTCTTAGTAGGCTACGCCTAACAGACAAGGATAAATAT ATAGTTATAGAAAATGGGTGGAACCATGTGGAGGTTATGACTGACAGTGGCTTAGATTGTGGAATTGGAATCCATGTATG GAAAGAGCAAAACACGAAGGATATCCGATTCACGAATCCTTTAGACTTGAACTTGGCACCACTTGAAGAGGATGATGTTA ATACTGAGTTGACTCGTTTATAG
Protein sequence (LotjaGi2g1v0179300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLHMERFKDNKDKLQKWRIALQRVANFSGWHFKHGDAYEHEFIGKIVNEVSRKINRVALPIADYPIGLESQVRHVVSLL DVGSIDRVHMVGIHGIGGIGKTTLALAVYNSIADHFEGLCFLENVRENSNKHGLLHIQKTLLLAVLGGKEIEITSVKHGS SIIQHRLQQKMVLLILDDVDKEEQLNHVIGRPNWLGPGSRVIITTRNQQLLACHGVERTFKVKELKKEHATELFKWKAFK NQEVNSSYEDLLNQALSYTSGLPLALEVISSNLFGKTREEWESTLEQYRRIPPRDIQKILEVSFDSLEEEEKNVFLDIAC CFKGYKLEEFKDILSAHYGFSIANHIRVLVQKSLIKNTSLTEKVTLHDLIEDMGKEIVQQESPKEPGNRSRLWSLEDIFE VLEENTGTSKIEMIHLDFPSSEDVDWDGEAFKKMKKLKTLIIRKNHFSKGPEHLPNSLRVLEWWKYPSQRLPSDFYPKKL SICKLLESSLVSFELLRSSKKFVTMKVLNLNRCASLTHIPNLSGLPNLEEFSFAHCSKLITIDCSVGLLDKLKILDADYC SQLRSFPPLKLPSLKELKLRCCSSLESFPEILEQMKNIYELDLGCTNISKFPHSVENLTRLDAMTVYHLLPSRSLVTMPQ LVWLKIRQQWILEEEDESESEEEVMDGGAMALVPTLFPNLNERESSILLPSKVEYLTLEKCDLSDEYLVSVPSLFPNLKE LCLKHCSLTTVPECIKECRFLWRLTLAYCEQLREIFEGILPRLTYLSVKKCPSLSSSCRSMLMRQELHEAVDIRLHLQNL EGETIPEWFEYQNKGRSQSVSFWFRNNFPCILLCMPSPNVPGHNYLFVDSFINGYSCDRFRVDWGHTCLSRLRLTDKDKY IVIENGWNHVEVMTDSGLDCGIGIHVWKEQNTKDIRFTNPLDLNLAPLEEDDVNTELTRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 60 | 60 | 7.6E-10 | ||
| PANTHER | 4 | 903 | 900 | 7.8E-284 | – | |
| PANTHER | 4 | 903 | 900 | 7.8E-284 | – | |
| SUPERFAMILY | 57 | 318 | 262 | 9.82E-63 | ||
| Gene3D | 61 | 222 | 162 | 8.7E-31 | – | |
| Pfam | 71 | 303 | 233 | 3.3E-29 | ||
| PRINTS | 90 | 105 | 16 | 4.6E-21 | – | |
| PRINTS | 166 | 180 | 15 | 4.6E-21 | – | |
| PRINTS | 259 | 273 | 15 | 4.6E-21 | – | |
| SUPERFAMILY | 366 | 782 | 417 | 4.42E-33 | – | |
| Gene3D | 412 | 569 | 158 | 7.0E-17 | ||
| PRINTS | 569 | 585 | 17 | 4.6E-21 | – | |
| Gene3D | 570 | 654 | 85 | 4.6E-9 | ||
| Gene3D | 672 | 810 | 139 | 3.9E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0179300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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