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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0190400 |
| Transcript ID | LotjaGi2g1v0190400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|A0A0R0LGT6|A0A0R0LGT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0190400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62080272..62085955) extracted from Lotus japonicus Gifu genome v1.2.
CTAAATTATGATTTAAAAAAAGCTGCAACAACCGGCATGACGTCTAAGATTCCAACAAAACTTAAAAGGTCTAATCTTCT TTCTTTTACTGGCCTTCAATTTCACAATTTCATCTAGTCAGGGTACCGTACCCAAAAAAATTTCAAGCTACCACAGAATT TGCCTTATTTATTATTATTATTATGAAATTCACCATTGACTCAAGTGAAGTCTCCCCGCAAGAAGAAGCAGAGTGTATTT AAGTTTCATCATTATTGTTTCACTTTACACACAATCTTAATTCTTAATTGACCTCTACTTTGCAAACCATCAATCATCTA TGATGAAAATTAAGCCAGATTCATTAGTTTTGGTGATCATGCAATTATTATATTGGCTTTGCCTTTGTAATCACGTATTT GTGATTTCTGGTCTTTGTCTTGATGATCAGAAGTCTTCACTTCTCCAATTCAAGAACAACCTCTTATTCACGTCCGAAAG TAGCACCAAGCTGAAGTCATGGGATCCAAGTGATGATTGTTGTACATGGATGGGAGTAACATGTGACAAGAAGGGACATG TTTCTGGTCTTGATCTCAGTGAAGAATCAATCTGCGGTGGATTAGACAATTCAAGTCTTTTCAATCTCCAACATCTCATG AAGCTGAATTTGGCTTATAATCCTTTCGGTTCTTTCAATGTCCCTTTGGCGCCTCTAACTGGAACAAGAAACAGACCAGT GCTCAGTGGGTGTGATCACGGCAGATACATATATTCTAGGCTATATTCTAACATCCGGATTCAACAAGTTGAAGAATTTA GCTTACCTGAATTTGTCACATGCTGGTTTTAGGGGGCAGATTCCATCAGATATTTCTCAACTAACAAGGTTGGTTACTCT TGATTTATCTAATAATCATCTAGATACCCAAAATTTTCGAAAGCTTGTCCAAAACCTCACCAGTATAAGGCAATTGTATT TGGATGGTTTGCAACTAAGAGATGATCAAGGACAAGAATGGCGCAATGCTTTGTTGCCGCTGCGTGACCTCCAAGAACTT AGCATGGCAAATTGCAATCTCAGAGGACCCTTTGATGCTTCTTTGACAGGATTTGAGAATCTATCCATCATTATTCTTGA TAAAAACAACTTTTCATCCCCTGTGCCAGAGACATTTGCCAATTTTAAGAATCTCACTACCCTCAGTCTTAGCCGTTGCA ACTTGAATGGAATATTTCCACCGAAGATCTTCCAGATTGAAACATTGTCATTTATCGACATATCATGGAATGACAATCTC GATGGTTTCTTTCCAGACTTCCCACTGGGTGGATCTCTCCGTACCATAAGAGTGAGTCTCACAGACTTCTCTGGAACTCT CCCACACTCTATTGGTAACCTGAGGCACTTATCTGAATTGGATCTTATTGGTTGTCGATTTAATGAAACACTTCCCAATT CACTGTCAAACCTCACTGAACTCACTCACCTGTATTTGTCATATAACAACTTCACAGGTCCATTGCCATCATTTGGTATG ACCGAAAAACTAACCCACCTCGACCTTTCTCATAATAGCTTAAGCGGTGCAATTCCTTCATCTCTTTTTAGGCTTCCATT ACTAGAGGAGATTGATCTTGACGACAACCAGTTTAGTCAGCTTGATGAATTCGTAAATGTGTCTTCCTCTGCATTGACCC TCCTTGACTTGAGTCATAATTCTATTAGTGGGAGCATTCCATCATCTCTTTTTACGCTCCCATTACTAGAGAAGATTTAT CTTCGAGACAACCAGTTTAGTCAGTCTCATGAATTCACAAATGGGTCTGCCTCTGTATTGAACTACCTTGATTTAAGCAA CAATGATCTATCAGGGAATTTTCCAGAGTTTATCTTTCAGCTCAGTGCACTTTCAGCCCTTTACCTTTCCTCTAACAAGT TCCATGGACCATTGCAGCTAAATAGTTGTTTACCGCTTAGAAATTTATCTCATCTGGACATTTCATACAACAGCTGGTCA GTCAATGCGAATATGGCCTCTCCTTTTCCCAACCTTAGAAATCTATATATGGCATCTTGCAACTTGAAAACCTTCCCTAA TTTCTTGAGAAATCAATCCACATTAAGATCTTTACACCTTTCAAGGAACCACATTCAAGGAATAGTGCCCAACTGGCTTT GGAAATTAAAAGATCTTGAAGAACTTGATATTTCAAGCAATTTGTTGACTGATTTGGAAGTGAAAAATGTTTCTTCCTTG ATAAAACTTGACGTTCATGACAACCAACTACAAGGGCAAGTACCTATTTTTCTTGTAAATGCTTCCTATTTGGATTATTC CAGGAACAAGTTTAGCTCTGTTATCCCACAAGATATCGGTAAATACCTGTCTTCGGCAGTGTTCCTCTCTCTTTCAGACA ATAAATTCCATGGCAACATCCCAGATTCCCTCTGCAATGCTACACATCTTGAAGTGCTTGATCTTTCAATCAACAACTTT TCTGGAACAATTCCCTCTTGTTTAATGACAATGACTAAGACCCTTGAGGTATTGAGTTTGAAGGACAACAACCTCAAAGG AGCTATCCCAGATATGTTTCCAGCTTCTTCTGCTCTAAGCACTCTGAATCTCCATGGAAATCACTTGCATGGGCCAATTC CAAAATCTCTTGCCCACTGTTCCAAATTAGAGGTACTGGACCTTGGAAAAAATCATATTGCTGGTGGCTTTCCATGCTTT TTGCAAAACATATCCACAATTCGGGTACTGGTTTTGCGCAACAACGAATTTCAAGGTTCCCTAGGATGTGGACAAGCCAA TAATAAGCCTTGGAAAATGCTTCAAATTGTCGACATCGCTTTTAACAACTTTAGTAGCAAACTAAAGGGACAATATTTCA CAAACTGGGAAACAATGATGCATAATGAAGATCAATCAGAGGGATTTATAGGAGAAGGATCATATTATCAGGATAGCGTG ACAGTGATCAACAAAGGTCAAGAGATGGTGTTGGTTAAAATTCTTACTATCTTCACATCCATTGATTTCTCATCTAACCA TTTTGAAGGACCAATACCTGAGGAGCTTATGGATTTTAAAGCACTCCATGTTCTCAACCTTTCAAACAATGCTCTCTCTG GTGAGATCCCATCATCCATAGGGAACCTGAAACAGTTGGAGTCCTTGGACCTCTCACAGAACTCATTTCATGGAGAAATT CCTGTGCAGTTTGCAAGTCTGACATTCCTTTCTTATCTGAACCTCTCCTTCAATCATTTGGAGGGGAAGATCCCAACAGG TACCCAACTCGGCCAGCATCCTGCCTGCTAGGTAGCGTTCAAAACGGGGCGCTGTCTGCTACGCTATAAGGAAATAACGT TGCGCCCTCACTAACACCAATTGGTTTTGGCGTAGTGGTAAGCGCGTGATCACCTCTTTTTCGCTCCACACCTCTTCTGG TATTTTATGCTCCAATGGTATCGATGGACCTCGGTTGATCATATATGATATCTACTATAACTTGAAGAGACATTCTTCTT GGTTTAAATAAAATAATTTCATAGGGAGTGGTGGTGTTCAGTGTTTTATTCAAAATATAAAGAGATGAGCTGATCATAAA ATCAGACCATTTCAATGTCATAGGGAGTGTTAGTGTTCAATGTTTCAGTGTTTCATGCAGCCATATCCATCAGTAAAACT TTTTCATGAGAGATATAGTGATGCAATCCATGAAATCAAATTAAACATATAGGTTTGCTAATAAGTTATCAGATGTACAG GAAGATGACAAATAAGCACATTAATAGGATACCAACAAGTCAAACATGAAGAAAACAGAGTTAAAGAGAATAATATATTC ACTACATTGTCATACAACTAAATCCTTCTTATTTCCGCTGAACCAGGTGTTTGCTCAAATGCTTGATTCGTATCGTTATT AGTATTATGCTGTGATGGTATAATTAGATCATAATGGCTGGATCTTGAAACTTGTATTTGTGTGAGATTGCTTCTTGTTT TGGACCTGCTTGACAATATGAGAAGAGTTTGTGACTTGAATAAGCTATCTAAAGTATGATTTTCTGTATGGGCTATCAAC TAAGCTAGTTCTAATGTGGATGCTGGTTGGATTTGACTCACTTTTAATTCTTTGGTCTGATAGACAATATGCATGTTGCG GAATTGGAGGTCGGTACAATTACAATGCATCAGCAGATTGTGGAGAAGCTGGAGTGATTGCTTATGATGATCCTTCTGAG TTTATTGGGTGGGATAATGTTCATTTGACAGAGGCAGCATGTAGAGATTAAAAATTTGAAAGTGTGTGTGATTGATTGTA TGAGATAGAGACAGAAAGTGGGAAACAAAGGGAGAAGACACCATTTGTGTTGGGCATTGTTAGAAATAATGTGACTTCAA TTAGGCGCATTGCTGATTTAGGGACTAATTGTTACTTTAAATAAGGACTCATTCATTTCTTTCAAGAGATCCTGAATTGA CTTTATAAGCACATGCTATTTTCCTTCACTTCTTTTAAAAATCACATCAAAATTTGCATAGAAAAGTAGCTTTTATCTCT AAACTTTTCTTTTATTTATTCTTTCTAAGCTAAAACTTCCATGATGTGTCATTTTAAAGTGAAAATTGCATAGACTATAA ACGGTCCAAGCCGTCAGTAATCTGGCGGGTAAATACCGTGCACGATCACTAACAGCTTATTTTATTTTTTGAATGAATTG TTTAGGAGGGTAAGTTCCGTTGGTAATCTGTAAGAACCTGTTGAAAAGTCGTCGGTAAATACAGACAGTATAGACCGTTG GTAAACTATATATAGACTCTCTGTCCTCTTGACTCTTACTGAATCCTTATTTTTTAGCGTTTTCATTCATGTAAGTTCCT CTTTGTTTTATTTGTATATAATTTTGTTTATGATTTGTATATTTTGTATGTTGTTGTAGGTTAGTTTTGAATTGTGGATT AAATTTTTATTTTATTTTTTTGTTATAATATTTGCACATGAGGTTTCTTTGTTTCATTTTTGTTGAGTATTATATTGCAT TTATATTTAATTCGCGTATCATGTTGCTCGATATAATTAATATTTAAAATTAAGCTTTTTTTCACACATTCCTCTAAGAT GTACTGATGCGGAGTAATTAGAGCTACAATATCTCCAAAAGTTGGAGCATCCGAAGAAATCTTGCTGATTGACTTCAGTT TTACGTTTACTTATTTTAATTTCATATCTTAGGGTTATTTTGATTTTTATTAATTTCAAATCTCAGGACTATTTAGGATT TACTACTTAATTAGGATTTAGGATTTGCTATTTAAATTTAGGATTTACTATTTAATTAGAATTTACTATTTAAACAGTTG TTGTTTTCTTTTATGAGACAGTTTGAAGTTTTAGAATTTTTGGAATTAATAGAGAAGTTTTCTCTTTGTCTGTCAACCTT CGGTATTTTCCGGTATTCTCCGTATAAATCAACGAATCTTGACCTTTGAATTCTCGGTATACTGCGGGTATCAACGAGAG TTTGAATTTATCCTTCTTTTCCCAACGCACGCTGCATCATGTACCAACATGAAACATGGATAAATGAGCATTCTACCATC CCTCACGTAAGTTTGAGTATTATTTGACTTAATATCTTTATGTATTATCTTAATTGTAACATATATTATGATGCAGCGTG CGTG
CDS sequence (LotjaGi2g1v0190400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAATTGCAATCTCAGAGGACCCTTTGATGCTTCTTTGACAGGATTTGAGAATCTATCCATCATTATTCTTGATAA AAACAACTTTTCATCCCCTGTGCCAGAGACATTTGCCAATTTTAAGAATCTCACTACCCTCAGTCTTAGCCGTTGCAACT TGAATGGAATATTTCCACCGAAGATCTTCCAGATTGAAACATTGTCATTTATCGACATATCATGGAATGACAATCTCGAT GGTTTCTTTCCAGACTTCCCACTGGGTGGATCTCTCCGTACCATAAGAGTGAGTCTCACAGACTTCTCTGGAACTCTCCC ACACTCTATTGGTAACCTGAGGCACTTATCTGAATTGGATCTTATTGGTTGTCGATTTAATGAAACACTTCCCAATTCAC TGTCAAACCTCACTGAACTCACTCACCTGTATTTGTCATATAACAACTTCACAGGTCCATTGCCATCATTTGGTATGACC GAAAAACTAACCCACCTCGACCTTTCTCATAATAGCTTAAGCGGTGCAATTCCTTCATCTCTTTTTAGGCTTCCATTACT AGAGGAGATTGATCTTGACGACAACCAGTTTAGTCAGCTTGATGAATTCGTAAATGTGTCTTCCTCTGCATTGACCCTCC TTGACTTGAGTCATAATTCTATTAGTGGGAGCATTCCATCATCTCTTTTTACGCTCCCATTACTAGAGAAGATTTATCTT CGAGACAACCAGTTTAGTCAGTCTCATGAATTCACAAATGGGTCTGCCTCTGTATTGAACTACCTTGATTTAAGCAACAA TGATCTATCAGGGAATTTTCCAGAGTTTATCTTTCAGCTCAGTGCACTTTCAGCCCTTTACCTTTCCTCTAACAAGTTCC ATGGACCATTGCAGCTAAATAGTTGTTTACCGCTTAGAAATTTATCTCATCTGGACATTTCATACAACAGCTGGTCAGTC AATGCGAATATGGCCTCTCCTTTTCCCAACCTTAGAAATCTATATATGGCATCTTGCAACTTGAAAACCTTCCCTAATTT CTTGAGAAATCAATCCACATTAAGATCTTTACACCTTTCAAGGAACCACATTCAAGGAATAGTGCCCAACTGGCTTTGGA AATTAAAAGATCTTGAAGAACTTGATATTTCAAGCAATTTGTTGACTGATTTGGAAGTGAAAAATGTTTCTTCCTTGATA AAACTTGACGTTCATGACAACCAACTACAAGGGCAAGTACCTATTTTTCTTGTAAATGCTTCCTATTTGGATTATTCCAG GAACAAGTTTAGCTCTGTTATCCCACAAGATATCGGTAAATACCTGTCTTCGGCAGTGTTCCTCTCTCTTTCAGACAATA AATTCCATGGCAACATCCCAGATTCCCTCTGCAATGCTACACATCTTGAAGTGCTTGATCTTTCAATCAACAACTTTTCT GGAACAATTCCCTCTTGTTTAATGACAATGACTAAGACCCTTGAGGTATTGAGTTTGAAGGACAACAACCTCAAAGGAGC TATCCCAGATATGTTTCCAGCTTCTTCTGCTCTAAGCACTCTGAATCTCCATGGAAATCACTTGCATGGGCCAATTCCAA AATCTCTTGCCCACTGTTCCAAATTAGAGGTACTGGACCTTGGAAAAAATCATATTGCTGGTGGCTTTCCATGCTTTTTG CAAAACATATCCACAATTCGGGTACTGGTTTTGCGCAACAACGAATTTCAAGGTTCCCTAGGATGTGGACAAGCCAATAA TAAGCCTTGGAAAATGCTTCAAATTGTCGACATCGCTTTTAACAACTTTAGTAGCAAACTAAAGGGACAATATTTCACAA ACTGGGAAACAATGATGCATAATGAAGATCAATCAGAGGGATTTATAGGAGAAGGATCATATTATCAGGATAGCGTGACA GTGATCAACAAAGGTCAAGAGATGGTGTTGGTTAAAATTCTTACTATCTTCACATCCATTGATTTCTCATCTAACCATTT TGAAGGACCAATACCTGAGGAGCTTATGGATTTTAAAGCACTCCATGTTCTCAACCTTTCAAACAATGCTCTCTCTGGTG AGATCCCATCATCCATAGGGAACCTGAAACAGTTGGAGTCCTTGGACCTCTCACAGAACTCATTTCATGGAGAAATTCCT GTGCAGTTTGCAAGTCTGACATTCCTTTCTTATCTGAACCTCTCCTTCAATCATTTGGAGGGGAAGATCCCAACAGGTAC CCAACTCGGCCAGCATCCTGCCTGCTAG
Protein sequence (LotjaGi2g1v0190400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANCNLRGPFDASLTGFENLSIIILDKNNFSSPVPETFANFKNLTTLSLSRCNLNGIFPPKIFQIETLSFIDISWNDNLD GFFPDFPLGGSLRTIRVSLTDFSGTLPHSIGNLRHLSELDLIGCRFNETLPNSLSNLTELTHLYLSYNNFTGPLPSFGMT EKLTHLDLSHNSLSGAIPSSLFRLPLLEEIDLDDNQFSQLDEFVNVSSSALTLLDLSHNSISGSIPSSLFTLPLLEKIYL RDNQFSQSHEFTNGSASVLNYLDLSNNDLSGNFPEFIFQLSALSALYLSSNKFHGPLQLNSCLPLRNLSHLDISYNSWSV NANMASPFPNLRNLYMASCNLKTFPNFLRNQSTLRSLHLSRNHIQGIVPNWLWKLKDLEELDISSNLLTDLEVKNVSSLI KLDVHDNQLQGQVPIFLVNASYLDYSRNKFSSVIPQDIGKYLSSAVFLSLSDNKFHGNIPDSLCNATHLEVLDLSINNFS GTIPSCLMTMTKTLEVLSLKDNNLKGAIPDMFPASSALSTLNLHGNHLHGPIPKSLAHCSKLEVLDLGKNHIAGGFPCFL QNISTIRVLVLRNNEFQGSLGCGQANNKPWKMLQIVDIAFNNFSSKLKGQYFTNWETMMHNEDQSEGFIGEGSYYQDSVT VINKGQEMVLVKILTIFTSIDFSSNHFEGPIPEELMDFKALHVLNLSNNALSGEIPSSIGNLKQLESLDLSQNSFHGEIP VQFASLTFLSYLNLSFNHLEGKIPTGTQLGQHPAC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 88 | 88 | 1.4E-15 | ||
| SUPERFAMILY | 3 | 294 | 292 | 4.32E-50 | – | |
| PANTHER | 8 | 78 | 71 | 3.4E-214 | – | |
| PANTHER | 8 | 78 | 71 | 3.4E-214 | – | |
| SMART | 17 | 40 | 24 | 350.0 | ||
| Pfam | 19 | 77 | 59 | 1.8E-6 | ||
| SMART | 41 | 65 | 25 | 270.0 | ||
| Gene3D | 89 | 206 | 118 | 8.4E-32 | ||
| SMART | 113 | 136 | 24 | 350.0 | ||
| SMART | 137 | 159 | 23 | 110.0 | ||
| Pfam | 162 | 181 | 20 | 0.074 | ||
| PRINTS | 163 | 176 | 14 | 9.1E-6 | – | |
| SMART | 184 | 207 | 24 | 16.0 | ||
| Pfam | 187 | 245 | 59 | 6.8E-8 | ||
| Gene3D | 207 | 324 | 118 | 6.5E-22 | ||
| PANTHER | 229 | 749 | 521 | 3.4E-214 | – | |
| PANTHER | 229 | 749 | 521 | 3.4E-214 | – | |
| SMART | 232 | 255 | 24 | 63.0 | ||
| SUPERFAMILY | 258 | 418 | 161 | 1.17E-27 | – | |
| Gene3D | 325 | 417 | 93 | 2.4E-19 | ||
| SMART | 328 | 351 | 24 | 220.0 | ||
| Pfam | 329 | 388 | 60 | 2.5E-8 | ||
| SMART | 354 | 374 | 21 | 140.0 | ||
| SMART | 375 | 399 | 25 | 33.0 | ||
| Gene3D | 418 | 491 | 74 | 1.7E-18 | ||
| SUPERFAMILY | 419 | 748 | 330 | 1.9E-50 | – | |
| Pfam | 493 | 552 | 60 | 9.2E-9 | ||
| SMART | 678 | 701 | 24 | 260.0 | ||
| Pfam | 680 | 739 | 60 | 2.7E-8 | ||
| SMART | 702 | 725 | 24 | 61.0 | ||
| PRINTS | 702 | 715 | 14 | 9.1E-6 | – | |
| SMART | 726 | 750 | 25 | 150.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0190400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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