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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0192000 |
Transcript ID | LotjaGi2g1v0192000.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT5G60960.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9FME4|PP438_ARATH Pentatricopeptide repeat-containing protein PNM1, mitochondrial; TrEMBL-Plants: tr|I1NIQ8|I1NIQ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0192000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62349864..62360758) extracted from Lotus japonicus Gifu genome v1.2.
CCCACATACAAACAAAGCATAAAGAAATAGGAATTTTATAAATAAGCAATCTCAGCCGTCCATTTGAAACAAACAATGCA TATAACTTCACTCCTGGTTCTTCTTCTTCTTCTGGAACCCTAAAAATGCCGCCATTAGCGTCTCTGCAACTCCGGCGGCT CTTGTTCCGATCCTTCCGTTCTTCTTCCATAGCATCCATCTCCTCCTGTCAAATCGAACCCTCACCCTCTCCTCCGTTTC ACCACCACCACTCTTCCCATTTCCAATCCCCAACCCTTCTCACTCCATCTTCACTCTTCAAAACCAGGCATTTCTCATCA TCAGAACCCTTCACCCCAACCCAAACTCTCCCAGAAGATTCGGATCCAGTTGCCACTGCACTCTCCTCGGAGCTTCTCAA AGACTCTGACTCAGACCCTCGCTCCGTCGCGCAACACCTCAACCTGAGCTTCTCTCACGTCACACCAACCCCCGATTTAG TCCTCCAAGTCCTAAACCTCTCCCCTGGAGGCGGAAGAACCGTGTTAGGGTTCCACCAATGGCTCGCTTCGCACCCCAAA TTCAACCTCACAGACGACACGCTCGCCCATTTTGTTGACTATTTCGGCCGCCGCAAGGATTTCAAGGCCACGCACGATGT TCTCTACGGCGGCGGTGGAGGGACCAAGACCCTTGTCGCGGCGATCGACCGCCTTGTTCGCGCGGGGCGGCCGAGCCAGG CGGTTCAGTTTTTTGAGAGGATGGAGCGGGATTACGGCTTGAAGCGTGATCGCGGTTCACTGAAGGTGGTTGTGGAGAAG CTGTGTTCCAAGGGTTTCGCCAGCTATGCGGAGAGGATGGTGAAGGATTTGGCTAGGGTGATCTTCCCGGATGAAGCCAT GTGTGATATGCTGATCAAGGGTTGGTGTGTTGATGGGAAGCTTGAAGAAGCTCGGAGGCTTGCTGGGGAGATGTATCGTG GAGGGTTTGAGCTTGGTGTAGTGGCTTACAACGCGATGCTAGATTGTGTGTGTGAGCTTTGTCGCCAGAAGGATCCGTTT CTGCTTCATTCGGAGGCGGAGAAGGTGCTGGTTGAGATGGACTATCGTGGGGTTCCCAGGAATGTGGAGACATTCAATGT TTTGATAACGAATTTGTGTAAGATTAGGAAGACCGAGGATGCGTTGAAATTGTTCCATAGGATGGGAGAGTGGGGATGCT ATCCCAATGAGACTACATTTGTTGTTTTGATCAGGAGCTTGTATCAGGCTGCAAGGTTGGAAGAAGGGGATGAAATGATT GATAGGATGAAATCTGCTGGGTTTGGTGCTTCTCTTGATAAGAAGGCTTACTATCAGTTTCTCACAATTTTGTGTGGGAT TGAGAGGGTTGAGCATGCTTTGAAGGTCTTTGCCATGATGAAAGCTGATGGGTGTGAACCTGGGATTAAGACTTATGATT TGTTGATGTCCAAATTGGGTGCTCACAATCGCGTTGATAAGGCTAATGCTCTTTTCCATGAAGCCCAGAGTAGAGGATTG GCTGTGACTCCCAAGGAGTATGCTGTTGACCCAAGATACAAGAAGAAGAAGAAGGTCAAGGCTGTGAAGAAGAGGGAAAC CTTGCCTGAGAAAATGGCTAGAAAGAGAAGACGCCTGAAAAAGATTCGGCTGAGTTATGTTAAGAAGCCAAAACGAATGA GGGGTCGAGTCTAGTGATCTCATTTTTTCAATTGCAAGGTTTTGTAATAGTTTCTTCCATATTCAATCATGTTTTCTTTG TCTCATGCTCAGTTTTACTCTTAAATAGATTCAGAAATAAATTTTTGTATGGAAACAATCCTTTAAACAACATTGACGCA TTGGTTTGGCCCTCTTTGTTAAGAGTTCCCGGAGTCTGCATTTCTAATTGACTATAATGTAGATGAAAGGGGTGTGCTAG TCCCTGTTCCAGATACTATATCCAATTCAAGGCTTTAGGTGTTCCCTGTGGTGCATACAAGATAGTAGAAGGAAAAGGTC TCATAGAAGTTTTGATTGTATATGATTCATAGTACGTTGTAACTTGGCCTTCTTTGCTTATTTTGGATTTTCATTAGTCC CTATCATGAAGACAGTGTCTAGGTCTTAAGTTCATAACCTACTAATCCTATCCTCTCAGCTTTTCGGTTATCTTCAGTCT CTTCTTCATTCTGCGTTTAGCCTTAATTATGGTTATCATGTTATTCCTTTGGGAAACTGAGTTTTGAGATACAGCAAATT TTATTTATAACTTTTATTCTTTTATGGCTTTACTATTTGCGATGAACATGCAAGTTCCAACATCTGAGATCTACCAATCT GTCATGGCTCAATGGCTCATGGCTGGGTTAGTATCACCGCTCCAATTTTCATGCTTTTGATTGAATCATTTCAAATTTCA AATAGTTGATACATGAAAGTGACAGAACACTAATTGAAAAGAGAAAAGAAAATGTTTAAAAAATCTTTGTTGCTCCCAAC ACGCTTCCATTTCTCTGTTGGATCTCTGCACCGGTTAAACCCTTCTCTCTTTTTTCATTCCCTTTCTTATTTTGTGTCTC CCTCTTCTCTTCCTCTCTAATCAACAAAGAAGTTCACTCAAATAAATTAATTTAGTTTGACTCTTCTATATGTGTGTTGT ATCTTAAATGTTAATTTTGTTTTCTATCTATTCCAGTTCTGTTTCTCTAAGTCAAATGAGGAGATGCAGTTTGTTGCAGG GTACTCTCCTCCTTCTGAAAGCATGTTTTCCCGTTTCTCTTCCTGCGTCCAAATGCAAACCCTACACATCTTCAAACCCT GAAACTAAGTACAATCTTTTCCTTCATGCTAACTCCATTTTGCAGCCGATCCAACTACTTGATGTACACTTCCTTCAAGG TTTGATTTTTATTTTGTACTTTGGTATATATAATTTTTCTACCATGCTATTGTATAATAAGTCCTGAAGAAATGATTTTT TCTTTTTAAGGTATTATTTTCTTATAAAAGTTCTACTTTTTAATGTTCCAATTATACTTTTTCTATATTGTAAAATGATT TTGTATTTTAAAGTATTAAGTTTGTTGTCAGAGTTGTTTTGTTTACACAAGTTCCTCTGGAGTTTCAATTTTTTGAAGGT AATCAAAGTTGTTTTGTTTACAAAAGCTATATATATTTTTTATATCAAAGCTGCTTTTAAAGTTTTTTAATGTCGTAAAA AAGGGGCATGTGTCATGTTAGTGAAATTAGTTGTTATTGATATTTGTTTTTATATTGTTATTGTTGCATTGAAAAAATCT CCCAATAAATTGATCTTTGGTACAACAAACTATACCAGAATTTTATAATAGGATGTTGTATTTTGGAGCCAAATGAGAAA AGCTTCTTTTTACCTACAAGTTGTAACTCTCAGTTTAGCATATATACCGTCATTGGTTACCTCTAGAAACTTACTTTCAC TTTGTTGTGTTTAAATTTATCAATTGAGATCTAAATTATCAAAAGAGCAAATGTCCATCTGAAACAGTTTTTGTATTATC ATGAAACACAACTGAATGACCAATAGAAGTCATTATTATCTTTGTGTCATTTTAATTTTCCGTTTAAATTAGAGGTAATT TCTCAGTTTATAATGTTGTTGCAATTGTTATCTGTTAAACTAGGTTTGGATTTGCAGAGAGTTATAAGAATATGTTGTTT TTTTAATGAAAACTGGTATGTTCCTCCCTAATTATCTGATGTTTGATCCTATTGTTCTTCATTATTACAGAACATGACAT ATATCAGGAGAACAATGCCCCATTGGTTTCTGAAAAACCTGTGTGGTTTCTAATTGTTGTTTTCTTTTCTTTAGCAGGTC ATAATCTTAATGGTCAAAGATTTTCTGATACCTTTCATAAGTTTTTATTGCTATTTATATTAATACTTAAATTGGTTTGA TTTAGTTGGAGGATTGTTATTTGCTCCCTCATTTGATATTTTCTTCTTTTTACTGTGCAAATGGTGCACTCCTTGAGTGA ATAAGTTGCAGATGTTTTGTTTTCATATTGGGATTTTGTATTGTCTGATCACTGATGTATGTTAGAAGATTGGTACGTTG TCTATACTTCTTAATTTGGTGATTTATTGATTCTGTCTCATAAATTTTAGGATGAATAGCTTTGACAATAATGATTTGTT GCAATTATCATATTACCTAATGCCTTTACTCTTCTTTTATCTGGTTGCCCATACGGGATTGTTGAAGTTCATGAAAGTTA GTATCAGTCATATATCATGAAAAAAACCACTTACAAATATGTGTCATTTCTTTCTATTTGCTCTCTTTATTAGCTTAGTT ACTTCACTCTGTTTTTTAAATGATCTTATATTTTCAACAGCTCAAACTGTGTCCCAACACACTGCATGGTTCTAATCCAA TTGATATGCTTTCACTGAACAATCACATGTTCTTAGAACAATTTCATCTTGAAGTCAAGAGTCAGTCTACCACCAGTGAC TATGACTTGAGTGTTTCTTTAACTGATATCTCTAATGTAGTATTTTATCTTCAATTATTAGTCTAAAAATTTGGCAGCAC GGATCTTAATTCTATAAAAAGAAGTGATGAAAAATCTAATATTCGTTTATGTAGGTAATTGAAGTCAAGAGTCGGTCTAC CACATATTAATATTCTCATGGCCTATCCTCAGCTGGAAACTATATTCCTTTTGTCTAGTGTCTTATACTTTGTCTTTTAT GCCCTATTCTCTTTTAGACAAATCTCTCTCACAAAAATTCCTCTATTTCTATTGTTTTTTCTTGTCTTGTGCTAGTGTTA GCAATATCTATTATTGTTGTTTGTGTATAACTGTATATTGCTTTTTCAGTTGCCCTATTTTCTTGCTTGTTGACACACAA TGTCCAAGTGTTGTTTCATCTTGGGTGGAAATTATTACATTTATTGAGGCTATACTGTGTTTATTCAATTTAATATTCCA ATTTGTGTAACTTTATATGCCCACCTTCACTCCTGCATCAGTGTCAGCATTTCTGTTCAACTGGGTTCATGCGGTACTTA TTTATATCTCCAGTTCAATTACAACATTGTTGGGAAACACTGGAGTGTGAAAATGATTTATCTTGTATTAAGTTACAGTC ACTGCACTTCTCCATCAAGAATAATATTTTTTGTATGCCATAAACTAATTATTCAAGTTGGTTGTACATTGTAACAATCA CAACATTGCATGGTTTGTGGAGCACTTAATGAATTCTGCGTTGTACTGCCATGGTTAAAACTCGTATGCTTCTGTTGTGC TATACACTAGTTTGTATATAATGAGATTTAGAATTCGTTTTATGAAACTCGCTTCTATTTCCTCTCTTCATTTAAGGCGG TAAAAGCAGCTAGTTATATCCAAGTTGTTATTGGCATTGCTTCAGGTTGCAATAATGAAACGTGTTCGGCACCCAAATGT GGTGCTCTTCATGGGTGCAGTTACGAAATGTCCCCATCTATCAATAGTGACAGAGTATTTGCCTAGGTGAGACAAACATT ATTAATATTAATATATTTTTACGTACATAATTAAATGCCTTATTACATGATTAAATGCCTTACAGTTGTTGTTTTATGGT ATTGTGGCAGGGGTAGTTTATATCGTCTGATACATAGGCCGGCATCTGGTGAAATACTGGACCACAGAAGAAGATTACGG GTGGCTTTGGATGTGGTTTGTGTCAGATATTATTATTTTGTTACATGAATTTTTTTATTTTGTGCGTGATTTATATTATT TGTCTGAAATCTGAATGCAGGCTAAAGGGATCAATTATCTCCATTGCCTGAAACCTCCAATTGTGCACTGGGATCTCAAA TCTCCAAATTTGCTAGTTGACAAAAATTGGACAGTGAAGGTGGAATGAGACTAATTTAACAGTTTTCTATGACATATTTA AACATTTTGTGCAAGTGAATGATTTCCTTTTCCTTTCATGCTTAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAA CACTTTCATACCGTCAAAATTTGTTGCTGGAACAGTTAAGTTTCCAACTTTATGTTCATAAGCGCAATCACATCTAGTCT ACTTGTTATATTTTTCTTCACAAGTTTCATTTCTACTTCACGGCACCTCATTCTGAATCAGTGTGTAACTCTATTTTTAG CCTGAGTGGATGGCTCCAGAATTTCATCGTGGAGAACCTTCAAATGAGAAATCTGATGTATACAGTTTTGGAGTAATCTT GTGGGAACTCGTGACCATGCAACAACCATGGAGTGGACTTTCGCCCTCCACAGGTAAACCTAATGGGATTTATGCTCTAA ATTGTAAATATTCGAAGCCAAGTATTTTTACTTCATGTGTTTACTTGTACAGTAGTAAGGGATCACTTGCAAGAAATTGT TAATTAAAATGACATGTAATATGTCAAACAAATGCTTGGCATGATGGAACTTTCAAGTTTTACTGAGATTTTATAAAGTA ATAATAACCATGTAAACTCTCAGGTAATTGGAGTTGTTGCTTTCCAGAATAGGAGGCTCGCTATCCCTCCAAACATCTCC CCTGCTTATGCCATACAATATCAGTTTTGTCTACAGTAATCTACAGTAAAAACGTGTAGATATCAGTTTTGTCCACTGTA GATTACTAAATGACCCCTTTTATATTTTAAGTTTTAGGTCCTAATCAATAATTAACAACCTAAGTAATCTAACTAAAATT GGACTAGTGTTCATCTCATCCCCAAAGTCTTGATTCTTCCCCATCCTCTGCACCATCACCGATCTGCTCATCCTCTCTCG TCGCGCCGCGCTCACTGATCATGAGCGGCCACCTGCTCGACATCGAGGCGTACACAGGGCTCTACTCGAAGATCATGCGG CTTCTCTTCATCGCCGATACAAACAAGAACCCGACGATGAGATTAAGAAGGGCGAGAACACCCATCTCGAAGAAGATCGA TGATAAACTAGCGTTGTTCATCTCCTTCGTCTCATCCCCAAAGTCTTCATTTTTCCAGAAATTCGTCTTAATCTCTCAAC TTGTTCCCCATCCGATCTGCTCCATCAACTTGGGGCTGTTCGTGTCCTCTCTCTTTCTCCTCCCGCAAAACCCTTTTCCC CAAATCACTCTCTTTGATTTCGCACCTCAGTGGAGTGGAGTGGAGTGGAGTGGAGTTCCATTGTTTGTTTTATTTAAAAT AGGATGGAAGGGAGTGGTAAGTAATGGTCCAAGTTCCATCATGCTCCATTGGTTTCCTTCAGATTTCCTCCCCACAAAAT TGGACGGAAAGGAATGGAAAGGAAAACTGATAATCTAATAAAGTTATAAAAATACTATTTTACCCCTTGTAACCTCCCTC CATAACTCCTCCATGTTGTGACCTAATTTTCTGCATTCACGTTCAGGTTGGAAAAAATTGGTGGGAGATGAGAAAAAATC TGCGCCATCTCTGAATCATTCTCCCTTGTTCCTTGCTTCTTGCGATTTTCTTCATTGGTTGTTCCTGCGTTTTTGGTTGC GTTAATTTTACATCTAATTCCTAGTTCATTATTTAATTTTAAATTGATGTCTACACTGAGATGTTAATCCCTAATTAACA TCCAATTTTGCATCTTTATCATACACTTTGAGTATTAATGTTATTTGATTTTTTTTTCTTTCGATGCAACATGATAATTC AATTGATCCCACTCCAAAAGTTGTTAAACTTGACAATCATGCTCAAAGCTATTTGCTGGATGATGTCGTTAAGTACGGGA CTACGGGCTTATTAATCTAGAATCAATTTAGTTTGTGCAAAGGTTTATTGTCCCTTCCAATATAAAACAAGGGCAATATA GGGATAAAAAATTCATTATTCATTCCGCTCCGTTAATTACCCAAACAATGTAGTGGTAACTTTCTTCCGTTCCATCATAA AATACCCAAACAAAGAAATGAAGTTTTAATTCCATTCTGTTCCATTATATTCCATTCCGCTCCGCTCTGTTATGTTCCGT CAATCCAAACATAGCCTTATTTGCCCATAGTGGAGTTGTGTCTTTGGTCTGGACTCAGCAGTGGTTTAAAATTTCCAGTG GAATTATTGGGGCTTGTGGTGATGATCACCATTTTGTTGATAACATGTCCTCAAATGCTGTTGACACACTGCACAGGTTC CGCATAATTGCTTATCATTGTAACAAAAAGAACTTGTACATAGTGTGAATGGTTCTTAATAAAGCATCTATGCTGGAAAA TTTGAGATTGCAGTTAGACATATAGTTATAATCTTTTTCGATTTGATTTGCTTTACTCTCTCATTAGCGTAAGTTTTTAT TTTTTTATCTTTTTTGCATGACTCTGATTTGCTATGGTGTTTCTTCTCTATGTTGGTTTTACAACAAAGGTTAATGTTAA TGTTATTTGGACGCACAATCTAGGCACGCCCTTAATAAATTGAATTAAATTATAATACCTTTTAAATTGCAGAGAAGATT TGCAGCAATTTATGTATTTGTTTCATTCTGCTCCCCTATAAGCATTGCTATGGTGTCTGCACATGTTAAAGAAATCAAGG TTTACATTATGTGGCCTCTCCTGAGGGTAGCGAGTGAGTAAGTTGTCCTTGCTTCTATTGAAACATTTCTGGGCTCCCCA CCCCAGCAAGTCCCTAAAATATTCCCATTTCAAACAAGAGAGTGAAGCAAACAAGTTTTGATACTATTTGAATGTCACTG TAAACAAGTTGCATGGCCTCAACCTTTTGAAGCTCACACCTGGGCCACCTTGAAGGAACTAGCAAACCCAGACACGCACT CTCTTCTTCCAATTCTGGTAATTCCCTTTACTTATATTTTGGGATTTCATTTGTTTTTAATGTATAATTTAATTTCTTTC ATTCTTTCTCTTACAGGTTCCACTGTTGTTTAGATTTCTATTTTTATTTTTTTATCCTGCTTTACTAGAGGCTATGAAGC AATAGAAATTAGTAGTAAGTTTTGAAAATATAGTCTTGACGAACCTGAGGCACTTTTGGACAAGCAAGTTCAAGAGCACA CTAAATCGGATGAAGCATCTTAAGGATGTAAAAGATGTCGAGGCTGGACTCTTGCAGTCAGAATTGGAAGCCCTTAAAGC TCAATACAGTGATTTTAAACACTCTTTTTGAGGATGAGGCTGAGAAAGAAAAACTAAGAAAGCAAGTTTTCCAGCTAAAG GGTGAACTAAAGAAGAAGGACGATGCATTGACCAGTTTCGAGAAAAGGTTCAGGGATAGTAATGGACGCACACAAGTTAC TGATGGAGCTAAAACCATTCTAAAGAATAAAAAGACTGCTTTAAGTCCTCAGCATTCAAGAGAAATAGCAAGTCTGAGGG AGAAAATAAAAACGCTTGAGGTAACTTTTCCAATACCAATAGTCTGAACACAGGCTGTTTGAGAAAAATGCTTGCTAGTT GATACCCAAATGCTATTTTCTCTATCACTGTTTCATGTAATTTCATTTTCTATCCATGATTTTCCACTCTTCTGTATTTT CTTAGGATAAAACTAAGTTACTTGTAGCTCTGGCAATTGAGGTGGATTTGTTAATGAAAAGGATTGTTTATGGCAGGGTA AGATACAGTCAAAGGACAATGCCCTGGAAACTTCCACAACTTCATTTCTGGAAAAGGAAAATGAACCCCAGACCAAAATT GCGGAGCTAGAGCGCAAAGTAAAGGAATTAAATCAGAGTATTGCTTCACATTAGGTACACTATAATGAGTTCTGTAAACT AAGCCTATTATTGTGGTTGGGCACCTCTATCAAAGTGTATCGGTGCGCAATTGCAAGATAAAAGTTTTTTAGTTGATTTA TTTTGTGAAGTTTAATTTAACTTATGACATAGCATTGCCATACTTGCATGGAAATGACATATTGATTGAACTTTCATTCT TGAATTGTTGATTTATGAAGCTATTGAATTACATATCGGCAATAAATATGTACCTTGGCTTACTCTTCAAACAGGTTGCT CAGGATAGAAGTAATACTATTACAAATGAGATATCTGGAGAAATTAGTGCAGGGGAGCATCTGAATGATGCTGCATATGG TTTTGAAGAAAGTGGGGCTGCGTTGTTACTCAAGAGGTTTGTCTATTTTCCTTCTATATATATTTCTCTCCCCGTGACAT TAAGAAGACATTGTTTACTAATTAGAGTTTAGTTCCAGTCTGGTGATGATGACTCTTCATTTTGTCTATGTTAATCTTGT AATTTTATGAATTCAAGCCATTGAATTGTTTAGGCATTAATTATTTTCTTGGCCATGGCAGTAATGTGAACCTGCAAGAG AAAGAAGCATGAACCTCTTTAATGGATACTGCAGACAGCAATCTTAATGCACATTAACCAACTTGTCATCACTGAAAGAA AGAAACAAATCAATGGAAAGCGAACTTAAAGAAGAACAGTCAACAGTCAATTGTTTGCAAGACAAGAAGAAAATGCACTT GATTTAGAACACAAACCTTTAGCTTCAAATGTTTGATCATTTTAATGGTACTAATAATGTTTGGTGGTTTTAGCTAATAA GTTCTTTGTGAATCTTATGGATAGTGCTACTAATACTTATTTTCAAGTGGTTGTAGATGTTGATTATGATTATTGTTGGA TTGACTTGTGATTCCCGTGCATGCTTCTTTGGTCCAAGTCCAACACATGTTGCAAACTGCTATTTGACTTTTTTGTGCTT TCATGGAACTTTTTAGTTGTTAATGTTGCTCTCCAATTGGATAATAAAGTATATTACTAGTTGTTAATTGTTCTGGGTGA TCAATGAATGATGTGCAACTTACATGATGCTAGTTGACTTATGATCTCCCCTCATTGTTTTGTAAAAACATAAAAAAAAA ATGTCAACTTGATAG
CDS sequence (LotjaGi2g1v0192000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGCCATTAGCGTCTCTGCAACTCCGGCGGCTCTTGTTCCGATCCTTCCGTTCTTCTTCCATAGCATCCATCTCCTC CTGTCAAATCGAACCCTCACCCTCTCCTCCGTTTCACCACCACCACTCTTCCCATTTCCAATCCCCAACCCTTCTCACTC CATCTTCACTCTTCAAAACCAGGCATTTCTCATCATCAGAACCCTTCACCCCAACCCAAACTCTCCCAGAAGATTCGGAT CCAGTTGCCACTGCACTCTCCTCGGAGCTTCTCAAAGACTCTGACTCAGACCCTCGCTCCGTCGCGCAACACCTCAACCT GAGCTTCTCTCACGTCACACCAACCCCCGATTTAGTCCTCCAAGTCCTAAACCTCTCCCCTGGAGGCGGAAGAACCGTGT TAGGGTTCCACCAATGGCTCGCTTCGCACCCCAAATTCAACCTCACAGACGACACGCTCGCCCATTTTGTTGACTATTTC GGCCGCCGCAAGGATTTCAAGGCCACGCACGATGTTCTCTACGGCGGCGGTGGAGGGACCAAGACCCTTGTCGCGGCGAT CGACCGCCTTGTTCGCGCGGGGCGGCCGAGCCAGGCGGTTCAGTTTTTTGAGAGGATGGAGCGGGATTACGGCTTGAAGC GTGATCGCGGTTCACTGAAGGTGGTTGTGGAGAAGCTGTGTTCCAAGGGTTTCGCCAGCTATGCGGAGAGGATGGTGAAG GATTTGGCTAGGGTGATCTTCCCGGATGAAGCCATGTGTGATATGCTGATCAAGGGTTGGTGTGTTGATGGGAAGCTTGA AGAAGCTCGGAGGCTTGCTGGGGAGATGTATCGTGGAGGGTTTGAGCTTGGTGTAGTGGCTTACAACGCGATGCTAGATT GTGTGTGTGAGCTTTGTCGCCAGAAGGATCCGTTTCTGCTTCATTCGGAGGCGGAGAAGGTGCTGGTTGAGATGGACTAT CGTGGGGTTCCCAGGAATGTGGAGACATTCAATGTTTTGATAACGAATTTGTGTAAGATTAGGAAGACCGAGGATGCGTT GAAATTGTTCCATAGGATGGGAGAGTGGGGATGCTATCCCAATGAGACTACATTTGTTGTTTTGATCAGGAGCTTGTATC AGGCTGCAAGGTTGGAAGAAGGGGATGAAATGATTGATAGGATGAAATCTGCTGGGTTTGGTGCTTCTCTTGATAAGAAG GCTTACTATCAGTTTCTCACAATTTTGTGTGGGATTGAGAGGGTTGAGCATGCTTTGAAGGTCTTTGCCATGATGAAAGC TGATGGGTGTGAACCTGGGATTAAGACTTATGATTTGTTGATGTCCAAATTGGGTGCTCACAATCGCGTTGATAAGGCTA ATGCTCTTTTCCATGAAGCCCAGAGTAGAGGATTGGCTGTGACTCCCAAGGAGTATGCTGTTGACCCAAGATACAAGAAG AAGAAGAAGGTCAAGGCTGTGAAGAAGAGGGAAACCTTGCCTGAGAAAATGGCTAGAAAGAGAAGACGCCTGAAAAAGAT TCGGCTGAGTTATGTTAAGAAGCCAAAACGAATGAGGGGTCGAGTCTAG
Protein sequence (LotjaGi2g1v0192000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPLASLQLRRLLFRSFRSSSIASISSCQIEPSPSPPFHHHHSSHFQSPTLLTPSSLFKTRHFSSSEPFTPTQTLPEDSD PVATALSSELLKDSDSDPRSVAQHLNLSFSHVTPTPDLVLQVLNLSPGGGRTVLGFHQWLASHPKFNLTDDTLAHFVDYF GRRKDFKATHDVLYGGGGGTKTLVAAIDRLVRAGRPSQAVQFFERMERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVK DLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPRYKK KKKVKAVKKRETLPEKMARKRRRLKKIRLSYVKKPKRMRGRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
PANTHER | 13 | 418 | 406 | 1.8E-63 | – | |
Gene3D | 179 | 300 | 122 | 1.3E-19 | ||
ProSiteProfiles | 179 | 209 | 31 | 7.541 | ||
Pfam | 187 | 209 | 23 | 0.13 | ||
Pfam | 248 | 296 | 49 | 4.0E-7 | ||
ProSiteProfiles | 249 | 283 | 35 | 9.723 | ||
ProSiteProfiles | 284 | 318 | 35 | 5.711 | ||
Gene3D | 301 | 388 | 88 | 2.9E-17 | ||
PANTHER | 309 | 470 | 162 | 1.8E-63 | – | |
Pfam | 326 | 372 | 47 | 1.1E-13 | ||
ProSiteProfiles | 326 | 360 | 35 | 12.266 | ||
TIGRFAM | 329 | 362 | 34 | 4.1E-9 | ||
ProSiteProfiles | 361 | 395 | 35 | 9.273 | ||
Gene3D | 389 | 464 | 76 | 7.0E-12 | ||
ProSiteProfiles | 398 | 432 | 35 | 9.383 | ||
Pfam | 402 | 445 | 44 | 4.6E-4 | ||
TIGRFAM | 402 | 433 | 32 | 5.6E-4 | ||
ProSiteProfiles | 433 | 467 | 35 | 8.506 | ||
TIGRFAM | 436 | 467 | 32 | 0.0016 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0192000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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