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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0184400 |
| Transcript ID | LotjaGi2g1v0184400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine zipper protein; TAIR: AT1G73360.1 homeodomain GLABROUS 11; Swiss-Prot: sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11; TrEMBL-Plants: tr|I1L3Y5|I1L3Y5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0184400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60912314..60916610) extracted from Lotus japonicus Gifu genome v1.2.
GTCCTCTCAGAAAGCCCAATGCTTTAAAAGCCCCTCCATCAGTTACGCTTTCCTTCCAAACCCATCACTCAATACACACA ATATATATTTACTTGTATATATATATTACAATCATTCATTTGTGTGTTCTTTTTCTTTCATTCATTCATAGAGTGCGGCG AGGGTGGTGTTGGTGGTAGTGTTGGTTCTGTGACTTGGTGAGTGACTGGTATTTTTTTTTTCATTTTTGTTCTCTGTTTG TTGATTGATTGAATCATCTTCCATTGATCCCCACAAGATTTTCCATAACTCACTCTCTCTCACTCTCACAAATCATGCAA ATATCTTTGATTATTCATGGCCGTTTCAGAATATTCAATTAATAATTTTGATTTATGTGATTCATTATTGTGATTGTTGT TGCTGCTTAATGAGTATATATGTGTGTGTGTGACACCATTAGTCTCATTTGCTTTGTTCATTCATTCATATCCAACCAAA TCACATTCATTCATTCCTGCTGCACCAAAAGTTTTTATCTTTTTTCACTTTTCTATCACTCCACCGTCCAAAGTCTCTGT CTTTTTTGTTTTTCGATTTTGTATATGGTTTTTCTGTCATGGGAGTAGCTGATTTCATTGTACATAACCAGAAGGTGATC AACTGAGACTAATGGAGTACGCAAGCGGAGGAAGTGGGTCCCCTGGTGACTACCATGATGGTGGTTCTGATTCCCAGAGG AGAAAGAAGCGCTATCACCGTCACACTGCTAATCAGATTCAGAGGCTTGAATCGTAAGGGTTAATTTTATTTGAATGTTT TGGTTTTGGTTTTTGTTTTTTCCAACTTTTTATGAACAGTGAAAAAGTTTTGTTTTTGCACCAATTTCTGATGACCCTTT TGAATGTTGGTTGTGTTGGTTTCAGGCTGTTCAAGGATTGTCCTCATCCAGATGAGAAGCAGAGGCTGCAGTTGAGCAGG GAACTAGGCTTGGCCCCTAGGCAGATCAAGTTTTGGTTCCAGAACAGGAGGACCCAGATGAAGGTACTTTTGTTTTCCTC TAATGGTTTTGTTGTTCTTTTGTTTTGTTGTTGTGTCTCTCCTTGTTGTTTCATGTTTGTTGGTTTGTTTTGGTTAAATA AAAACAATCTCAGGCCCAGCACGAAAGGGCGGATAACTGCGCGCTCCGGGCTGAGAATGACAAGATTCGCTGTGAGAACA TTGCAATCAGGGAAGCGCTGAAAAATGTCATCTGCCCCAATTGTGGTGGTCCTCCTCACAATGATGATTCCTACTTTGAT GAGCAAAAGCTGAGGTTGGAGAATGCTCATCTCAAGGAAGAGGTAATTAATTTAATCCAATTAACCTTTCTCATTTGTTT TTTTTTTTCATGTTTTGGGTTTATGAATATTGAATTATTTACAGAATAGTACCTTTTTTTTGTTGGTCATTGGTTTTTGC AATTTGTATTTTGCAGCTTGACAGAATGTCAAGCATTGCTGCTAAGTACATTGGGCGGCCAATCTCTCAGCTGCCACCAG TTCAGCCTCTTCATATGTCATCTCTGGATTTGTCAATGGGGAGTTATGGTGGGCATGGTTTGGCTGGTGTTGGTGCACCT TCCCTTGATCTTGATCTTCTCCCTGGGAGTTCATCAACCATGGCAAACATGCCTTACCAGCCTGCTGGTTTCTCTGAGAT GGAGAAGTCTCTCATGTCGGACATTGCTTCAAGCGCCATGGAAGAAATGATGAGGCTCCTGCAGACTAATGACCCACTGT GGATCAAGTCAAGCGCTGCCGCTGATGGCAAAGATGTGCTCAACTATGATGCCTATGACAGAATGTTCCCCAAGAACAGC AGCCGTTTGAAGAACCCCAATGTTCGTGTTGAAGCTTCTAGGGATTCTGGAGTTGTGATCATGAATGGCTTGACTTTGGT TGACATGTTTATGGATCCGGTACAATGTCTTTTGTTTTTTTGTTCTTGAATGAAAACAATTGAAACTCTCAACTGAATTT TGCAACTATAATGAATTGTGATTTTGCAGAACAAGTGGATGGAGATATTTCCCACCATTGTGACAGTGGCAAGGACTATG GAAGTTATATCTCCTGGAATGATGGGTACTCATAGTGGCTCTTTGCAATTGGTATGTTGGAAATTTGTTCTATTCATTTT TCTTTTAATTTTCATGCTGTTTTCCTCCACTTTGACCTTGTTTTTTTCTTCATGCAAATTTTTTGTTCCTTCTAGATGTA TGAAGAGTCGCAAGTGCTTTCTCCACTTGTTCCTACTAGAGAGTTCTACTTCCTGCGTTACTGTCAGCAAATTGAGCAAG GCTTGTGGGCAATAGTGAATGTTTCATATGATTTTCCTCATGATAACCAATTCACACCTCAATTCCGCTCTCATCGCCTT CCTTCTGGTTGCTTCATCCAAGACATGCCTAATGGCTATTCCAAGGTAATTAATTGACCTTAAAACTATGTATATGCTAC TTTAATTGCGGCTACTTCAATTGCGGCTACTTCGATTCCATCATTTACATTTTTGTTTACTCTTCTATGTAGGTTACTTG GCTAGAGCATGTGGAGATTGAAGACAAAACTCCAGTTAACAGGCTTTATAGGAATGTTATCTATAGTGGGCTTGCATTTG GAGCTCAAAGGTGGCTCACTACTCTTCAGAGGATGTGTGAAAGGCTTGCTTGTCTAATGGTGTCTGGAAATTTTACCCGT GATCTGGGAGGAGGTACATTCATATCATGTTATTATTGTGCAATCTCTGTGATGTTTAATTTTGTTGCATTGATCTGAAA CTAGTTATTATCATTGAATTTCAGTGATTCCATCTCCTGAGGGGAAGAGGAGCATGATGAAACTTGCACAAAGGATGGTG ACCAATTTCTGTGCAAGTGTTAGCGCATCGGCAAGCCACCAATGGACCACACTCTCTGGACTGAATGAGATTGGAGTCAG AGTCACTGTGAGGAAGAGCACAGACCCTGGCCAGCCTAATGGGGTTGTGCTTAGTGCTGCCACTACCATTTGGCTCCCAG TTCCCCCACAAACTGTGTTCAACTTCTTCAAGGATGAAAGGAAAAGATCTCAGGTAATGCCATTGTTCATTAATTTAGAG AATTAGGGCTTGTTTGATTCCCTTCTAAATTTTTTCAATTTATATGAATTTCAATTTTTAATCAAGCATGCCCTTAACTT ATCTGATGTAATTTTTTGACAATGTGTTATGTTTTGCTTTAGTGGGATGTTCTCTCTAATGGTAATGCTGTCCAAGAGGT TGCTCACATAGCAAATGGTTCCCATCCTGGCAACTGCATATCTGTGCTTAGGGTAAGACATGCTTAGTCCTAATTAAAGT TTTGTTTTTCCACTTTGTTTCCCATTAATTGCAATCTATATTCATTTATTTTTTCCATTTCCACAGGCTTTCAACACAAG TCAGAACAACATGCTGATCCTGCAAGAGAGCTGTGTGGACTCCTCAGGCTCCATTGTGGTGTTCTGTCCAGTTGATCTGC CAGCTATCAACATCGCGATGAGCGGCGAGGACCCTTCCTACATTCCATTACTACCATCAGGGTTCACAATTACACCTGAT GGAAACACTGATCAAGGAGGTGGAGGAGGAGATGGAGCATCAACCAGCTCAAACACCAACACCAGGTCTGGTGGAGGATC GCTGATCACCGTCGCGTTTCAGATTCTGGTGAGCAGCCTGCCATCTTCGAAGCTGAACATGGATTCGGTGGCGACGGTTA ACAGCCTCATTGGTGACACTGTCCAGCACATTAAGGCTGCTTTGAATTGTCCTAGTTCCTGATGAGAAAGAAAAAACTTA GTTTTAACTCTTCCTTAAATATTTTGATCAGAAAATGGTTCAGACTTCAGAGTACCTGAGTTTATTTTGTGCTGGTGGTG GTAATCAATGTTGAGAAGAAGTTGAAGTGTTTTGGGTTAGTTGGGACTTCAATGCCCTCTCATCAAGAGCACAAGCTGAA GTTATTTACTCCTCTCTGCTGCTGCTGGTAGACCTGTATTTTGCTTCAAAGGTTTTCATTAAGTTTCATTACATTTCATA CCAACTACCAAAAATTTTAAATTTCATTACATTTATTTTGGGGATTGTTATTTTGCTTGCACTTTTGAGATATTTGTTGT TTGTCCTAGTAGAGGGAGTCAAGAGCGAACCATGCTTGGTCTTTTTCTCCTTCACAGATCAGATGAATATGTGGTTCGGG CATTGACTTCCTGTGCAGACTTGTTATTCATGAATTTATTGTTCATCGTTTTTGTTA
CDS sequence (LotjaGi2g1v0184400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTACGCAAGCGGAGGAAGTGGGTCCCCTGGTGACTACCATGATGGTGGTTCTGATTCCCAGAGGAGAAAGAAGCG CTATCACCGTCACACTGCTAATCAGATTCAGAGGCTTGAATCGCTGTTCAAGGATTGTCCTCATCCAGATGAGAAGCAGA GGCTGCAGTTGAGCAGGGAACTAGGCTTGGCCCCTAGGCAGATCAAGTTTTGGTTCCAGAACAGGAGGACCCAGATGAAG GCCCAGCACGAAAGGGCGGATAACTGCGCGCTCCGGGCTGAGAATGACAAGATTCGCTGTGAGAACATTGCAATCAGGGA AGCGCTGAAAAATGTCATCTGCCCCAATTGTGGTGGTCCTCCTCACAATGATGATTCCTACTTTGATGAGCAAAAGCTGA GGTTGGAGAATGCTCATCTCAAGGAAGAGCTTGACAGAATGTCAAGCATTGCTGCTAAGTACATTGGGCGGCCAATCTCT CAGCTGCCACCAGTTCAGCCTCTTCATATGTCATCTCTGGATTTGTCAATGGGGAGTTATGGTGGGCATGGTTTGGCTGG TGTTGGTGCACCTTCCCTTGATCTTGATCTTCTCCCTGGGAGTTCATCAACCATGGCAAACATGCCTTACCAGCCTGCTG GTTTCTCTGAGATGGAGAAGTCTCTCATGTCGGACATTGCTTCAAGCGCCATGGAAGAAATGATGAGGCTCCTGCAGACT AATGACCCACTGTGGATCAAGTCAAGCGCTGCCGCTGATGGCAAAGATGTGCTCAACTATGATGCCTATGACAGAATGTT CCCCAAGAACAGCAGCCGTTTGAAGAACCCCAATGTTCGTGTTGAAGCTTCTAGGGATTCTGGAGTTGTGATCATGAATG GCTTGACTTTGGTTGACATGTTTATGGATCCGAACAAGTGGATGGAGATATTTCCCACCATTGTGACAGTGGCAAGGACT ATGGAAGTTATATCTCCTGGAATGATGGGTACTCATAGTGGCTCTTTGCAATTGATGTATGAAGAGTCGCAAGTGCTTTC TCCACTTGTTCCTACTAGAGAGTTCTACTTCCTGCGTTACTGTCAGCAAATTGAGCAAGGCTTGTGGGCAATAGTGAATG TTTCATATGATTTTCCTCATGATAACCAATTCACACCTCAATTCCGCTCTCATCGCCTTCCTTCTGGTTGCTTCATCCAA GACATGCCTAATGGCTATTCCAAGGTTACTTGGCTAGAGCATGTGGAGATTGAAGACAAAACTCCAGTTAACAGGCTTTA TAGGAATGTTATCTATAGTGGGCTTGCATTTGGAGCTCAAAGGTGGCTCACTACTCTTCAGAGGATGTGTGAAAGGCTTG CTTGTCTAATGGTGTCTGGAAATTTTACCCGTGATCTGGGAGGAGTGATTCCATCTCCTGAGGGGAAGAGGAGCATGATG AAACTTGCACAAAGGATGGTGACCAATTTCTGTGCAAGTGTTAGCGCATCGGCAAGCCACCAATGGACCACACTCTCTGG ACTGAATGAGATTGGAGTCAGAGTCACTGTGAGGAAGAGCACAGACCCTGGCCAGCCTAATGGGGTTGTGCTTAGTGCTG CCACTACCATTTGGCTCCCAGTTCCCCCACAAACTGTGTTCAACTTCTTCAAGGATGAAAGGAAAAGATCTCAGTGGGAT GTTCTCTCTAATGGTAATGCTGTCCAAGAGGTTGCTCACATAGCAAATGGTTCCCATCCTGGCAACTGCATATCTGTGCT TAGGGCTTTCAACACAAGTCAGAACAACATGCTGATCCTGCAAGAGAGCTGTGTGGACTCCTCAGGCTCCATTGTGGTGT TCTGTCCAGTTGATCTGCCAGCTATCAACATCGCGATGAGCGGCGAGGACCCTTCCTACATTCCATTACTACCATCAGGG TTCACAATTACACCTGATGGAAACACTGATCAAGGAGGTGGAGGAGGAGATGGAGCATCAACCAGCTCAAACACCAACAC CAGGTCTGGTGGAGGATCGCTGATCACCGTCGCGTTTCAGATTCTGGTGAGCAGCCTGCCATCTTCGAAGCTGAACATGG ATTCGGTGGCGACGGTTAACAGCCTCATTGGTGACACTGTCCAGCACATTAAGGCTGCTTTGAATTGTCCTAGTTCCTGA
Protein sequence (LotjaGi2g1v0184400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEYASGGSGSPGDYHDGGSDSQRRKKRYHRHTANQIQRLESLFKDCPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK AQHERADNCALRAENDKIRCENIAIREALKNVICPNCGGPPHNDDSYFDEQKLRLENAHLKEELDRMSSIAAKYIGRPIS QLPPVQPLHMSSLDLSMGSYGGHGLAGVGAPSLDLDLLPGSSSTMANMPYQPAGFSEMEKSLMSDIASSAMEEMMRLLQT NDPLWIKSSAAADGKDVLNYDAYDRMFPKNSSRLKNPNVRVEASRDSGVVIMNGLTLVDMFMDPNKWMEIFPTIVTVART MEVISPGMMGTHSGSLQLMYEESQVLSPLVPTREFYFLRYCQQIEQGLWAIVNVSYDFPHDNQFTPQFRSHRLPSGCFIQ DMPNGYSKVTWLEHVEIEDKTPVNRLYRNVIYSGLAFGAQRWLTTLQRMCERLACLMVSGNFTRDLGGVIPSPEGKRSMM KLAQRMVTNFCASVSASASHQWTTLSGLNEIGVRVTVRKSTDPGQPNGVVLSAATTIWLPVPPQTVFNFFKDERKRSQWD VLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCVDSSGSIVVFCPVDLPAINIAMSGEDPSYIPLLPSG FTITPDGNTDQGGGGGDGASTSSNTNTRSGGGSLITVAFQILVSSLPSSKLNMDSVATVNSLIGDTVQHIKAALNCPSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | - | – | |
| Gene3D | 6 | 81 | 76 | 3.5E-20 | – | |
| SUPERFAMILY | 6 | 82 | 77 | 3.76E-20 | ||
| PANTHER | 14 | 718 | 705 | 0.0 | ||
| PANTHER | 14 | 718 | 705 | 0.0 | – | |
| ProSiteProfiles | 22 | 82 | 61 | 17.88 | ||
| SMART | 23 | 86 | 64 | 1.2E-18 | ||
| CDD | 24 | 83 | 60 | 2.29949E-19 | ||
| Pfam | 25 | 80 | 56 | 1.6E-17 | ||
| ProSitePatterns | 57 | 80 | 24 | - | ||
| Coils | 130 | 150 | 21 | - | – | |
| ProSiteProfiles | 216 | 455 | 240 | 51.949 | ||
| SUPERFAMILY | 217 | 453 | 237 | 9.82E-37 | – | |
| CDD | 220 | 451 | 232 | 1.42046E-115 | – | |
| SMART | 225 | 452 | 228 | 7.8E-43 | ||
| Pfam | 226 | 452 | 227 | 1.7E-47 | ||
| Gene3D | 297 | 444 | 148 | 2.2E-6 | ||
| SUPERFAMILY | 473 | 711 | 239 | 1.47E-26 | – | |
| MobiDBLite | 644 | 667 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi2g1v0184400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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