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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0207200 |
| Transcript ID | LotjaGi2g1v0207200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LC17|G7LC17_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi2g1v0207200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65111159..65119806) extracted from Lotus japonicus Gifu genome v1.2.
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGGCTGACTTCTGGAAATGTTGCTGGTGCTGT TGAGAATTGGGACATCGGTTCCTGTAATGACCCAATTCTCCAAAACTCTAGCATTGTATGGCCGGAATGTCCACCACGAC CTCTAGCACCACCACTGTTTATTACCATATACCAGTGAATCCAATGAATCACACTGTTACACGAAACAGACAAGACACAG GAAAATGTATAGAAATTTCGGGCTCCTGCAAGGCTGCAACACGTTGAGAGCATAACATTCATTTTCTTTTTATATACTTT GTTTGATTTTCTTGACTCACTCATACACACCATTCATATTCCACACTTATCATTCCAAGCCTTCTTTTCTCATGGCTTTC CTACCATCATCATCCTCCTCTTCCATCACCTATGCATTCACCTACGATGTGTTCATCAGCTTCAGGGGTTCTGATACCCG CTATGACTTTACCGGCAATCTCTACAAAGCTCTCTATGGTAAGGGAATTCACACTTTTATTGATGACAAGGAGCTTCACA AAGGGGACGAAATCACACCATTACTTGAGAAGGCCATTCAAAACTCCAGGATTTTCATCATTGTCCTCTCTAAGGACTAT GCATCTTCCTCGTTTTGCTTAGATGAACTTTCCAAGATTCTTGACTGCTCTCAGAAAGAGGGTCTTCTGGTTTGGCCAGT ATTTTATGATGTGGATCCTTCTGATGTGCGGAAGCAAACTGGGACGTTCGGAGAAGCAATGGCCCTGCATACGGAGATGT TCAAAGATAACAAGGACAAGTTGCAAAAATGGAGGATAGCTCTACAACAAGTAGCTAATTTGTCAGGCTGGCATTTCAAA CATGGGTGTGTTTCTTATACTGATTTCCTTGCGTTTTAGATATTGTCTAATTATTACAAAAATTTAGTTATAGTGAATAA GTAATAAAAAAAAGAACATGATGCACTATTATGACTTTACACAAACTTCACTTCTCTTATTGGACAGAGATGGATATGAA CACGAGTTTATCGGAAAGATTGTTAATGAAGTTTCAAGAAAGATTAATCGTGTTGCTTTACCTATTGCTGATTACCCGGT TGGACTAGAGTCCCAAGTGCGGCAAGTAGTTTCACTTTTGGATGTTGGGTCTATTAATAGAGTTCACATGGTAGGGATCC ATGGAATAGGGGGAATTGGTAAAACAACACTTGCTCTAGCAGTTTACAATTCCATTGCTGACCATTTTGAAGGTTTATGT TTTTTGGAGAATGTTAGAGAAAATTCAAACAAACATGGGCTACTACATCTCCAAAAGACCCTTCTTTTGGCTTTCTTGGA GAGAAGGAAATTGAGATAACAAGTGTCAAGCATGGAAGTTCAATAATACAACATCGGCTCCAACAAAAAAAGGTTCTTCT GATTCTAGATGATGTTGACAAGAAGGAGCAATTAAATAATATTATTGGAAGACCTAATTGGGTTGGTCCTGGTAGTAGAG TCATCATCACAACTCGAAACCAACAATTGCTAGCATGCCATGGGGTTGAAATAACATACAAAGTGGAAGAGTTGACGAAG GAAGATGCTACCAAATTGTTCACATGGAAAGCTTTTGAAAACCAGGAAGTTAATTCAAGTTATGAGGACTTATTGAACCA AGCATTGAGTTGTGCTTCCGGCCTTCCGTTAGCCTTGGAAGTAATAGGTTCTAACTTGTTTGGAAAAACAAGGGAAGAAT GGGTATCTGCATTAGAACAATATAGGAGGATTCCACTTGAAGATATCCAAAAGATACTTGAAGTGAGCTTTGATGCTTTG GAGGAAGAAGAGAAGAATGTTTTCCTAGACATTGCTTGTTGCTTCAAAGGATATGAATTGGGAGTGGTCAAGGACATACT TTGTGCTCATTATGGTTTCTGCATAGCAAATCACATTAAGGTGTTGGTTCAAAAGTCTCTCATAACGATTACTCCGCATT TGAGTAAATTGACACTACATGACTTAATTGAGGATATGGGTAAAGAAATCGTGCGACAAGAATCACCTAAAGATCCCGGA AGCCGCAGTAGGCTATGGTCTCTTGAAGATATATTTGAAGTTTTGGAAGAAAATACGGTAAGACTAGTTCGGATGATTTG GTTGTTTATCTTTAATCTTTATTTAGCCTTTTTGATTATTCAAAGCTACTAATGTTTATATTACCATTTTCCCTCTTTAT AATATTTTCAAGAACTTGTGTTAATGTCCTAACGTATATGTATTCATTTTGATTGATTTGTCTTTTTTTAAGGGAACAAG CAAAATTGAAATGATACATCTAGATCACCTATCATTTGAAAAAGTGGAATGGGATGGAGAGGCTTTCAAAGAGATGAAAA AACTCAAAACACTTATTATCAGAAACATCCATTTTTCTAAAGGTCCAGAGCATCTTCCAAATAGTTTAAGAGTACTAGAG TGGTGGAAATATCCTTCATCAGATTTACCAAGTGACTTTCATCCAAAGAAACTTTCCATATGCAAATTACCTGAGAGTAG CTTGGTGTCCTTGGAGTTGGGAAGATCATCAAAGGCAAGTATGATAATGATTTCATACACTTGATCTTCTTGTGTATGAT AACATCACTAATACTCATTTGATTCTTGTTTTTCTTTCTTTTCTTTTTTAGCAGAAGTTCGTGAGTATGAAAGTTTTAAA TCTCAATTTCTGTGAATCATTAACACAGATACCTAACTTATCCGGTCTCCCAAATTTAGAAGAGCTTTCATTTGAAGATT GTTTAAAATTAATTACTATTGACGGTTCGGTTGGGTTGTTGGCCAAACTTAAAAGCTTGAATGCTCGTCATTGCTCCCAG CTTAGGAGTTTTCCTCCCCTTAAGCTGCCCTCTCTTGAAGGACTCTATCTTAATGGTTGTTCAAGTCTTGAGAGTTTTCC AGAAATATTAGAAGAGATGGAAAATATAGAGTCCCTTGATTTGAGGGGCATTAACATAAGCAAATTTCCACATTCATTTG GAAATCTGACTCGACTTCGATTAATGTGGGTTTCTCACTTCCTGCCATCAAGGAGCTTAGACACGATGCCACAGCTATTA CGGCTCACAATCAGTCAGCAGGGGATATGGAAAGAGGATAGCGAGAGTGAGAGTGAAAAAGAGAGTTCCATGCTTTTTCC TTCAAACTAGAACATCTTACTCTCATACAGTGCGACGTGTTGTCAGATGAATATTTAGTATTAGTTCCCTCTTTGTTTCC TAACTTGAAACAATTACAGCTAATTGATTGTCCATCAATCACAACTGTACCTGAATGCATCAAAGAATGTCGCTTTTTAC GGAGGCTTACCTTGGAGGGATGCGAGCAACTTAGAGAAATTTTTGAAGGGATTTTGCCAAGATTAACTTACTTATATGTA AGAGGATGTCCATCGTTGAGTTCCAGTTGTAGAAGCATGTTGGTGAGGCAGGTTAGTTTTTGATTTGATTTGTTATGTTT AGAATGTATTTATTGATTTCATCATTATTTATTAATTAATGTTCTCCGCTTAAACAGGAACTGGGTGCGGATGTAGACAT TCTTCTTGAATTGCGAAACTTACAGATTCCAGAGTGGTTTGAGCACCAGAACAGGGGTCCATCTGCGTCACTTTCTTTCT GGTTTCGTAACGAATTCCCTGACATCTTACTATGTATTGCTTCTCCATCTTACTATGTACTCAGAGTAAATTCCTTCATC AATGGCTCTTCAGGTCAACAATTCATACTAAATTGGGGTTGTACTCTTCTTAAGAGGGTAAGCAAAACATGCACCGAAAA ATGCAGGATATCAAAAAATGAGTGGAATCATGTGGAGTTTAGGACTCAAAGGGGCTTTGATTGTGGAATTGGAATTCATG TATTCAAAGAGCAAAACATGCAGGATATACGATTCACGAATCCTTTAGACTTGAACTTGGCACCGCTTGAAGAGGAAGGT TAACAGCTGGATCTTGCCATTGTGTTTGGATGGTTGCTGTTGTTGCTACTTGTGCAACCCTATTCTTACCAGCCATCTTG AATTATGCAGCACATTAGTTAGAATCCATATTGCAGGTTCGTTGGATTCTTTCTTTAATTGCAAAAAATTAATTAAGTTT GCCTTTTTATAATGTCCTTGAATTTGAGTCACTTGTCATAAAATGGAATTATATAACCTCATTTTATAATTCAGGAAGGT TTCCAGAGTGGTTTGAGCACCAGAGAAGGGGTTCACTCTCTTTCTGGTTTTCCATCGTACACTGATTTTAACTCTGAATG GTCATTCTCAACCACTGATCTCATTTTAACTTCCTTTTTTCTCTTTCTGGTTTCTTGAACTTTTTCCTAGTTTAATGATT TTCATTCTTAGCATATACTTATGAACCAGTTTTTACAATGTCCACTATGAGAAGCCATGATTGGATTACCCCTGACTTAA AACATTCTATTCTATGTAAAAGGTCGCACATTCTTGAAGGATTTAGACCTCCCACTTCTTACTGCATACACCAAAGATTG TCCATTCTCGAGGGAACCTATTCAGATTTAATGAAAATCAACATGGATTGACATCTCCAATGACATAGGTACAATATATT TTATCCAACATGGATTGGAATGTTGGATATATTCTTTCCATTTTTATTATTGTTTCCTTAATTCCATTAAATTTGAAAGC AAGAAGAGAGCATGTTGTTAAGGTCTGATTTTAGTGAATTGCTATGTCACTGCTTTATATTGTGCATCATGTTCCCTTTT TCTGCATTTGTTCTGGGTGTCAAAGAAGGGTGATAGTAAAGTTGGCTTCTAAGAAGACTAATGACTTGCAATTATTAACT ATTGAATTCAGTTGAGTTATGGAAGGTCTTTCTTGGAGGGAAATTGGTAAATAATTCAGAAGACAAGTGAAGCACGTAAG GTTGAAAATTTGATCCCAGCAAATGCATTTGAAATTTTTAAAGTCTGAGGAGTCTGAAAAATAAATTAGGACTGATCTTT TACCACTATCACCATTGTGATCACCATTACCATGATAATAATGGCTGCATTCATTCTAAGTTGGTTCATTTCCACCAAAA AGCAGGGAGAGATACTGTTGCAGAAATAACCAGGCATAGATACTTAAACTTTGAGCTCTTTATTTCCAAGCATCACCTTA ATATTACAAGTACATGATAAATATATTGCAATAAGGATAAGGGTAGGAGAAGCTTAAATATCTAGATTGTGTGTCAAGAA GAAAAATGAAATGCTATAACTTCTTAGATAAAAGTTCAATTTCTGAAATTACTGTACTCCTTGCTGCTTATATCTCGTTT ATTTGCCATTTTAGGTTCTAGGAAATTCGTTTCTCCTTATGTCTAATAGATCCCTTGTACATGCAGAAGTGGTTTTATTA TAAAAAGATGATCGGTGCATTGAAATGTCTTGCGACTGTAACTGACTCTTTACTGGTTCTTGGATCTATTTGAAGTGGCA CCAACATTTAGCATCTATTACCACAGAATCTCGGAAAGGCTGCTTGTTTGGTGTGGTCTGAACTTTGAATTGAAAGTTGA AGGTATGTATTTCATAGAAGTAACTGAAATAGGATCACATTTGTTTGAGAATTCTAGCAGAAAAATTATTTTAGATTTGA TATAAGTGCAATCTAATATTGATTTGCAGTGCATATGTGGGAAGTTTATTCCTTAGGCAGTTCTGTAGATAATTTTTCCA AAATGGTATTGAGAAGCCCCACATTCACTAGAAATATGGTTAAGATAGTCTTTATATATGGGAAGACAATCCTTGAACTA ACTTTTTGGAATCAAAGCTTCTACCACTGAGTGGTTTGGACTTCGATCCTTGTTGCTCTCATTATTCTAATAAAAAGTGG AATTTTAGCACATAGTAGGTGGGTATGTGCATTTTCCACGCTTCAAGCCCAAGTGGGCTCTTGCGTGAGGGGGCGTGTTA GAAATATAATATAAAACTATTCAGAGGTTTTTGTCCAACAACTTAACCTTTTGAGATAATTGGTTGCTTGACAGTGTGAC AGCTATCTTAGTAGTTAGTAGTGTCTAATTAGTTATGGTTTTAAGTGTTATGAACCTGAGGCTTCACAGAATGTTGACTT AAACTATTCTTCAAGGCATTCTGATTCTTCAATATTGGTCCTTTATCTGAAAAAGGAAATTTAGTTCTCTAGTAAATAAC AAATGGACATTGTGAGATTTACACTTCAAGTTACAGGGAAAAGAATGGATAAGATTACTAAATCCCAATATTGGACATCA TTTGTGACACTAACTCAACATTTTATTTTATTTCAAGCAGAGAAGAAAAACAAATTTTCTTGAAAGAGTGTATAAGAACA CCTGATGCAGAAGCTACAACTTGAATGCTAAGATTTATGACACCAAAGCTAACTGAACCAGAGGCCAAAGGGCATGATGA CAAGGTGGAACTTATAAGCTTCTTTAATGAGAGAGGGGGCAACATAGCTTCAATTTTAACCATGTAACTGCTTGCTAATT TTTAAGCCCCATAATGTCATAATCCTCTTATTTCATGTTTGATTACTATAAATGTAGTGGAGATACACCGCATAGACATA GTAGAAGCCGATTTGTTACCCTGGTGCACAAATCGTGGTATGCAAAAATAGCATTATGGTTTATTAAAGACAAGTTATGG TCCAGCAGAGTTACTTGCAAATATTATAGCAAGGTGGTTCTGATTAGTTGTTCAAGAGCTTCCAGTATTATCTGGAGGAT AGGTTTTGATCACTCTGTTGTGGTTGAAGCAGAAGGCTTTGTGGGAGGTATCTGGATTCCCTGGGATGGTCAGGCTTTTA GATGTGGAGATTCATGCGAGGATTAAGGCCAAGGGATAGTTTGGCCTTTTTAAATGGAAACTTTGATATTCTATTGTTTT TTGAGCACTAAGACATGTTTATATAAGAAAGTGAACTCATACACAGTCGATCATTTTATGTACAATGGGGCTGCAATTCT CATTAATATTTCCAACAATTCTGATAAATTGTGATAAAAAAAAAATATGATTACATTGTCACCAATCTTATTTATTCTAT AAATATATGATAAAAAATTCAGCTAATTACTACTAAGCTTGGTTTCAATTTTCTTTGACCCTGACTCATTGGTCCCCTAG AGTTAAACTTCTACCTCCGCCCCCCGGCATAAAGTGAATGTTGCAATATTTTTATGATCTTCGATCGGTGAATTTAGCAA AGCACATTGTGTTTGTATTATTATGAAATTATGTTGGATTTGAATATTTGGACAAACTAAGTAAGGTTTGAAGTTTGTAT TTGGGGCTAAGCCCCTCATTTCAAAAAATAAAAACAAAGAAGTTTGTATTTGAATTTAGATATTTGCAAAAAAGTGAATC GTGCAATATCATTATCATCATGGAGAGTTGGATTCAGTAGATGCACTATATAAATTTGTTATAAGTGATATTTTATAACA GTTTCAATATTGCTTTTCTAATTTTCCCATTTTTTATTTTTTCTTAAAAACATGCGGTTGGTCGAGTCGGGTTAAACTTT TTCTAGCTCACCAAAAAGTGAGTCAGACTGATGATAAGTGTCATTTTTACATATATTTAGATATATATCTAGGCACTTCT TTAACTTATATGCTTACTTTATTCATCATTTTATCCCTCAAAGTATTTAATTTTGTAGATACTTAGTTTTAGCTTAAAAT AGTGTAAATATTATATATTTTGTGTGTTTAACTTGGAATTTTGATATAGGGAAGAAATTCATGAAGGAACCAACTTCCAA GTTCAAAGTGAAAATTTTCATTTTTAGAGAGGTTGAGGGCTGAGCACCAACCTGGGGTGCTAAGCATTCAAATGTGCTGA GAAAACCTTGTTTTGAAGTAAGCAGAGCGCAGAATGCCCAAAGGCAATGAAGAAGCCTTCACATTGAAGAAAGAGGGGCT CTAAGTGGCCACTTAGGGACATTGAGCATCGTTCGTCCGCCTCAAACACTTATTTAAGCCACACAAAAAATCAGATTTTT TAAGGATCTTCCCTCATTTTCTTCCCAAAACAGAGAGAGGGATCTGAGCATCACTCAAGGAGGATCCCTTGGCTAGGTTT GATGGATTGGGGCTTCAAGATATTGATGGTTGTCATGGGAGGACAGTGACAACCTCCCTGAAGTGATGGAAAGCTTGGGA GAGCTTCCATGTCCATGGTTACATTTTCTCATCTTTGATTTCAGCTCTTTTTTCTCTTTCCCTTGTATATGTTGCTTTCT ATTTTCTTGTTTCACTTTACAACTCATGGCTCTAACCAATCAATTGATAATCAAAAGAGTTTCACAGATAGATCGAGAGA TTGATATGAATTGGTGTATCCATTAATGTCTTAGGTCACTTCGTGTGTTAAATTTTTGCTTTGTGCACGTCAAGTATCAA TTATTTGTGTTAGATTTCTATGGACTAGCATGAAATTGAAAGATAATTGCGGGGAGAAACCACTCAATGAATTAGTTGTC TTAGGTTGAGACTATTTTGGGTATGAACAATAGTGGAATTCCATGTGGCAGGTGGGATTCTGAGTTTAACAAGAGTTTTC GGAGAGGC
CDS sequence (LotjaGi2g1v0207200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCCTACCATCATCATCCTCCTCTTCCATCACCTATGCATTCACCTACGATGTGTTCATCAGCTTCAGGGGTTC TGATACCCGCTATGACTTTACCGGCAATCTCTACAAAGCTCTCTATGGTAAGGGAATTCACACTTTTATTGATGACAAGG AGCTTCACAAAGGGGACGAAATCACACCATTACTTGAGAAGGCCATTCAAAACTCCAGGATTTTCATCATTGTCCTCTCT AAGGACTATGCATCTTCCTCGTTTTGCTTAGATGAACTTTCCAAGATTCTTGACTGCTCTCAGAAAGAGGGTCTTCTGGT TTGGCCAGTATTTTATGATGTGGATCCTTCTGATGTGCGGAAGCAAACTGGGACGTTCGGAGAAGCAATGGCCCTGCATA CGGAGATGTTCAAAGATAACAAGGACAAGTTGCAAAAATGGAGGATAGCTCTACAACAAGTAGCTAATTTGTCAGGCTGG CATTTCAAACATGGAGATGGATATGAACACGAGTTTATCGGAAAGATTGTTAATGAAGTTTCAAGAAAGATTAATCGTGT TGCTTTACCTATTGCTGATTACCCGGTTGGACTAGAGTCCCAAGTGCGGCAAGTAGTTTCACTTTTGGATGTTGGGTCTA TTAATAGAGTTCACATGGTAGGGATCCATGGAATAGGGGGAATTGGTAAAACAACACTTGCTCTAGCAGTTTACAATTCC ATTGCTGACCATTTTGAAGGTTTATGTTTTTTGGAGAATGTTAGAGAAAATTCAAACAAACATGGGCTACTACATCTCCA AAAGACCCTTCTTTTGGCTTTCTTGGAGAGAAGGAAATTGAGATAA
Protein sequence (LotjaGi2g1v0207200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFLPSSSSSSITYAFTYDVFISFRGSDTRYDFTGNLYKALYGKGIHTFIDDKELHKGDEITPLLEKAIQNSRIFIIVLS KDYASSSFCLDELSKILDCSQKEGLLVWPVFYDVDPSDVRKQTGTFGEAMALHTEMFKDNKDKLQKWRIALQQVANLSGW HFKHGDGYEHEFIGKIVNEVSRKINRVALPIADYPVGLESQVRQVVSLLDVGSINRVHMVGIHGIGGIGKTTLALAVYNS IADHFEGLCFLENVRENSNKHGLLHLQKTLLLAFLERRKLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 7 | 160 | 154 | 1.28E-43 | ||
| Gene3D | 13 | 187 | 175 | 7.2E-69 | ||
| PANTHER | 15 | 276 | 262 | 6.4E-112 | – | |
| PANTHER | 15 | 276 | 262 | 6.4E-112 | – | |
| ProSiteProfiles | 16 | 157 | 142 | 28.921 | ||
| SMART | 17 | 157 | 141 | 4.8E-44 | ||
| Pfam | 18 | 185 | 168 | 3.0E-44 | ||
| SUPERFAMILY | 185 | 276 | 92 | 1.71E-19 | ||
| Gene3D | 188 | 280 | 93 | 2.0E-15 | – | |
| Pfam | 199 | 251 | 53 | 6.7E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0207200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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