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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0297800 |
| Transcript ID | LotjaGi2g1v0297800.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Appr-1-P processing enzyme family protein; TAIR: AT1G69340.1 appr-1-p processing enzyme family protein; Swiss-Prot: sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog; TrEMBL-Plants: tr|A0A072UEM6|A0A072UEM6_MEDTR Appr-1-P processing enzyme family protein; Found in the gene: LotjaGi2g1v0297800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77242651..77249723) extracted from Lotus japonicus Gifu genome v1.2.
ATGTATAGGCCTGTGGCTGCAGCTTCAGCCACGCCGCGGGGTGGATTGCCGAATGACAGTGTGGACTCTGTTGTGACTCT AGATCAAGTGCCGCGGTGGATTGACGCTGAGCATTCGTTGGGGTATGATAATGGGGATTCGTCGTATCCTAGCTCGTATT TTCCCGATCCTTTGACGTTCCAATCGGGATCGGAGAGCGGCGGCAGTGGTTCGGTGTCGAGGTTTCCTGTTGACCATGAA GTTAATTCGAGGATATACTTGTGGAGGGGGACTCCGTGGAACCTTGAGGTGGATGCTGTGGTAAATTCTACAAATGAGGT GAATGATGCACTCACATTTAGTTATGTATGCGTTTTGTGGCTTTCTGTCTTTTCACTACAATGCGTTGTGCAAGCATAAC AGGACGCTAGGGCCTTGTGAAAGAACTTATGCTTACTTGATTATATGGTTCTATACTTGAAGACAATTGAAAATGAACGA ATTTAACAAATTAGAACTTTTTCCCAGTGTTTTGAAGTTAAAGCTTAACCTCCATTGTGTTGCACTGTTATGGGTTATTT TCTCCTCTTCAGAATTCAGATTGCTTTAGTATTTCTTGTATTCTTCATTGTTCTTTCTTTTATGAGATATTGATCCATAA GCTTTGCTAATTTTTTCCTCCTATAGAAGAAACAAATAGAACCTGTGGTAAAGGCACACCACCTTCATCATTATGCTGTC AATCCCACAACTAATCCTAGATTTCTATGTGATCCCTCCATGAGCTTGACGGGGGTGTGATTATAGGCATTACTGTATGA ACAATTAGACTTCGATAGATTGTTGTTAGTTAGTTGGGTTAGTTGGAGATTGACCAGTCAATTATGTAATCACATGGTTG CAACTTTGCAATGATTACTCGTAGGCAAGTGTACCTAATCGTTAATTCGTTATGTAGTAATCAAAGATTACCATCCTCAG AGATTGGATGTTAGATACCAATTTAATTATTTTAGCATTGAATGAACGGATCAAATGCTTGAATTGTTGGTATTTTGTCT TTAGCAGTAAATGACAAATAGCAATTAGAAGATGACTGTGTCAAACAAAAGAAAGACGTACCAGGGAGATGATTTCGTTA ACCTAATCACATGTTCTTACCCAGTCCATCTATATAAAAAATAATTCAATTCACCCAAGGTGCCAATTATAGCTATCCAC CCACTAATCCCTTAGTCAAGTGAGCCTATTAATTGAACTACTAGTATTAGTTCCTAGATAACCCAATCAATGCAGTAAAG AATCCAATTATCCAAAGAATTCACAATTAGATATTTCTCTTCCCTATGATGACAGAAATCCCAATTAATTCCCTTCCAAA TCCCCTAATCCACACTAATTGCTTTTCTGCGTGTCTATTTGTGACCTTTAAAACTGAGTTACATTCTCTTGGTTCTCAAC ATTTATCTTCCACCTCTGACCTGTACCTCTAGTAAATTAATGGCACTAATAAATCATATTTCTTATGAGTTTTTCATTTC CTGTCAACAGGTCTTGGATGAAGCACACAGCAGCCCTGGTTTGCATGCTGCTGCTGGACCTGGTCTTGCAGAAGAATGTG CCACTTTGGTATAGATTAATTGCTTAAGCAAAATGTATTGTTATGTGCTTGATGTTGATAATATTTGAGCTTGTATATTT GGTAATTGAGCTAAGATACTACCATGCCAGGGAAGCAGCTTTCTGGAAATGATGTATGAATATGGTAATATTATTGACAT CACTATCTTATTCTTGACAGGGTGGGTGTCGAACAGGGATGGCAAAAGCTACCAATGCATATGATCTTCCTGCAAGGTTC GTATATCCCCCTCCCCTTCCTATTTTTCTGAAGTAAAAAAGTAGTTGTCTCTATTTACTGTATAGGAAGAGATCGTGCGT TTACTTTTTCTGCCTTCTGTCTGTGAGAAAAGTCACTGCGAAGAGTATCTTTAAGCTAGTGCTTGTTGCATTGATGCAAA GGTGCATTGTCATGTTGTCTTTAATCTCTTCTGAATCGTGGTTGCGTTGACATGGATTTGTAGATTATTACATGTGCAAT TGTGGATGCATGTGTATAAATGTTAAACAGCTTACAGGTTGTTTACTCTTTTCCCGTGTTTTGCTCTGAAATCAGTTATT CATGTGTGGTGCTGTTCCAATCATGTTATGTTTTGACCCATATTTCTTCTTCCTTATTTGCATGCAACTCTCTTGACTAG AAGTTAGATTGCTAGAATTTGATTTTTGTTTTTGCCTTTATTAAATTTCCGCCAGGAAAGTTATCCATACTGTTGGCCCA AAGTATGCGGTGAAGTACCACACTGCTGCAGAGAATGCTTTAAGTCATTGCTATCGATCTTGCCTGGAGCTTCTAGTTGA AAATGGGCTTCGAAGGTTTTTGTTTCAAATGTTACATCATTATTTTCTTCAAGCTGTTTGTTAGGGCATCTCCTATGTCG CCTCAAATATCTAAAACGTGCTTTTTAAAAATGTATTGATGCAGCATTGCTATGGGCTGTATTTATACTGAAGCGAAGAA CTATCCCCGTGAACCAGCTGCACATGTAGCTATAAGTGAGATATTTTGTCTTCATATTTTTTCATTTTCTGCATTGATTC GAACCTGATAAATTTAATAGGTTAGCTTTATATATCTTGTAGAAATTAAACTGCCCAACTTTTGGTATATATTACTTCTG TTTTATCTATATGATAATGATAACTAGCAGTCATGATTGCCGAAAACCAGAAAAATAATATACTGACTTCATCTTAAATG GAAGGAAGGGAAATCTAATTGGGGGAAGCGGGAAGAGAGAAGATAGAATGACAAATCATGTTCTCACTTCTTCAAATGGT CAATCTGTTGTGATTTGCTTAATTTTACATCTTACTAACTGGTGTTTAGATTAAAGATGGAAGAGACGACAGGTCAGCAT AAGTAGGTAAATAGATGCATGTTTAGTTGCATCTTTTGGGTATAATTCTACCATTTTGTGCAGTTTCCAAAACCTTTATT CCATTCTATTCGACCCATCCCATCCCATCGAATTCCAATTCACTCATCGTTAGATATCCAAGCCTAGACTTACTCAAGGT ATTAGTCATGCACATGCTTAATACATCTATTATATGGTGTATGGTTATCTATGTCGTCAAGAACTGTTTTCTCATGCCTA ATGGATAAATATATTATTATTACGCTTCTTCACCTTGTAACGTTTTATGGTTTCTTCTTATGTCTTATTCAGGAACTGTC CGACGGTTTCTTGAGAAGCAGAAAGACAATATAACAGCTGTTGTCTTTTGCACTACCAGCACAGCTGATACTGAGATATA TAAAAGGTAAATTCTTTCTCTGTTGTTGTTAACTGCAATGTTTTAAACGAAATGAACTTCTAAAAAATTATGCTAGTTTG TTTTGTTTGCTTATCAATATTGAAATTTGTTTTACTTATTCATCCTTACCTTTTATATTGTTTCCATGTAGGTTGCTACC ACTTTACTTTCCTCGGGATAAACATGAAGAGGCAGTGGCTTTGTCAAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTG AGACCACCATAGATGAGCGTAAAATCAGAATCAAGCCTTTGCCTAAAAAAAATGTTCCAAAACCTCCTAAAGATCCAGTT GATCTTCCTGTTAGTGATGTTGGCATGGTTCGCAGGTCAGTCAATTTTATTTAGGATGATATTGGTAGGTATTAATATTT TCTTCTAGATTGCATGGTGTGTTCCACTTTGTCCAGATACTTGAATAGGTATTACCAATCTCACCATACACAAATAGTGG ACTTCACAAGATCTGATAATTTACTGTAGACTAAAATCTGTGTCCTTGAAATTTTCATTTATAATTACTTCAGTCCTTCA GATTTCATTTTCTTACTTTAGTCCATGATATTTATGAATTCACTTTAACTTAGTCCATGCATCAATATAATAGTTATCTG AGACTCGCTTGGAAAAGATGTTACTAATTGACTTGACAGTTTGACAAAATATATTGGGATAAGCCATTCAAAACCTCATT ATTTCATCTTCACATGCCATTTGAAACACAGGATGGGTTCTTTTATTATTGCTCTTTTTCTTTTCAAAATGGCAAGTGAA AAATGAAATTGTCTTGTTTGATTTATTTGTCCAGTCATCTCCAATCAAACTGTCATGTTTGCAGATATTGATGCCACAAC ATCTCTAAAAGTGGTAAATCAGCCTTTCTTGTTTATTAGATAACAGGTAGATAGTGGGGCTACATTAAAGTGAGTTCATA AATGTCGGTAACTATAGTGAAAAATAAAATGTCAAGGACTAAAGTGAGAATTTAAACAAAGGTCAGACCAGAATATGGTT TCTGTTACAACTTTACACTTCTACTCTGCTTCATCTTGTCAGCAAAATGTTCAGGGCTTGTTTGAAATTATTATCTGTTT TTTATTTTCAAAACTTTTTTTCAATGAAGTATTAAGAATTTACTTTGAGTAGAATTTTAGAAAACAAAACAAAAGTAAAA TTTGTTTGGATAAAAATAAGTTTCTAAAACAGTTTTAAAAGAATTATACATGAGATGTCGACATTGTAACAAGCTGCACG CCATATGAGATAAAAAAGGTGCTTTATTTCTAACAAGAATGCCATCAGACACAAAAACAAAAGAACGAAAACATGTATGA GCTGTTTCTGTTTTCTTGTTTTCAGAAATGGAGTTTTGGGAACAATTCTCAAAACAGATAAGCTAAAAACATTAATTAAA CATGTCTTTCTGTTCTTTTGTTTTCAATAGTCAAACAAGGCCTCATTTATCTGTTTGCCCAAACATTTCCTGATGCTCTC CTTGTAGTTTTATATTTGGATGCAACTGTATTAATTATCATTAGTTTTATTCTCTTGGAAGATTTTTCATCATTTTTACA ATTTGTACATGTGGAAATTTCCTGATTGATGTGGCTTTTATAGGACTTCATCATATTTAGATTCATTTCTGGATCCTGCC TTCATGTCCTTGATTAAAGACCCTGATGAAAGACGTCTGGAGCAGTGGGAGAAAACTGTCCAAGCACAAAGAGGCTGGAA CTTTGCTAAATTGCTTGGATTTGGTGACCTAGGTGCACCTGCATTATCTGCTGCCGAAGAGTATTCTCTGCACTCTAGAT ATCTTTCTAAAGCAAATTCCTTAAATCTTTCTGAAATTGCAGAGATGAAAATTGTGTAAGTGTCCATCTATTTAGTTACA CTGAAGTTTTATGTTCTTTAAAATTTTCTTATATTCATGCATTTCTTATCCTATCAAAATTGAAAGTTTCAGATATGCAT TCAGTTTGACACTAATATAAATTTATTTATGTTTTTCAGCTATCGTGGAGGGGTAGATAGTGAGGGTCGTCCTGTCATGG TTGTTGTGGGGGCTCACTTCTTGCTTAGATGTCTTGATCTGGAAAGATTTGTGCTTCATGTAGTGAAGGTGAGTCAGTTA TACTCTTCACCTTGACATATTTTAGTGTTGACAACTTAAGTATGGCTAAAGTAAATTTTCATCATCTACGTATCTTTAAT TTTTTTTCTCCCTTACCCTGTTCACTTCTCAAATATCTGAAAACTATCTTTGTGTCAAATTTCAGGAATTCGAGCCTATA ATACAAAAGCCTTATACTATTGTCTACTTCCACTCTGCTGCATCTCTGCAGATGTAAGTTTTAAATAATGGAGTTCCAGG ATTTACAGATTAGTTTATTCTTTTATGCTATAAAGGTATGAAATATGCTATGGGTTGTCTTAGAAAAATATTTGAATGTG TAAGAGGAGAATGTGCTAACTCTAGGCTATTAATTGGTGAACTAGTTGTTTTTAACAATCAGCCTATGGAAAATATGGCT GTCTTGCATAGTGTTTTATTTAATTGCCAAACATCTCACATTGTATCAGTAGTTCTTTTAGTAGTTGCTGGAAACATTTG CTTGGCAGTAGTTGGCTTAGTCATGTATTAGCTTGGAATCTTGAAGTTACTTAACTATATGTATTTCATCTAACTCTGTT GAGGTTGATTCTGCATTACATATCTCCATATTTAAATCAAGCAATCCTTTGGTTTGATGCATTGTGGCTTAGCTATATGC TGATGGCAGATTTGCCTGTCTAACTGATAGAGGTTTGTGAAACTGATGAAAATAAATAGTGAACGTCAACATTTTACTGT CTAATATAACTCATGTTAACTTCTAAAATTTTTAAAATGTTTTTTACAGTATGTGTTGTGTTATAGCCATGTCATGTCCT ATATTTTAACAATTTGTGTATCCCCATATCCGTGTCATATTATATCCGAGTCCCTTGTCATGTTCATGCTTTTTTAGATG AAAGCACACTTGAATTAAAGGAAAACATAGGAATAAACTGTTCCTTGAACATTGGTTAAGAATATTTTAGTTGAGCAGGT TGCTTCAAACTGTGATTATTTATAAGTAACTCCTATCTTTGGTTGCTCTAGATTTCTCTGCAATGCATAGTAGTATGGTT TCTTAACTATTGCTTTTAACCTTTGTCCACCATTTTGTATAAATAGGCAACCAGACCTAGGTTGGATGAAAAGATTGCAA CAAATACTTGGACGGAAGCACCAACGCAACCTGCATGTGTGAACTATTTCTGTTTTCCTGATGTATTGCTGTTACACATT TATATTATTTTCTCTGATTTCTTGGTCTGATATGCACAGGCAATATATGTCCTCCACCCAACTATTGGACTAAAAATGGC AGTATTTGCGCTTCAGTTGCTTGTGGACAATGCGGTATGTGAATATCAAGTTAGTTTTTAAAATTTTATTACCTGACTTA AACCTATTTAAGCACATCCTGTATTTGTTATTGTCATTGACGATTATCTTTTAGGTTTGGAAGAAAGTGGTTTATGTTGA TAGATTACTGCAGCTCTTCAGATACGTACCTCGTGAGCAGTTGACCATCCCAGATTTTGTATTCCAGTTGAGTCTTTAAG TTTTCATGTGTTGTCATCATTTGTTTTTCCTAA
CDS sequence (LotjaGi2g1v0297800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATAGGCCTGTGGCTGCAGCTTCAGCCACGCCGCGGGGTGGATTGCCGAATGACAGTGTGGACTCTGTTGTGACTCT AGATCAAGTGCCGCGGTGGATTGACGCTGAGCATTCGTTGGGGTATGATAATGGGGATTCGTCGTATCCTAGCTCGTATT TTCCCGATCCTTTGACGTTCCAATCGGGATCGGAGAGCGGCGGCAGTGGTTCGGTGTCGAGGTTTCCTGTTGACCATGAA GTTAATTCGAGGATATACTTGTGGAGGGGGACTCCGTGGAACCTTGAGGTGGATGCTGTGGTAAATTCTACAAATGAGGT CTTGGATGAAGCACACAGCAGCCCTGGTTTGCATGCTGCTGCTGGACCTGGTCTTGCAGAAGAATGTGCCACTTTGGGTG GGTGTCGAACAGGGATGGCAAAAGCTACCAATGCATATGATCTTCCTGCAAGGAAAGTTATCCATACTGTTGGCCCAAAG TATGCGGTGAAGTACCACACTGCTGCAGAGAATGCTTTAAGTCATTGCTATCGCATTGCTATGGGCTGTATTTATACTGA AGCGAAGAACTATCCCCGTGAACCAGCTGCACATGTAGCTATAAGAACTGTCCGACGGTTTCTTGAGAAGCAGAAAGACA ATATAACAGCTGTTGTCTTTTGCACTACCAGCACAGCTGATACTGAGATATATAAAAGGTTGCTACCACTTTACTTTCCT CGGGATAAACATGAAGAGGCAGTGGCTTTGTCAAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTGAGACCACCATAGA TGAGCGTAAAATCAGAATCAAGCCTTTGCCTAAAAAAAATGTTCCAAAACCTCCTAAAGATCCAGTTGATCTTCCTGTTA GTGATGTTGGCATGGTTCGCAGGACTTCATCATATTTAGATTCATTTCTGGATCCTGCCTTCATGTCCTTGATTAAAGAC CCTGATGAAAGACGTCTGGAGCAGTGGGAGAAAACTGTCCAAGCACAAAGAGGCTGGAACTTTGCTAAATTGCTTGGATT TGGTGACCTAGGTGCACCTGCATTATCTGCTGCCGAAGAGTATTCTCTGCACTCTAGATATCTTTCTAAAGCAAATTCCT TAAATCTTTCTGAAATTGCAGAGATGAAAATTGTCTATCGTGGAGGGGTAGATAGTGAGGGTCGTCCTGTCATGGTTGTT GTGGGGGCTCACTTCTTGCTTAGATGTCTTGATCTGGAAAGATTTGTGCTTCATGTAGTGAAGGAATTCGAGCCTATAAT ACAAAAGCCTTATACTATTGTCTACTTCCACTCTGCTGCATCTCTGCAGATGCAACCAGACCTAGGTTGGATGAAAAGAT TGCAACAAATACTTGGACGGAAGCACCAACGCAACCTGCATGCAATATATGTCCTCCACCCAACTATTGGACTAAAAATG GCAGTATTTGCGCTTCAGTTGCTTGTGGACAATGCGGTTTGGAAGAAAGTGGTTTATGTTGATAGATTACTGCAGCTCTT CAGATACGTACCTCGTGAGCAGTTGACCATCCCAGATTTTGTATTCCAGTTGAGTCTTTAA
Protein sequence (LotjaGi2g1v0297800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYRPVAAASATPRGGLPNDSVDSVVTLDQVPRWIDAEHSLGYDNGDSSYPSSYFPDPLTFQSGSESGGSGSVSRFPVDHE VNSRIYLWRGTPWNLEVDAVVNSTNEVLDEAHSSPGLHAAAGPGLAEECATLGGCRTGMAKATNAYDLPARKVIHTVGPK YAVKYHTAAENALSHCYRIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNITAVVFCTTSTADTEIYKRLLPLYFP RDKHEEAVALSKLPADVGDENGETTIDERKIRIKPLPKKNVPKPPKDPVDLPVSDVGMVRRTSSYLDSFLDPAFMSLIKD PDERRLEQWEKTVQAQRGWNFAKLLGFGDLGAPALSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVV VGAHFLLRCLDLERFVLHVVKEFEPIIQKPYTIVYFHSAASLQMQPDLGWMKRLQQILGRKHQRNLHAIYVLHPTIGLKM AVFALQLLVDNAVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQLSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 2 | 525 | 524 | 0.0 | – | |
| PANTHER | 2 | 525 | 524 | 0.0 | – | |
| MobiDBLite | 53 | 71 | 19 | - | – | |
| MobiDBLite | 53 | 74 | 22 | - | – | |
| Gene3D | 55 | 244 | 190 | 6.1E-56 | ||
| SUPERFAMILY | 71 | 268 | 198 | 7.06E-39 | ||
| ProSiteProfiles | 72 | 239 | 168 | 16.604 | ||
| CDD | 83 | 208 | 126 | 1.08167E-74 | ||
| Pfam | 101 | 183 | 83 | 3.7E-15 | ||
| MobiDBLite | 259 | 293 | 35 | - | – | |
| MobiDBLite | 262 | 285 | 24 | - | – | |
| ProSiteProfiles | 372 | 526 | 155 | 8.215 | ||
| Gene3D | 375 | 517 | 143 | 1.4E-39 | ||
| SUPERFAMILY | 376 | 515 | 140 | 2.22E-16 | ||
| SMART | 378 | 524 | 147 | 5.9E-7 | ||
| CDD | 382 | 518 | 137 | 1.13588E-23 | ||
| Pfam | 394 | 523 | 130 | 6.1E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0297800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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