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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0206300 |
| Transcript ID | LotjaGi2g1v0206300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; TAIR: AT3G18390.1 CRS1 / YhbY (CRM) domain-containing protein; Swiss-Prot: sp|A7XN92|CFM3_MAIZE CRM-domain containing factor CFM3, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2RJN1|A0A0B2RJN1_GLYSO Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Found in the gene: LotjaGi2g1v0206300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:64983064..64990666) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAACTAAAAAATCTCAGTTTCCCCAGGAAAAACAACCTTATCATATCTTGTCTCTGTTCCACTGTGTCTTCCCCTT CAACTCTCCTCTATTCCATTCATCTCTGCAACATTCTCATCATCCAAACAAACACAGCACCCAAAATGCACCACCACTGA ACAACAACAACCTCAAAACAATGGCGTTCACCAACACCACTGGTAAACTCTCAGAATTATCTTTCAGTTCATCACCATCA TCACTCTCACTCTCACTCAACCTTCCTCGCTTTTTCACTCTCACCCATCTCTTCCTCCCTCATTCCAAACCCTCTTTTCG CACTCTCACCTTCTCTTCTCTCCGAACCAGCCACCACCACAATTCCTCCCCAAAACCCAACCCCACCGCGCCCTGGCTCG CCAAAACCGCCTCACCTCCCAAAAGGGTCTCCGAATCTGCCACCGAAGAAGACCCATCGAACCGTCAACCGGGTATTCGA CAAAACCCGGTTGAAAGGATTGTTCTCCGGTTGCGGAACCTGGGGTTGGTTTCTGATGAAGATGAGGAAGCAGCAGCAGC AGGAGGAGAAGAAGAAGGAGAAGATAGGGTCAGTCCATTGCCGGTGACCGGCGAGGAGAAGCTGGGGGAGTTGCTGAGGC GGGAATGGGTTCGTCCTGATGCCGGGTTGCTGGAGGATGATGATGAGGGTGAGGAGGGGGTGTTGCCGTGGCAGAAAGAG GAAGAGGGGTTTGTGGGTAGTGGGGTTGAGGAGGGGTTGAGGAGGAGGATGTTAAGGGCTCCAAGTTTGGCTGAGTTGAC ACTTGAGGATGAGTTGTTGAGGAGGTTGAGGAGAGAGGGGATGCGTGTGAGGGAGAGGATTAGTATCCCCAAAGCTGGTC TCACAAAAGATGTGATGGATAAGATTCACGAGAAGTGGAGGAAGGAGGAGTTGGTGAGGCTCAAGTTTCATGAGGAGCTT GCGCGGAACATGAAGATTGCTCATGAGATTGTTGAGGTTTCTTTACTTGCCTTGCCTTTGTTTTGCTTCCATTGCATTCC TTCCTTTCACTTGGAAAATGAATGTATGTGTGGCATCAATAAATTGCTCATCAATGTATGTATGTTTGTTTTGTTCTTGT TTTGGTGGATTTTCGGAGTTGCATTCAAAACAAGGAAAGCATACACCCTTCAAATAGTAGCGATCTTGAGTAGTATTAAC TTCATGTGTTCTGTTAGTAGTAGTAATAGTCTCTTTTTAATTTAAGATGTATTTTTTTGTTTATGTATTCTGTTATAGTC GTGTCATGTCTCACTTTAAAAATTTGCCATAGCTTTGTGTCTGTGTCCTGTGTCGTGTCATATGTGTGTTCGTGTCGTAT TCATCCTTCTTAGATTTGGAATTGGCACGTGTCTTACTTGTCAGTCAAGTCAGTTGTCATTGCTGCTATGTGAGAGTGAA AGAGACCATTGTGCAGAGTGTGTATACAACTTCATGCTTGCTTGTATGTTAAATGTTAGTGGTTGTTATTGTGTTGAAGA ACATATCAACTGACCTGTTGTAGTGTGCAGCGTCGAACGGGAGGATTGGTTACATGGAGATCGGGAAGTATTATGATGGT GTATCGTGGTATTAATTATCAAGGGCCTCCCTCCACGAAGGAACTTGATGAAAAAGAAGGTGATGGCTTTTTTATCCCGG ATGTCTCATCAGGAAGCTTGCCAAGCACTAAAGACAGTAATGCAATTGCAAACTCATCCCTGGAGAAGAGTGAGCTAGCT GCAAGGAATCAGGAACAGCCTAAGAACATGACGGAAGAGGAAGCAGAGTACAATGCGCTGCTTGATGGTTTGGGTCCTCG TTTTGTTGAATGGTGGGGTACAGGAGTACTTCCTGTCGATGCTGATTTACTTCCCCGTACAGTTCCTGGTTACAAAACAC CTTTTAGGCTTCTTCCTGCAGGGATGCGTTCTCGACTAACAAATGCAGAGATGACCAATTTAAGAAAACTTGCAAAATCA CTTCCTTGCCATTTTTCCTTGGGTAAAATTTTCATCCACTACAGTATTTTATAAATTTATTTTCATTTTATTTATAGAAA TCTTTCTTTGGACTTCATGAAGGGAGAAATAGAAATCACCAAGGTCTGGCATGTGCTATTCTTAAGCTTTGGGAAAAAAG TTTACTTGCAAAGATTGCTATCAAACGTGGTATCCAGAACACAAACAATAAATTAATGGCTGATGAGCTCAAGGTATTTG TAATTTTGCAACGAAATGCTTGTGCAACATGTTTGTATCTAGTTTAACGCATCAATTCTAAAAGTGCTGATTGTTGAAGC TGCAAAGCTGATACAATCAATTAGGGTAGTTGAGTGATTGAGATTATTATGTTAATAGATCAGTTACTAATATGTCTAAG GCCCTGTAATTGATGATCTCATCAAGACAATTCTGTTGTATTCTAAATACTTTTTTTTGGTTATAATTCAATTATCCTCT GAAGATGTTGGCTATACTTATATTGAGTAACACTAAGGTGTCACCGACCAAAACCAGTTGTTTTCAGCTTTTCCAATAAT TTTAGCCGCTAGCAAATAATTACAGTTTGGAACAATAAAAAGGAATGATATGCTCAAAGAACTAACATGCTCTTTCCATC TATGCCCAAAATATCACTTTTGTTAAAACAATTATTTTATTTTGAACATATTAATACTCATTCTCTTGTCTGATGCAATG TGGCTGAAGCTATGTTTTTAACATTGTCATTTCTTTTGTTGATAAGGCTTCATGAGCTAAGAATATGGAACAAGGCATTA GTTCTGTTAATTTGAATTTCAGAAAAGTGATTTTTCCCCTGTTATGGTGCAGACATTAACAGGAGGCACCTTGCTGCTAA GGAATAAATATTACATTGTTATATATCGTGGGAAGGACTTTGTTCCAACAGATGTGGCTGCAGTTTTAGCTGAAAGACAG GAATTGACAAAACAGGTACAAGATGTTGAAGAGAAGGTGCGTTGCAGAGCTGTTGATGCAACATCAGGACAAGGTGAAGC AACAACACCGGCAGGCGCTGCAGTTTTAGCTGAAAGACAGGAGTTGACAGAACAGGTACAAGATGTTGAAGAGAAGGTGC ATTGCAGAGCTGTTGATGCAACATCAGGACAAGGTGAATCAACAACACCGGCAGGCTCATTAGCAGAGTTTTATGAGGCC AAGGCTCGTTGGGGAAGGGACATATCTACGGAAGAACGTGAGAAGATGAAGGAAGAAGTTGCCAATGCCAAGACTGTGAA GCTTGTCAGGCATACTGAGCATAAGCTATCTCTTGTAAGCATCTACATATTTTATGAAGATATGCTTGAGATAGTTCTTG GTTTATATGAACAGAAAGTCAGACTTGGTTTATAATGCTTTAGTGGAAATCAGTGTTATTATAAAGAGTATTCCTCAGAT TAGAAGAAAATATAAATCCAGTCAGCTTTTTTCTCCCCTTATTTTTTATTGCTGTATGTTTGCTAATGCCTACTTACAGT TTTATTGTAAATTTCACTTTAGATTTTAAATTAATCTGAATGAGATAGTAATTAATTTCAACTGCATATGGTTATAACGC TCAATTGTATACTATATATATTTGTCTGCTTGCAGCTGGCTATTACTTATTTGAACAAAATCTACAATGCAGCATAATTA GCTGGGTCCTGGTTAACATAATATGTCTTGTATCTGTTTGTCATGGTCTTCTTAACAACATTTAACTTTCTTTCCATATT TGCGACTCTTATGCATGAATAGGCCCAGGCCAAAAAGCTTAGAGCAGAAAAGCTGTTAGCCAAAATAGAAGCAGCTATGG TTCCAGGTGGTCCTGATTATGACCAGGAAACCATCACAGAGGAAGAGCGTGTCGTGTTCCGTAGGATTGGTTTGAGAATG AAGGCATACTTACCACTTGGTGAGTAAATGCTTAACTGCACAAAAGTTGCCCGATTGTAACTATGCAATACTGACACCTT TTGATGAAAATGTCCAGGTATACGTGGTGTTTTTGATGGTGTCATTGAAAATATGCATTTGCATTGGAAACACAGGGAAC TTGTAAAATTGATATCAAAACAAAAGACTCTGGCTTTTGTTGAAGACACAGCAAGGTTACTGGAATATGAGAGTGGTGGA ATACTAGTGGCAATAGAAAGAGTTTCTAAAGGATTTGCTCTTATTTATTATCGTGGAAAGAATTATAAACGGCCCATTAC TCTCAGGCCTAGAAACCTTCTAACAAAGCAAAAGGCATTGAAGCGTTCCATAGCCATGCAACGCCATGAGGTTCCTGTTT CTAAATGACAATTACTAATCTAGTTATCTCTTACAGCCTTACTCTGTAATTTTACCTTTGATTTTTCTTGAACTGTGCAG GCTCTGAGTCAGCATATTACAGAACTGGAAAAAAATATAGACGAAATGAACAAAGAACTTGTAAGTATTAACTTATCAGT TATCATAATTTATTTAGTTACAATTTTATAAAGAGGAGATGTTACTCCAAAAATTTAGGCAATTAAATGATTTGACTGGT TGTAGTCTCTGAGTAGATTTTTACTTCATTATCACCAATTGAAAGGACTGGGATAACCCTCTTCAAAAGTATCTTGGTTT TGCATAATCTTCAATCAATATTAGCAATTGAAGCCCTTCTGCCTTCTGAGCTTAAACTGAGGTTATGTTATAGGGTCTAC TTTAGTTATTCAACTTCAACACATGGGATCGGTCATTTACTGAAATCAGCACATGACTCCAAAATATGTTTTTGTATGAT TTTATATATGCACATCATACATCCTATGCCCTAACTCCTGCTTTGTCCCAATGTTGGCATTTACATAAAGTATTTTTGGA ATTTTACTCTACTCAAACATATTTGAAAATAGTATCAACACATGACCTACTAACAGGTCAGCACTGTGGTTTGTCTAAGG TCCCCTGTTAGGAAATAACACAGCTGAAGAAGTAAAATAAACCAGGAGCGCAATCAACAACACAAGAATATAACGTGGAA ACTCCAAAACCGGAGAAAAAACCACGGCCGTTGTCAAAACCGACAACCAGAAAATAAACACTATGTGAAAATTGTTACAA CACATAGACTTCACTCTCAACCACCCCATAACCCCAGTACACCCACACTCTCCAAAGTAAATATTTGAACTACATCTCAC AATACTCTAAAACAAGAGCATAAGAGAAAAAGAAAACACAAATATAAACTTAAAGTGTTTTCAGGTGCTACATCTTTGGT GTTTTTGGTGTGTTGAAACAAGGAGCCTGAGATCCCTATATATAGTCTTGAACCCTCCCACGCCTCACTAATCTAAGCGA TGTGGGACTTCTCCAAGATGCATAACTTGATCTTTTTTCTCCTTCATTAGCAATGTGGGACTTACATTGCAATCAACCCC AACAGTCCCTACATCAGCTTGTCTAATTTATTCTTTTATCAGGGCGTGTCTCAAGATTTGGAGGTTCAAGACAAGTGGAG CATGGAGGAAGAGGACAAAAAACAACTAGACCCCATCTCAGAACTCACCCAAGTGAGATACCGCTCCCCTCTCCTTATTT TCTTATCTGCTTTACTTTGGGATTGCTATCAATGGTTTTTATAATTTCCTCATACTTATAGAGTGTAGTTCTCATATATA ACTTAGGCTGTAAGATTTGAAATCTAATATAGGAAGGTTATATTAACAACCCTTCCTTCTAATTTTATAAATTAAACTTC CTTCTCCATTTCATAGACAGGAAGGGAAACTACTTTTGAACATTTACCATTCACTTGGTGTGAGTACTTTAGAAGGTGAA ATGAACATTTTGGGTGAAGTTCCAAAGTCGATATTAAGGGTATCTAAAACTCTTTTTCATCTTTTAAGTTCAAATTCAAT GATATAGAGTTCAAAATTAGTTGCTAGAACCACTGAAAGTTTAAGAGAAGAACGATGCTTGTTTGTATTTGCTAACCTAT AATAAGGTTCATTTATATCAAAATGGACCGATATGGAGGGGAGTGTAGTTTACCCATGTAGAAGTGACTATTATGGAGTA TGAAAATGTATAACATTAATTTACTCATCAGCTGAAAAAGGGAAAGGAGCAAAAAAATCGATAGAAAGAAAATACGAATG GAATAGTTTTTCTTTTCAATAACCATTAACTTTTGCAGTTGTTATTTGCAGAGTGAGGATGAGGATTCTGATGGTTTTGA TGATGAGGAAGACTCCGATTGGGATGAAGATGAGGACGCTGAGTTTCCAGAATTCAACATTGATGGGCATCCTTGAAGGC AGGTTGACAGATATGCATTGGAGTTTCTCTATGACATCTGTCATTGCCTTCGGCGAGATAGGTATCTACTTTGCTATTTG CTATTTGGTCACATAGCTGATAAGTTCACAACCACAATCTTCGTAGACTGCATTTTAGGAAATAATTAAATATGGATATA ATACTTTAGCTCTGTGATTCTTGCACTGTTATTGCCAAAAGTAGATGAAACTTGAAATAACAGGCTGATTGTAGTAGTGT TTGTTCGATAGGTTTGGGGTATGAATTTGGTCTTGTATGCTATGCACAACTTAATAAACTTTGTTGATAGATGGGGCAAT TTTTTCCCTTTAAAAAGGATTAATTGCATTGAATTTAGTAATATTAAGAATAATTCTAAATCCTCTGACTTGTCTCCTAA TAATCCCCTCCTAATTACTAAATAAAGAAAGAATTTAATGATTTTTATGTTTTCAGAATATTAAGTACCCTTATTTTTTT CATTTATTATTTTCTTTATGAAGTATTAGATGATTTGTAGGAGGATATAACATTGCTTATTTATAGTTCTCCCTCATGTA GGGCAATGAAGAGACAGGCTGACATCAACATGAATGGTTTTTCCTCAATTTGTACATTCTTAGAGCTGATAATGTGGGAG TGGGAGTTTGATTTATACAAAGTTCTACACGTATGTGCCTGCATATCATTCGCAGTCCTGCAGTGGCTAAAATCCGTCAG TATTTGCCTGTTTGCCTCAGGTTTTTCATTTGAGTGGCACTTAATCTTTCACTGTTCTTTGAGATGGTATCTTTTAGAAT GCTAGCTGACTTCTGAGTAGCATGGACAAACACTCATCTGTATACTGTAGTCTGCCTTACATTGTAGTTCACCTGATTAC TGTAAATCCTTCATCATATTGTAACAGGAATAACTCCTTTCTTGTATTCACTATTGTGATATTGTTCCTTCCCGTGATTT TAATTTTGTTGCCTTCAATGCTGTGGGGGTAAACAGTAAATGTACCATGTTGATGTGATTATGATATGATAAGAAGCACA ATTTTGGTTATAACTTTCAAACTCGATCAGCTGTTATTTTCACCTTGTTCACTTCTCTCTTTTGTAAAAAAGTAGTAAAT TGCTATGCCTGTTTATTTTGATTATACATCCTAGAGTTGTATCCCCTTCAAATTCATAACATCATTATTTTGATAAATGT ACTGGAGCGAAAGCATTGCATCGTTCTAAGATCAGGGCATATTGCAAGTCTTAATAAAAATATATAACGAAGAAAATCAT GAT
CDS sequence (LotjaGi2g1v0206300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTCACCAACACCACTGGTAAACTCTCAGAATTATCTTTCAGTTCATCACCATCATCACTCTCACTCTCACTCAA CCTTCCTCGCTTTTTCACTCTCACCCATCTCTTCCTCCCTCATTCCAAACCCTCTTTTCGCACTCTCACCTTCTCTTCTC TCCGAACCAGCCACCACCACAATTCCTCCCCAAAACCCAACCCCACCGCGCCCTGGCTCGCCAAAACCGCCTCACCTCCC AAAAGGGTCTCCGAATCTGCCACCGAAGAAGACCCATCGAACCGTCAACCGGGTATTCGACAAAACCCGGTTGAAAGGAT TGTTCTCCGGTTGCGGAACCTGGGGTTGGTTTCTGATGAAGATGAGGAAGCAGCAGCAGCAGGAGGAGAAGAAGAAGGAG AAGATAGGGTCAGTCCATTGCCGGTGACCGGCGAGGAGAAGCTGGGGGAGTTGCTGAGGCGGGAATGGGTTCGTCCTGAT GCCGGGTTGCTGGAGGATGATGATGAGGGTGAGGAGGGGGTGTTGCCGTGGCAGAAAGAGGAAGAGGGGTTTGTGGGTAG TGGGGTTGAGGAGGGGTTGAGGAGGAGGATGTTAAGGGCTCCAAGTTTGGCTGAGTTGACACTTGAGGATGAGTTGTTGA GGAGGTTGAGGAGAGAGGGGATGCGTGTGAGGGAGAGGATTAGTATCCCCAAAGCTGGTCTCACAAAAGATGTGATGGAT AAGATTCACGAGAAGTGGAGGAAGGAGGAGTTGGTGAGGCTCAAGTTTCATGAGGAGCTTGCGCGGAACATGAAGATTGC TCATGAGATTGTTGAGCGTCGAACGGGAGGATTGGTTACATGGAGATCGGGAAGTATTATGATGGTGTATCGTGGTATTA ATTATCAAGGGCCTCCCTCCACGAAGGAACTTGATGAAAAAGAAGGTGATGGCTTTTTTATCCCGGATGTCTCATCAGGA AGCTTGCCAAGCACTAAAGACAGTAATGCAATTGCAAACTCATCCCTGGAGAAGAGTGAGCTAGCTGCAAGGAATCAGGA ACAGCCTAAGAACATGACGGAAGAGGAAGCAGAGTACAATGCGCTGCTTGATGGTTTGGGTCCTCGTTTTGTTGAATGGT GGGGTACAGGAGTACTTCCTGTCGATGCTGATTTACTTCCCCGTACAGTTCCTGGTTACAAAACACCTTTTAGGCTTCTT CCTGCAGGGATGCGTTCTCGACTAACAAATGCAGAGATGACCAATTTAAGAAAACTTGCAAAATCACTTCCTTGCCATTT TTCCTTGGGGAGAAATAGAAATCACCAAGGTCTGGCATGTGCTATTCTTAAGCTTTGGGAAAAAAGTTTACTTGCAAAGA TTGCTATCAAACGTGGTATCCAGAACACAAACAATAAATTAATGGCTGATGAGCTCAAGACATTAACAGGAGGCACCTTG CTGCTAAGGAATAAATATTACATTGTTATATATCGTGGGAAGGACTTTGTTCCAACAGATGTGGCTGCAGTTTTAGCTGA AAGACAGGAATTGACAAAACAGGTACAAGATGTTGAAGAGAAGGTGCGTTGCAGAGCTGTTGATGCAACATCAGGACAAG GTGAAGCAACAACACCGGCAGGCGCTGCAGTTTTAGCTGAAAGACAGGAGTTGACAGAACAGGTACAAGATGTTGAAGAG AAGGTGCATTGCAGAGCTGTTGATGCAACATCAGGACAAGGTGAATCAACAACACCGGCAGGCTCATTAGCAGAGTTTTA TGAGGCCAAGGCTCGTTGGGGAAGGGACATATCTACGGAAGAACGTGAGAAGATGAAGGAAGAAGTTGCCAATGCCAAGA CTGTGAAGCTTGTCAGGCATACTGAGCATAAGCTATCTCTTGCCCAGGCCAAAAAGCTTAGAGCAGAAAAGCTGTTAGCC AAAATAGAAGCAGCTATGGTTCCAGGTGGTCCTGATTATGACCAGGAAACCATCACAGAGGAAGAGCGTGTCGTGTTCCG TAGGATTGGTTTGAGAATGAAGGCATACTTACCACTTGGTATACGTGGTGTTTTTGATGGTGTCATTGAAAATATGCATT TGCATTGGAAACACAGGGAACTTGTAAAATTGATATCAAAACAAAAGACTCTGGCTTTTGTTGAAGACACAGCAAGGTTA CTGGAATATGAGAGTGGTGGAATACTAGTGGCAATAGAAAGAGTTTCTAAAGGATTTGCTCTTATTTATTATCGTGGAAA GAATTATAAACGGCCCATTACTCTCAGGCCTAGAAACCTTCTAACAAAGCAAAAGGCATTGAAGCGTTCCATAGCCATGC AACGCCATGAGGCTCTGAGTCAGCATATTACAGAACTGGAAAAAAATATAGACGAAATGAACAAAGAACTTGGCGTGTCT CAAGATTTGGAGGTTCAAGACAAGTGGAGCATGGAGGAAGAGGACAAAAAACAACTAGACCCCATCTCAGAACTCACCCA AAGTGAGGATGAGGATTCTGATGGTTTTGATGATGAGGAAGACTCCGATTGGGATGAAGATGAGGACGCTGAGTTTCCAG AATTCAACATTGATGGGCATCCTTGA
Protein sequence (LotjaGi2g1v0206300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFTNTTGKLSELSFSSSPSSLSLSLNLPRFFTLTHLFLPHSKPSFRTLTFSSLRTSHHHNSSPKPNPTAPWLAKTASPP KRVSESATEEDPSNRQPGIRQNPVERIVLRLRNLGLVSDEDEEAAAAGGEEEGEDRVSPLPVTGEEKLGELLRREWVRPD AGLLEDDDEGEEGVLPWQKEEEGFVGSGVEEGLRRRMLRAPSLAELTLEDELLRRLRREGMRVRERISIPKAGLTKDVMD KIHEKWRKEELVRLKFHEELARNMKIAHEIVERRTGGLVTWRSGSIMMVYRGINYQGPPSTKELDEKEGDGFFIPDVSSG SLPSTKDSNAIANSSLEKSELAARNQEQPKNMTEEEAEYNALLDGLGPRFVEWWGTGVLPVDADLLPRTVPGYKTPFRLL PAGMRSRLTNAEMTNLRKLAKSLPCHFSLGRNRNHQGLACAILKLWEKSLLAKIAIKRGIQNTNNKLMADELKTLTGGTL LLRNKYYIVIYRGKDFVPTDVAAVLAERQELTKQVQDVEEKVRCRAVDATSGQGEATTPAGAAVLAERQELTEQVQDVEE KVHCRAVDATSGQGESTTPAGSLAEFYEAKARWGRDISTEEREKMKEEVANAKTVKLVRHTEHKLSLAQAKKLRAEKLLA KIEAAMVPGGPDYDQETITEEERVVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARL LEYESGGILVAIERVSKGFALIYYRGKNYKRPITLRPRNLLTKQKALKRSIAMQRHEALSQHITELEKNIDEMNKELGVS QDLEVQDKWSMEEEDKKQLDPISELTQSEDEDSDGFDDEEDSDWDEDEDAEFPEFNIDGHP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 6 | 541 | 536 | 0.0 | – | |
| PANTHER | 6 | 541 | 536 | 0.0 | – | |
| MobiDBLite | 56 | 102 | 47 | - | – | |
| MobiDBLite | 120 | 141 | 22 | - | – | |
| ProSiteProfiles | 206 | 302 | 97 | 17.959 | ||
| Gene3D | 206 | 304 | 99 | 7.4E-9 | ||
| SUPERFAMILY | 207 | 298 | 92 | 5.1E-18 | ||
| SMART | 208 | 291 | 84 | 4.3E-11 | ||
| Pfam | 209 | 291 | 83 | 2.9E-23 | ||
| MobiDBLite | 334 | 354 | 21 | - | – | |
| MobiDBLite | 334 | 348 | 15 | - | – | |
| ProSiteProfiles | 406 | 503 | 98 | 15.711 | ||
| Pfam | 408 | 492 | 85 | 1.4E-11 | ||
| SUPERFAMILY | 408 | 498 | 91 | 4.19E-18 | ||
| SMART | 408 | 492 | 85 | 3.7E-16 | ||
| Coils | 501 | 521 | 21 | - | – | |
| PANTHER | 541 | 854 | 314 | 0.0 | – | |
| PANTHER | 541 | 854 | 314 | 0.0 | – | |
| Coils | 541 | 561 | 21 | - | – | |
| Coils | 595 | 615 | 21 | - | – | |
| Coils | 625 | 645 | 21 | - | – | |
| ProSiteProfiles | 656 | 756 | 101 | 18.44 | ||
| SUPERFAMILY | 657 | 755 | 99 | 1.44E-19 | ||
| SMART | 658 | 745 | 88 | 4.2E-15 | ||
| Pfam | 659 | 734 | 76 | 2.3E-13 | ||
| Coils | 776 | 803 | 28 | - | – | |
| MobiDBLite | 801 | 824 | 24 | - | – | |
| MobiDBLite | 801 | 861 | 61 | - | – | |
| MobiDBLite | 825 | 853 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi2g1v0206300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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