Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0192000 |
| Transcript ID | LotjaGi2g1v0192000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT5G60960.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9FME4|PP438_ARATH Pentatricopeptide repeat-containing protein PNM1, mitochondrial; TrEMBL-Plants: tr|I1NIQ8|I1NIQ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0192000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62349836..62360813) extracted from Lotus japonicus Gifu genome v1.2.
TACGTAGTTTCATTTGATTTTCTTTCCCCTCATATTCTTTCATTTCATTTTCATACCCACATACAAACAAAGCATAAAGA AATAGGAATTTTATAAATAAGCAATCTCAGCCGTCCATTTGAAACAAACAATGCATATAACTTCACTCCTGGTTCTTCTT CTTCTTCTGGAACCCTAAAAATGCCGCCATTAGCGTCTCTGCAACTCCGGCGGCTCTTGTTCCGATCCTTCCGTTCTTCT TCCATAGCATCCATCTCCTCCTGTCAAATCGAACCCTCACCCTCTCCTCCGTTTCACCACCACCACTCTTCCCATTTCCA ATCCCCAACCCTTCTCACTCCATCTTCACTCTTCAAAACCAGGCATTTCTCATCATCAGAACCCTTCACCCCAACCCAAA CTCTCCCAGAAGATTCGGATCCAGTTGCCACTGCACTCTCCTCGGAGCTTCTCAAAGACTCTGACTCAGACCCTCGCTCC GTCGCGCAACACCTCAACCTGAGCTTCTCTCACGTCACACCAACCCCCGATTTAGTCCTCCAAGTCCTAAACCTCTCCCC TGGAGGCGGAAGAACCGTGTTAGGGTTCCACCAATGGCTCGCTTCGCACCCCAAATTCAACCTCACAGACGACACGCTCG CCCATTTTGTTGACTATTTCGGCCGCCGCAAGGATTTCAAGGCCACGCACGATGTTCTCTACGGCGGCGGTGGAGGGACC AAGACCCTTGTCGCGGCGATCGACCGCCTTGTTCGCGCGGGGCGGCCGAGCCAGGCGGTTCAGTTTTTTGAGAGGATGGA GCGGGATTACGGCTTGAAGCGTGATCGCGGTTCACTGAAGGTGGTTGTGGAGAAGCTGTGTTCCAAGGGTTTCGCCAGCT ATGCGGAGAGGATGGTGAAGGATTTGGCTAGGGTGATCTTCCCGGATGAAGCCATGTGTGATATGCTGATCAAGGGTTGG TGTGTTGATGGGAAGCTTGAAGAAGCTCGGAGGCTTGCTGGGGAGATGTATCGTGGAGGGTTTGAGCTTGGTGTAGTGGC TTACAACGCGATGCTAGATTGTGTGTGTGAGCTTTGTCGCCAGAAGGATCCGTTTCTGCTTCATTCGGAGGCGGAGAAGG TGCTGGTTGAGATGGACTATCGTGGGGTTCCCAGGAATGTGGAGACATTCAATGTTTTGATAACGAATTTGTGTAAGATT AGGAAGACCGAGGATGCGTTGAAATTGTTCCATAGGATGGGAGAGTGGGGATGCTATCCCAATGAGACTACATTTGTTGT TTTGATCAGGAGCTTGTATCAGGCTGCAAGGTTGGAAGAAGGGGATGAAATGATTGATAGGATGAAATCTGCTGGGTTTG GTGCTTCTCTTGATAAGAAGGCTTACTATCAGTTTCTCACAATTTTGTGTGGGATTGAGAGGGTTGAGCATGCTTTGAAG GTCTTTGCCATGATGAAAGCTGATGGGTGTGAACCTGGGATTAAGACTTATGATTTGTTGATGTCCAAATTGGGTGCTCA CAATCGCGTTGATAAGGCTAATGCTCTTTTCCATGAAGCCCAGAGTAGAGGATTGGCTGTGACTCCCAAGGAGTATGCTG TTGACCCAAGATACAAGAAGAAGAAGAAGGTCAAGGCTGTGAAGAAGAGGGAAACCTTGCCTGAGAAAATGGCTAGAAAG AGAAGACGCCTGAAAAAGATTCGGCTGAGTTATGTTAAGAAGCCAAAACGAATGAGGGGTCGAGTCTAGTGATCTCATTT TTTCAATTGCAAGGTTTTGTAATAGTTTCTTCCATATTCAATCATGTTTTCTTTGTCTCATGCTCAGTTTTACTCTTAAA TAGATTCAGAAATAAATTTTTGTATGGAAACAATCCTTTAAACAACATTGACGCATTGGTTTGGCCCTCTTTGTTAAGAG TTCCCGGAGTCTGCATTTCTAATTGACTATAATGTAGATGAAAGGGGTGTGCTAGTCCCTGTTCCAGATACTATATCCAA TTCAAGGCTTTAGGTGTTCCCTGTGGTGCATACAAGATAGTAGAAGGAAAAGGTCTCATAGAAGTTTTGATTGTATATGA TTCATAGTACGTTGTAACTTGGCCTTCTTTGCTTATTTTGGATTTTCATTAGTCCCTATCATGAAGACAGTGTCTAGGTC TTAAGTTCATAACCTACTAATCCTATCCTCTCAGCTTTTCGGTTATCTTCAGTCTCTTCTTCATTCTGCGTTTAGCCTTA ATTATGGTTATCATGTTATTCCTTTGGGAAACTGAGTTTTGAGATACAGCAAATTTTATTTATAACTTTTATTCTTTTAT GGCTTTACTATTTGCGATGAACATGCAAGTTCCAACATCTGAGATCTACCAATCTGTCATGGCTCAATGGCTCATGGCTG GGTTAGTATCACCGCTCCAATTTTCATGCTTTTGATTGAATCATTTCAAATTTCAAATAGTTGATACATGAAAGTGACAG AACACTAATTGAAAAGAGAAAAGAAAATGTTTAAAAAATCTTTGTTGCTCCCAACACGCTTCCATTTCTCTGTTGGATCT CTGCACCGGTTAAACCCTTCTCTCTTTTTTCATTCCCTTTCTTATTTTGTGTCTCCCTCTTCTCTTCCTCTCTAATCAAC AAAGAAGTTCACTCAAATAAATTAATTTAGTTTGACTCTTCTATATGTGTGTTGTATCTTAAATGTTAATTTTGTTTTCT ATCTATTCCAGTTCTGTTTCTCTAAGTCAAATGAGGAGATGCAGTTTGTTGCAGGGTACTCTCCTCCTTCTGAAAGCATG TTTTCCCGTTTCTCTTCCTGCGTCCAAATGCAAACCCTACACATCTTCAAACCCTGAAACTAAGTACAATCTTTTCCTTC ATGCTAACTCCATTTTGCAGCCGATCCAACTACTTGATGTACACTTCCTTCAAGGTTTGATTTTTATTTTGTACTTTGGT ATATATAATTTTTCTACCATGCTATTGTATAATAAGTCCTGAAGAAATGATTTTTTCTTTTTAAGGTATTATTTTCTTAT AAAAGTTCTACTTTTTAATGTTCCAATTATACTTTTTCTATATTGTAAAATGATTTTGTATTTTAAAGTATTAAGTTTGT TGTCAGAGTTGTTTTGTTTACACAAGTTCCTCTGGAGTTTCAATTTTTTGAAGGTAATCAAAGTTGTTTTGTTTACAAAA GCTATATATATTTTTTATATCAAAGCTGCTTTTAAAGTTTTTTAATGTCGTAAAAAAGGGGCATGTGTCATGTTAGTGAA ATTAGTTGTTATTGATATTTGTTTTTATATTGTTATTGTTGCATTGAAAAAATCTCCCAATAAATTGATCTTTGGTACAA CAAACTATACCAGAATTTTATAATAGGATGTTGTATTTTGGAGCCAAATGAGAAAAGCTTCTTTTTACCTACAAGTTGTA ACTCTCAGTTTAGCATATATACCGTCATTGGTTACCTCTAGAAACTTACTTTCACTTTGTTGTGTTTAAATTTATCAATT GAGATCTAAATTATCAAAAGAGCAAATGTCCATCTGAAACAGTTTTTGTATTATCATGAAACACAACTGAATGACCAATA GAAGTCATTATTATCTTTGTGTCATTTTAATTTTCCGTTTAAATTAGAGGTAATTTCTCAGTTTATAATGTTGTTGCAAT TGTTATCTGTTAAACTAGGTTTGGATTTGCAGAGAGTTATAAGAATATGTTGTTTTTTTAATGAAAACTGGTATGTTCCT CCCTAATTATCTGATGTTTGATCCTATTGTTCTTCATTATTACAGAACATGACATATATCAGGAGAACAATGCCCCATTG GTTTCTGAAAAACCTGTGTGGTTTCTAATTGTTGTTTTCTTTTCTTTAGCAGGTCATAATCTTAATGGTCAAAGATTTTC TGATACCTTTCATAAGTTTTTATTGCTATTTATATTAATACTTAAATTGGTTTGATTTAGTTGGAGGATTGTTATTTGCT CCCTCATTTGATATTTTCTTCTTTTTACTGTGCAAATGGTGCACTCCTTGAGTGAATAAGTTGCAGATGTTTTGTTTTCA TATTGGGATTTTGTATTGTCTGATCACTGATGTATGTTAGAAGATTGGTACGTTGTCTATACTTCTTAATTTGGTGATTT ATTGATTCTGTCTCATAAATTTTAGGATGAATAGCTTTGACAATAATGATTTGTTGCAATTATCATATTACCTAATGCCT TTACTCTTCTTTTATCTGGTTGCCCATACGGGATTGTTGAAGTTCATGAAAGTTAGTATCAGTCATATATCATGAAAAAA ACCACTTACAAATATGTGTCATTTCTTTCTATTTGCTCTCTTTATTAGCTTAGTTACTTCACTCTGTTTTTTAAATGATC TTATATTTTCAACAGCTCAAACTGTGTCCCAACACACTGCATGGTTCTAATCCAATTGATATGCTTTCACTGAACAATCA CATGTTCTTAGAACAATTTCATCTTGAAGTCAAGAGTCAGTCTACCACCAGTGACTATGACTTGAGTGTTTCTTTAACTG ATATCTCTAATGTAGTATTTTATCTTCAATTATTAGTCTAAAAATTTGGCAGCACGGATCTTAATTCTATAAAAAGAAGT GATGAAAAATCTAATATTCGTTTATGTAGGTAATTGAAGTCAAGAGTCGGTCTACCACATATTAATATTCTCATGGCCTA TCCTCAGCTGGAAACTATATTCCTTTTGTCTAGTGTCTTATACTTTGTCTTTTATGCCCTATTCTCTTTTAGACAAATCT CTCTCACAAAAATTCCTCTATTTCTATTGTTTTTTCTTGTCTTGTGCTAGTGTTAGCAATATCTATTATTGTTGTTTGTG TATAACTGTATATTGCTTTTTCAGTTGCCCTATTTTCTTGCTTGTTGACACACAATGTCCAAGTGTTGTTTCATCTTGGG TGGAAATTATTACATTTATTGAGGCTATACTGTGTTTATTCAATTTAATATTCCAATTTGTGTAACTTTATATGCCCACC TTCACTCCTGCATCAGTGTCAGCATTTCTGTTCAACTGGGTTCATGCGGTACTTATTTATATCTCCAGTTCAATTACAAC ATTGTTGGGAAACACTGGAGTGTGAAAATGATTTATCTTGTATTAAGTTACAGTCACTGCACTTCTCCATCAAGAATAAT ATTTTTTGTATGCCATAAACTAATTATTCAAGTTGGTTGTACATTGTAACAATCACAACATTGCATGGTTTGTGGAGCAC TTAATGAATTCTGCGTTGTACTGCCATGGTTAAAACTCGTATGCTTCTGTTGTGCTATACACTAGTTTGTATATAATGAG ATTTAGAATTCGTTTTATGAAACTCGCTTCTATTTCCTCTCTTCATTTAAGGCGGTAAAAGCAGCTAGTTATATCCAAGT TGTTATTGGCATTGCTTCAGGTTGCAATAATGAAACGTGTTCGGCACCCAAATGTGGTGCTCTTCATGGGTGCAGTTACG AAATGTCCCCATCTATCAATAGTGACAGAGTATTTGCCTAGGTGAGACAAACATTATTAATATTAATATATTTTTACGTA CATAATTAAATGCCTTATTACATGATTAAATGCCTTACAGTTGTTGTTTTATGGTATTGTGGCAGGGGTAGTTTATATCG TCTGATACATAGGCCGGCATCTGGTGAAATACTGGACCACAGAAGAAGATTACGGGTGGCTTTGGATGTGGTTTGTGTCA GATATTATTATTTTGTTACATGAATTTTTTTATTTTGTGCGTGATTTATATTATTTGTCTGAAATCTGAATGCAGGCTAA AGGGATCAATTATCTCCATTGCCTGAAACCTCCAATTGTGCACTGGGATCTCAAATCTCCAAATTTGCTAGTTGACAAAA ATTGGACAGTGAAGGTGGAATGAGACTAATTTAACAGTTTTCTATGACATATTTAAACATTTTGTGCAAGTGAATGATTT CCTTTTCCTTTCATGCTTAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCATACCGTCAAAATTTGTT GCTGGAACAGTTAAGTTTCCAACTTTATGTTCATAAGCGCAATCACATCTAGTCTACTTGTTATATTTTTCTTCACAAGT TTCATTTCTACTTCACGGCACCTCATTCTGAATCAGTGTGTAACTCTATTTTTAGCCTGAGTGGATGGCTCCAGAATTTC ATCGTGGAGAACCTTCAAATGAGAAATCTGATGTATACAGTTTTGGAGTAATCTTGTGGGAACTCGTGACCATGCAACAA CCATGGAGTGGACTTTCGCCCTCCACAGGTAAACCTAATGGGATTTATGCTCTAAATTGTAAATATTCGAAGCCAAGTAT TTTTACTTCATGTGTTTACTTGTACAGTAGTAAGGGATCACTTGCAAGAAATTGTTAATTAAAATGACATGTAATATGTC AAACAAATGCTTGGCATGATGGAACTTTCAAGTTTTACTGAGATTTTATAAAGTAATAATAACCATGTAAACTCTCAGGT AATTGGAGTTGTTGCTTTCCAGAATAGGAGGCTCGCTATCCCTCCAAACATCTCCCCTGCTTATGCCATACAATATCAGT TTTGTCTACAGTAATCTACAGTAAAAACGTGTAGATATCAGTTTTGTCCACTGTAGATTACTAAATGACCCCTTTTATAT TTTAAGTTTTAGGTCCTAATCAATAATTAACAACCTAAGTAATCTAACTAAAATTGGACTAGTGTTCATCTCATCCCCAA AGTCTTGATTCTTCCCCATCCTCTGCACCATCACCGATCTGCTCATCCTCTCTCGTCGCGCCGCGCTCACTGATCATGAG CGGCCACCTGCTCGACATCGAGGCGTACACAGGGCTCTACTCGAAGATCATGCGGCTTCTCTTCATCGCCGATACAAACA AGAACCCGACGATGAGATTAAGAAGGGCGAGAACACCCATCTCGAAGAAGATCGATGATAAACTAGCGTTGTTCATCTCC TTCGTCTCATCCCCAAAGTCTTCATTTTTCCAGAAATTCGTCTTAATCTCTCAACTTGTTCCCCATCCGATCTGCTCCAT CAACTTGGGGCTGTTCGTGTCCTCTCTCTTTCTCCTCCCGCAAAACCCTTTTCCCCAAATCACTCTCTTTGATTTCGCAC CTCAGTGGAGTGGAGTGGAGTGGAGTGGAGTTCCATTGTTTGTTTTATTTAAAATAGGATGGAAGGGAGTGGTAAGTAAT GGTCCAAGTTCCATCATGCTCCATTGGTTTCCTTCAGATTTCCTCCCCACAAAATTGGACGGAAAGGAATGGAAAGGAAA ACTGATAATCTAATAAAGTTATAAAAATACTATTTTACCCCTTGTAACCTCCCTCCATAACTCCTCCATGTTGTGACCTA ATTTTCTGCATTCACGTTCAGGTTGGAAAAAATTGGTGGGAGATGAGAAAAAATCTGCGCCATCTCTGAATCATTCTCCC TTGTTCCTTGCTTCTTGCGATTTTCTTCATTGGTTGTTCCTGCGTTTTTGGTTGCGTTAATTTTACATCTAATTCCTAGT TCATTATTTAATTTTAAATTGATGTCTACACTGAGATGTTAATCCCTAATTAACATCCAATTTTGCATCTTTATCATACA CTTTGAGTATTAATGTTATTTGATTTTTTTTTCTTTCGATGCAACATGATAATTCAATTGATCCCACTCCAAAAGTTGTT AAACTTGACAATCATGCTCAAAGCTATTTGCTGGATGATGTCGTTAAGTACGGGACTACGGGCTTATTAATCTAGAATCA ATTTAGTTTGTGCAAAGGTTTATTGTCCCTTCCAATATAAAACAAGGGCAATATAGGGATAAAAAATTCATTATTCATTC CGCTCCGTTAATTACCCAAACAATGTAGTGGTAACTTTCTTCCGTTCCATCATAAAATACCCAAACAAAGAAATGAAGTT TTAATTCCATTCTGTTCCATTATATTCCATTCCGCTCCGCTCTGTTATGTTCCGTCAATCCAAACATAGCCTTATTTGCC CATAGTGGAGTTGTGTCTTTGGTCTGGACTCAGCAGTGGTTTAAAATTTCCAGTGGAATTATTGGGGCTTGTGGTGATGA TCACCATTTTGTTGATAACATGTCCTCAAATGCTGTTGACACACTGCACAGGTTCCGCATAATTGCTTATCATTGTAACA AAAAGAACTTGTACATAGTGTGAATGGTTCTTAATAAAGCATCTATGCTGGAAAATTTGAGATTGCAGTTAGACATATAG TTATAATCTTTTTCGATTTGATTTGCTTTACTCTCTCATTAGCGTAAGTTTTTATTTTTTTATCTTTTTTGCATGACTCT GATTTGCTATGGTGTTTCTTCTCTATGTTGGTTTTACAACAAAGGTTAATGTTAATGTTATTTGGACGCACAATCTAGGC ACGCCCTTAATAAATTGAATTAAATTATAATACCTTTTAAATTGCAGAGAAGATTTGCAGCAATTTATGTATTTGTTTCA TTCTGCTCCCCTATAAGCATTGCTATGGTGTCTGCACATGTTAAAGAAATCAAGGTTTACATTATGTGGCCTCTCCTGAG GGTAGCGAGTGAGTAAGTTGTCCTTGCTTCTATTGAAACATTTCTGGGCTCCCCACCCCAGCAAGTCCCTAAAATATTCC CATTTCAAACAAGAGAGTGAAGCAAACAAGTTTTGATACTATTTGAATGTCACTGTAAACAAGTTGCATGGCCTCAACCT TTTGAAGCTCACACCTGGGCCACCTTGAAGGAACTAGCAAACCCAGACACGCACTCTCTTCTTCCAATTCTGGTAATTCC CTTTACTTATATTTTGGGATTTCATTTGTTTTTAATGTATAATTTAATTTCTTTCATTCTTTCTCTTACAGGTTCCACTG TTGTTTAGATTTCTATTTTTATTTTTTTATCCTGCTTTACTAGAGGCTATGAAGCAATAGAAATTAGTAGTAAGTTTTGA AAATATAGTCTTGACGAACCTGAGGCACTTTTGGACAAGCAAGTTCAAGAGCACACTAAATCGGATGAAGCATCTTAAGG ATGTAAAAGATGTCGAGGCTGGACTCTTGCAGTCAGAATTGGAAGCCCTTAAAGCTCAATACAGTGATTTTAAACACTCT TTTTGAGGATGAGGCTGAGAAAGAAAAACTAAGAAAGCAAGTTTTCCAGCTAAAGGGTGAACTAAAGAAGAAGGACGATG CATTGACCAGTTTCGAGAAAAGGTTCAGGGATAGTAATGGACGCACACAAGTTACTGATGGAGCTAAAACCATTCTAAAG AATAAAAAGACTGCTTTAAGTCCTCAGCATTCAAGAGAAATAGCAAGTCTGAGGGAGAAAATAAAAACGCTTGAGGTAAC TTTTCCAATACCAATAGTCTGAACACAGGCTGTTTGAGAAAAATGCTTGCTAGTTGATACCCAAATGCTATTTTCTCTAT CACTGTTTCATGTAATTTCATTTTCTATCCATGATTTTCCACTCTTCTGTATTTTCTTAGGATAAAACTAAGTTACTTGT AGCTCTGGCAATTGAGGTGGATTTGTTAATGAAAAGGATTGTTTATGGCAGGGTAAGATACAGTCAAAGGACAATGCCCT GGAAACTTCCACAACTTCATTTCTGGAAAAGGAAAATGAACCCCAGACCAAAATTGCGGAGCTAGAGCGCAAAGTAAAGG AATTAAATCAGAGTATTGCTTCACATTAGGTACACTATAATGAGTTCTGTAAACTAAGCCTATTATTGTGGTTGGGCACC TCTATCAAAGTGTATCGGTGCGCAATTGCAAGATAAAAGTTTTTTAGTTGATTTATTTTGTGAAGTTTAATTTAACTTAT GACATAGCATTGCCATACTTGCATGGAAATGACATATTGATTGAACTTTCATTCTTGAATTGTTGATTTATGAAGCTATT GAATTACATATCGGCAATAAATATGTACCTTGGCTTACTCTTCAAACAGGTTGCTCAGGATAGAAGTAATACTATTACAA ATGAGATATCTGGAGAAATTAGTGCAGGGGAGCATCTGAATGATGCTGCATATGGTTTTGAAGAAAGTGGGGCTGCGTTG TTACTCAAGAGGTTTGTCTATTTTCCTTCTATATATATTTCTCTCCCCGTGACATTAAGAAGACATTGTTTACTAATTAG AGTTTAGTTCCAGTCTGGTGATGATGACTCTTCATTTTGTCTATGTTAATCTTGTAATTTTATGAATTCAAGCCATTGAA TTGTTTAGGCATTAATTATTTTCTTGGCCATGGCAGTAATGTGAACCTGCAAGAGAAAGAAGCATGAACCTCTTTAATGG ATACTGCAGACAGCAATCTTAATGCACATTAACCAACTTGTCATCACTGAAAGAAAGAAACAAATCAATGGAAAGCGAAC TTAAAGAAGAACAGTCAACAGTCAATTGTTTGCAAGACAAGAAGAAAATGCACTTGATTTAGAACACAAACCTTTAGCTT CAAATGTTTGATCATTTTAATGGTACTAATAATGTTTGGTGGTTTTAGCTAATAAGTTCTTTGTGAATCTTATGGATAGT GCTACTAATACTTATTTTCAAGTGGTTGTAGATGTTGATTATGATTATTGTTGGATTGACTTGTGATTCCCGTGCATGCT TCTTTGGTCCAAGTCCAACACATGTTGCAAACTGCTATTTGACTTTTTTGTGCTTTCATGGAACTTTTTAGTTGTTAATG TTGCTCTCCAATTGGATAATAAAGTATATTACTAGTTGTTAATTGTTCTGGGTGATCAATGAATGATGTGCAACTTACAT GATGCTAGTTGACTTATGATCTCCCCTCATTGTTTTGTAAAAACATAAAAAAAAAATGTCAACTTGATAGTAAGTGGTAA ATGAAGTTTATTAAGTGG
CDS sequence (LotjaGi2g1v0192000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGCCATTAGCGTCTCTGCAACTCCGGCGGCTCTTGTTCCGATCCTTCCGTTCTTCTTCCATAGCATCCATCTCCTC CTGTCAAATCGAACCCTCACCCTCTCCTCCGTTTCACCACCACCACTCTTCCCATTTCCAATCCCCAACCCTTCTCACTC CATCTTCACTCTTCAAAACCAGGCATTTCTCATCATCAGAACCCTTCACCCCAACCCAAACTCTCCCAGAAGATTCGGAT CCAGTTGCCACTGCACTCTCCTCGGAGCTTCTCAAAGACTCTGACTCAGACCCTCGCTCCGTCGCGCAACACCTCAACCT GAGCTTCTCTCACGTCACACCAACCCCCGATTTAGTCCTCCAAGTCCTAAACCTCTCCCCTGGAGGCGGAAGAACCGTGT TAGGGTTCCACCAATGGCTCGCTTCGCACCCCAAATTCAACCTCACAGACGACACGCTCGCCCATTTTGTTGACTATTTC GGCCGCCGCAAGGATTTCAAGGCCACGCACGATGTTCTCTACGGCGGCGGTGGAGGGACCAAGACCCTTGTCGCGGCGAT CGACCGCCTTGTTCGCGCGGGGCGGCCGAGCCAGGCGGTTCAGTTTTTTGAGAGGATGGAGCGGGATTACGGCTTGAAGC GTGATCGCGGTTCACTGAAGGTGGTTGTGGAGAAGCTGTGTTCCAAGGGTTTCGCCAGCTATGCGGAGAGGATGGTGAAG GATTTGGCTAGGGTGATCTTCCCGGATGAAGCCATGTGTGATATGCTGATCAAGGGTTGGTGTGTTGATGGGAAGCTTGA AGAAGCTCGGAGGCTTGCTGGGGAGATGTATCGTGGAGGGTTTGAGCTTGGTGTAGTGGCTTACAACGCGATGCTAGATT GTGTGTGTGAGCTTTGTCGCCAGAAGGATCCGTTTCTGCTTCATTCGGAGGCGGAGAAGGTGCTGGTTGAGATGGACTAT CGTGGGGTTCCCAGGAATGTGGAGACATTCAATGTTTTGATAACGAATTTGTGTAAGATTAGGAAGACCGAGGATGCGTT GAAATTGTTCCATAGGATGGGAGAGTGGGGATGCTATCCCAATGAGACTACATTTGTTGTTTTGATCAGGAGCTTGTATC AGGCTGCAAGGTTGGAAGAAGGGGATGAAATGATTGATAGGATGAAATCTGCTGGGTTTGGTGCTTCTCTTGATAAGAAG GCTTACTATCAGTTTCTCACAATTTTGTGTGGGATTGAGAGGGTTGAGCATGCTTTGAAGGTCTTTGCCATGATGAAAGC TGATGGGTGTGAACCTGGGATTAAGACTTATGATTTGTTGATGTCCAAATTGGGTGCTCACAATCGCGTTGATAAGGCTA ATGCTCTTTTCCATGAAGCCCAGAGTAGAGGATTGGCTGTGACTCCCAAGGAGTATGCTGTTGACCCAAGATACAAGAAG AAGAAGAAGGTCAAGGCTGTGAAGAAGAGGGAAACCTTGCCTGAGAAAATGGCTAGAAAGAGAAGACGCCTGAAAAAGAT TCGGCTGAGTTATGTTAAGAAGCCAAAACGAATGAGGGGTCGAGTCTAG
Protein sequence (LotjaGi2g1v0192000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPLASLQLRRLLFRSFRSSSIASISSCQIEPSPSPPFHHHHSSHFQSPTLLTPSSLFKTRHFSSSEPFTPTQTLPEDSD PVATALSSELLKDSDSDPRSVAQHLNLSFSHVTPTPDLVLQVLNLSPGGGRTVLGFHQWLASHPKFNLTDDTLAHFVDYF GRRKDFKATHDVLYGGGGGTKTLVAAIDRLVRAGRPSQAVQFFERMERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVK DLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPRYKK KKKVKAVKKRETLPEKMARKRRRLKKIRLSYVKKPKRMRGRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| PANTHER | 13 | 418 | 406 | 1.8E-63 | – | |
| Gene3D | 179 | 300 | 122 | 1.3E-19 | ||
| ProSiteProfiles | 179 | 209 | 31 | 7.541 | ||
| Pfam | 187 | 209 | 23 | 0.13 | ||
| Pfam | 248 | 296 | 49 | 4.0E-7 | ||
| ProSiteProfiles | 249 | 283 | 35 | 9.723 | ||
| ProSiteProfiles | 284 | 318 | 35 | 5.711 | ||
| Gene3D | 301 | 388 | 88 | 2.9E-17 | ||
| PANTHER | 309 | 470 | 162 | 1.8E-63 | – | |
| Pfam | 326 | 372 | 47 | 1.1E-13 | ||
| ProSiteProfiles | 326 | 360 | 35 | 12.266 | ||
| TIGRFAM | 329 | 362 | 34 | 4.1E-9 | ||
| ProSiteProfiles | 361 | 395 | 35 | 9.273 | ||
| Gene3D | 389 | 464 | 76 | 7.0E-12 | ||
| ProSiteProfiles | 398 | 432 | 35 | 9.383 | ||
| Pfam | 402 | 445 | 44 | 4.6E-4 | ||
| TIGRFAM | 402 | 433 | 32 | 5.6E-4 | ||
| ProSiteProfiles | 433 | 467 | 35 | 8.506 | ||
| TIGRFAM | 436 | 467 | 32 | 0.0016 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0192000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…