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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0297800 |
| Transcript ID | LotjaGi2g1v0297800.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Appr-1-P processing enzyme family protein; TAIR: AT1G69340.1 appr-1-p processing enzyme family protein; Swiss-Prot: sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog; TrEMBL-Plants: tr|V7CH06|V7CH06_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0297800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77242651..77249881) extracted from Lotus japonicus Gifu genome v1.2.
ATGTATAGGCCTGTGGCTGCAGCTTCAGCCACGCCGCGGGGTGGATTGCCGAATGACAGTGTGGACTCTGTTGTGACTCT AGATCAAGTGCCGCGGTGGATTGACGCTGAGCATTCGTTGGGGTATGATAATGGGGATTCGTCGTATCCTAGCTCGTATT TTCCCGATCCTTTGACGTTCCAATCGGGATCGGAGAGCGGCGGCAGTGGTTCGGTGTCGAGGTTTCCTGTTGACCATGAA GTTAATTCGAGGATATACTTGTGGAGGGGGACTCCGTGGAACCTTGAGGTGGATGCTGTGGTAAATTCTACAAATGAGGT GAATGATGCACTCACATTTAGTTATGTATGCGTTTTGTGGCTTTCTGTCTTTTCACTACAATGCGTTGTGCAAGCATAAC AGGACGCTAGGGCCTTGTGAAAGAACTTATGCTTACTTGATTATATGGTTCTATACTTGAAGACAATTGAAAATGAACGA ATTTAACAAATTAGAACTTTTTCCCAGTGTTTTGAAGTTAAAGCTTAACCTCCATTGTGTTGCACTGTTATGGGTTATTT TCTCCTCTTCAGAATTCAGATTGCTTTAGTATTTCTTGTATTCTTCATTGTTCTTTCTTTTATGAGATATTGATCCATAA GCTTTGCTAATTTTTTCCTCCTATAGAAGAAACAAATAGAACCTGTGGTAAAGGCACACCACCTTCATCATTATGCTGTC AATCCCACAACTAATCCTAGATTTCTATGTGATCCCTCCATGAGCTTGACGGGGGTGTGATTATAGGCATTACTGTATGA ACAATTAGACTTCGATAGATTGTTGTTAGTTAGTTGGGTTAGTTGGAGATTGACCAGTCAATTATGTAATCACATGGTTG CAACTTTGCAATGATTACTCGTAGGCAAGTGTACCTAATCGTTAATTCGTTATGTAGTAATCAAAGATTACCATCCTCAG AGATTGGATGTTAGATACCAATTTAATTATTTTAGCATTGAATGAACGGATCAAATGCTTGAATTGTTGGTATTTTGTCT TTAGCAGTAAATGACAAATAGCAATTAGAAGATGACTGTGTCAAACAAAAGAAAGACGTACCAGGGAGATGATTTCGTTA ACCTAATCACATGTTCTTACCCAGTCCATCTATATAAAAAATAATTCAATTCACCCAAGGTGCCAATTATAGCTATCCAC CCACTAATCCCTTAGTCAAGTGAGCCTATTAATTGAACTACTAGTATTAGTTCCTAGATAACCCAATCAATGCAGTAAAG AATCCAATTATCCAAAGAATTCACAATTAGATATTTCTCTTCCCTATGATGACAGAAATCCCAATTAATTCCCTTCCAAA TCCCCTAATCCACACTAATTGCTTTTCTGCGTGTCTATTTGTGACCTTTAAAACTGAGTTACATTCTCTTGGTTCTCAAC ATTTATCTTCCACCTCTGACCTGTACCTCTAGTAAATTAATGGCACTAATAAATCATATTTCTTATGAGTTTTTCATTTC CTGTCAACAGGTCTTGGATGAAGCACACAGCAGCCCTGGTTTGCATGCTGCTGCTGGACCTGGTCTTGCAGAAGAATGTG CCACTTTGGTATAGATTAATTGCTTAAGCAAAATGTATTGTTATGTGCTTGATGTTGATAATATTTGAGCTTGTATATTT GGTAATTGAGCTAAGATACTACCATGCCAGGGAAGCAGCTTTCTGGAAATGATGTATGAATATGGTAATATTATTGACAT CACTATCTTATTCTTGACAGGGTGGGTGTCGAACAGGGATGGCAAAAGCTACCAATGCATATGATCTTCCTGCAAGGTTC GTATATCCCCCTCCCCTTCCTATTTTTCTGAAGTAAAAAAGTAGTTGTCTCTATTTACTGTATAGGAAGAGATCGTGCGT TTACTTTTTCTGCCTTCTGTCTGTGAGAAAAGTCACTGCGAAGAGTATCTTTAAGCTAGTGCTTGTTGCATTGATGCAAA GGTGCATTGTCATGTTGTCTTTAATCTCTTCTGAATCGTGGTTGCGTTGACATGGATTTGTAGATTATTACATGTGCAAT TGTGGATGCATGTGTATAAATGTTAAACAGCTTACAGGTTGTTTACTCTTTTCCCGTGTTTTGCTCTGAAATCAGTTATT CATGTGTGGTGCTGTTCCAATCATGTTATGTTTTGACCCATATTTCTTCTTCCTTATTTGCATGCAACTCTCTTGACTAG AAGTTAGATTGCTAGAATTTGATTTTTGTTTTTGCCTTTATTAAATTTCCGCCAGGAAAGTTATCCATACTGTTGGCCCA AAGTATGCGGTGAAGTACCACACTGCTGCAGAGAATGCTTTAAGTCATTGCTATCGATCTTGCCTGGAGCTTCTAGTTGA AAATGGGCTTCGAAGGTTTTTGTTTCAAATGTTACATCATTATTTTCTTCAAGCTGTTTGTTAGGGCATCTCCTATGTCG CCTCAAATATCTAAAACGTGCTTTTTAAAAATGTATTGATGCAGCATTGCTATGGGCTGTATTTATACTGAAGCGAAGAA CTATCCCCGTGAACCAGCTGCACATGTAGCTATAAGTGAGATATTTTGTCTTCATATTTTTTCATTTTCTGCATTGATTC GAACCTGATAAATTTAATAGGTTAGCTTTATATATCTTGTAGAAATTAAACTGCCCAACTTTTGGTATATATTACTTCTG TTTTATCTATATGATAATGATAACTAGCAGTCATGATTGCCGAAAACCAGAAAAATAATATACTGACTTCATCTTAAATG GAAGGAAGGGAAATCTAATTGGGGGAAGCGGGAAGAGAGAAGATAGAATGACAAATCATGTTCTCACTTCTTCAAATGGT CAATCTGTTGTGATTTGCTTAATTTTACATCTTACTAACTGGTGTTTAGATTAAAGATGGAAGAGACGACAGGTCAGCAT AAGTAGGTAAATAGATGCATGTTTAGTTGCATCTTTTGGGTATAATTCTACCATTTTGTGCAGTTTCCAAAACCTTTATT CCATTCTATTCGACCCATCCCATCCCATCGAATTCCAATTCACTCATCGTTAGATATCCAAGCCTAGACTTACTCAAGGT ATTAGTCATGCACATGCTTAATACATCTATTATATGGTGTATGGTTATCTATGTCGTCAAGAACTGTTTTCTCATGCCTA ATGGATAAATATATTATTATTACGCTTCTTCACCTTGTAACGTTTTATGGTTTCTTCTTATGTCTTATTCAGGAACTGTC CGACGGTTTCTTGAGAAGCAGAAAGACAATATAACAGCTGTTGTCTTTTGCACTACCAGCACAGCTGATACTGAGATATA TAAAAGGTAAATTCTTTCTCTGTTGTTGTTAACTGCAATGTTTTAAACGAAATGAACTTCTAAAAAATTATGCTAGTTTG TTTTGTTTGCTTATCAATATTGAAATTTGTTTTACTTATTCATCCTTACCTTTTATATTGTTTCCATGTAGGTTGCTACC ACTTTACTTTCCTCGGGATAAACATGAAGAGGCAGTGGCTTTGTCAAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTG AGACCACCATAGATGAGCGTAAAATCAGAATCAAGCCTTTGCCTAAAAAAAATGTTCCAAAACCTCCTAAAGATCCAGTT GATCTTCCTGTTAGTGATGTTGGCATGGTTCGCAGGTCAGTCAATTTTATTTAGGATGATATTGGTAGGTATTAATATTT TCTTCTAGATTGCATGGTGTGTTCCACTTTGTCCAGATACTTGAATAGGTATTACCAATCTCACCATACACAAATAGTGG ACTTCACAAGATCTGATAATTTACTGTAGACTAAAATCTGTGTCCTTGAAATTTTCATTTATAATTACTTCAGTCCTTCA GATTTCATTTTCTTACTTTAGTCCATGATATTTATGAATTCACTTTAACTTAGTCCATGCATCAATATAATAGTTATCTG AGACTCGCTTGGAAAAGATGTTACTAATTGACTTGACAGTTTGACAAAATATATTGGGATAAGCCATTCAAAACCTCATT ATTTCATCTTCACATGCCATTTGAAACACAGGATGGGTTCTTTTATTATTGCTCTTTTTCTTTTCAAAATGGCAAGTGAA AAATGAAATTGTCTTGTTTGATTTATTTGTCCAGTCATCTCCAATCAAACTGTCATGTTTGCAGATATTGATGCCACAAC ATCTCTAAAAGTGGTAAATCAGCCTTTCTTGTTTATTAGATAACAGGTAGATAGTGGGGCTACATTAAAGTGAGTTCATA AATGTCGGTAACTATAGTGAAAAATAAAATGTCAAGGACTAAAGTGAGAATTTAAACAAAGGTCAGACCAGAATATGGTT TCTGTTACAACTTTACACTTCTACTCTGCTTCATCTTGTCAGCAAAATGTTCAGGGCTTGTTTGAAATTATTATCTGTTT TTTATTTTCAAAACTTTTTTTCAATGAAGTATTAAGAATTTACTTTGAGTAGAATTTTAGAAAACAAAACAAAAGTAAAA TTTGTTTGGATAAAAATAAGTTTCTAAAACAGTTTTAAAAGAATTATACATGAGATGTCGACATTGTAACAAGCTGCACG CCATATGAGATAAAAAAGGTGCTTTATTTCTAACAAGAATGCCATCAGACACAAAAACAAAAGAACGAAAACATGTATGA GCTGTTTCTGTTTTCTTGTTTTCAGAAATGGAGTTTTGGGAACAATTCTCAAAACAGATAAGCTAAAAACATTAATTAAA CATGTCTTTCTGTTCTTTTGTTTTCAATAGTCAAACAAGGCCTCATTTATCTGTTTGCCCAAACATTTCCTGATGCTCTC CTTGTAGTTTTATATTTGGATGCAACTGTATTAATTATCATTAGTTTTATTCTCTTGGAAGATTTTTCATCATTTTTACA ATTTGTACATGTGGAAATTTCCTGATTGATGTGGCTTTTATAGGACTTCATCATATTTAGATTCATTTCTGGATCCTGCC TTCATGTCCTTGATTAAAGACCCTGATGAAAGACGTCTGGAGCAGTGGGAGAAAACTGTCCAAGCACAAAGAGGCTGGAA CTTTGCTAAATTGCTTGGATTTGGTGACCTAGGTGCACCTGCATTATCTGCTGCCGAAGAGTATTCTCTGCACTCTAGAT ATCTTTCTAAAGCAAATTCCTTAAATCTTTCTGAAATTGCAGAGATGAAAATTGTGTAAGTGTCCATCTATTTAGTTACA CTGAAGTTTTATGTTCTTTAAAATTTTCTTATATTCATGCATTTCTTATCCTATCAAAATTGAAAGTTTCAGATATGCAT TCAGTTTGACACTAATATAAATTTATTTATGTTTTTCAGCTATCGTGGAGGGGTAGATAGTGAGGGTCGTCCTGTCATGG TTGTTGTGGGGGCTCACTTCTTGCTTAGATGTCTTGATCTGGAAAGATTTGTGCTTCATGTAGTGAAGGTGAGTCAGTTA TACTCTTCACCTTGACATATTTTAGTGTTGACAACTTAAGTATGGCTAAAGTAAATTTTCATCATCTACGTATCTTTAAT TTTTTTTCTCCCTTACCCTGTTCACTTCTCAAATATCTGAAAACTATCTTTGTGTCAAATTTCAGGAATTCGAGCCTATA ATACAAAAGCCTTATACTATTGTCTACTTCCACTCTGCTGCATCTCTGCAGATGTAAGTTTTAAATAATGGAGTTCCAGG ATTTACAGATTAGTTTATTCTTTTATGCTATAAAGGTATGAAATATGCTATGGGTTGTCTTAGAAAAATATTTGAATGTG TAAGAGGAGAATGTGCTAACTCTAGGCTATTAATTGGTGAACTAGTTGTTTTTAACAATCAGCCTATGGAAAATATGGCT GTCTTGCATAGTGTTTTATTTAATTGCCAAACATCTCACATTGTATCAGTAGTTCTTTTAGTAGTTGCTGGAAACATTTG CTTGGCAGTAGTTGGCTTAGTCATGTATTAGCTTGGAATCTTGAAGTTACTTAACTATATGTATTTCATCTAACTCTGTT GAGGTTGATTCTGCATTACATATCTCCATATTTAAATCAAGCAATCCTTTGGTTTGATGCATTGTGGCTTAGCTATATGC TGATGGCAGATTTGCCTGTCTAACTGATAGAGGTTTGTGAAACTGATGAAAATAAATAGTGAACGTCAACATTTTACTGT CTAATATAACTCATGTTAACTTCTAAAATTTTTAAAATGTTTTTTACAGTATGTGTTGTGTTATAGCCATGTCATGTCCT ATATTTTAACAATTTGTGTATCCCCATATCCGTGTCATATTATATCCGAGTCCCTTGTCATGTTCATGCTTTTTTAGATG AAAGCACACTTGAATTAAAGGAAAACATAGGAATAAACTGTTCCTTGAACATTGGTTAAGAATATTTTAGTTGAGCAGGT TGCTTCAAACTGTGATTATTTATAAGTAACTCCTATCTTTGGTTGCTCTAGATTTCTCTGCAATGCATAGTAGTATGGTT TCTTAACTATTGCTTTTAACCTTTGTCCACCATTTTGTATAAATAGGCAACCAGACCTAGGTTGGATGAAAAGATTGCAA CAAATACTTGGACGGAAGCACCAACGCAACCTGCATGTGTGAACTATTTCTGTTTTCCTGATGTATTGCTGTTACACATT TATATTATTTTCTCTGATTTCTTGGTCTGATATGCACAGGCAATATATGTCCTCCACCCAACTATTGGACTAAAAATGGC AGTATTTGCGCTTCAGTTGCTTGTGGACAATGCGGTATGTGAATATCAAGTTAGTTTTTAAAATTTTATTACCTGACTTA AACCTATTTAAGCACATCCTGTATTTGTTATTGTCATTGACGATTATCTTTTAGGTTTGGAAGAAAGTGGTTTATGTTGA TAGATTACTGCAGCTCTTCAGATACGTACCTCGTGAGCAGTTGACCATCCCAGATTTTGTATTCCAGTTGAGTCTTTAAG TTTTCATGTGTTGTCATCATTTGTTTTTCCTAATGTTATTCCATAAAACATTTCATTCGATTTCTGAATGTATTTTAGAT TCTATGTTATGATTTTTCTTCTTTTATTCTGATAGGCATGACTTAGAAGTGAATGGAGGAAAGGGTCTTATTGTTGATCC CAGAACAAAATACGTTTACCACAGACCATGA
CDS sequence (LotjaGi2g1v0297800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATAGGCCTGTGGCTGCAGCTTCAGCCACGCCGCGGGGTGGATTGCCGAATGACAGTGTGGACTCTGTTGTGACTCT AGATCAAGTGCCGCGGTGGATTGACGCTGAGCATTCGTTGGGGTATGATAATGGGGATTCGTCGTATCCTAGCTCGTATT TTCCCGATCCTTTGACGTTCCAATCGGGATCGGAGAGCGGCGGCAGTGGTTCGGTGTCGAGGTTTCCTGTTGACCATGAA GTTAATTCGAGGATATACTTGTGGAGGGGGACTCCGTGGAACCTTGAGGTGGATGCTGTGGTAAATTCTACAAATGAGGT CTTGGATGAAGCACACAGCAGCCCTGGTTTGCATGCTGCTGCTGGACCTGGTCTTGCAGAAGAATGTGCCACTTTGGGTG GGTGTCGAACAGGGATGGCAAAAGCTACCAATGCATATGATCTTCCTGCAAGGAAAGTTATCCATACTGTTGGCCCAAAG TATGCGGTGAAGTACCACACTGCTGCAGAGAATGCTTTAAGTCATTGCTATCGATCTTGCCTGGAGCTTCTAGTTGAAAA TGGGCTTCGAAGCATTGCTATGGGCTGTATTTATACTGAAGCGAAGAACTATCCCCGTGAACCAGCTGCACATGTAGCTA TAAGAACTGTCCGACGGTTTCTTGAGAAGCAGAAAGACAATATAACAGCTGTTGTCTTTTGCACTACCAGCACAGCTGAT ACTGAGATATATAAAAGGTTGCTACCACTTTACTTTCCTCGGGATAAACATGAAGAGGCAGTGGCTTTGTCAAAGCTTCC TGCAGATGTTGGGGATGAGAATGGTGAGACCACCATAGATGAGCGTAAAATCAGAATCAAGCCTTTGCCTAAAAAAAATG TTCCAAAACCTCCTAAAGATCCAGTTGATCTTCCTGTTAGTGATGTTGGCATGGTTCGCAGGACTTCATCATATTTAGAT TCATTTCTGGATCCTGCCTTCATGTCCTTGATTAAAGACCCTGATGAAAGACGTCTGGAGCAGTGGGAGAAAACTGTCCA AGCACAAAGAGGCTGGAACTTTGCTAAATTGCTTGGATTTGGTGACCTAGGTGCACCTGCATTATCTGCTGCCGAAGAGT ATTCTCTGCACTCTAGATATCTTTCTAAAGCAAATTCCTTAAATCTTTCTGAAATTGCAGAGATGAAAATTGTCTATCGT GGAGGGGTAGATAGTGAGGGTCGTCCTGTCATGGTTGTTGTGGGGGCTCACTTCTTGCTTAGATGTCTTGATCTGGAAAG ATTTGTGCTTCATGTAGTGAAGGAATTCGAGCCTATAATACAAAAGCCTTATACTATTGTCTACTTCCACTCTGCTGCAT CTCTGCAGATGCAACCAGACCTAGGTTGGATGAAAAGATTGCAACAAATACTTGGACGGAAGCACCAACGCAACCTGCAT GCAATATATGTCCTCCACCCAACTATTGGACTAAAAATGGCAGTATTTGCGCTTCAGTTGCTTGTGGACAATGCGAAAGT GGTTTATGTTGATAGATTACTGCAGCTCTTCAGATACGTACCTCGTGAGCAGTTGACCATCCCAGATTTTGTATTCCAGC ATGACTTAGAAGTGAATGGAGGAAAGGGTCTTATTGTTGATCCCAGAACAAAATACGTTTACCACAGACCATGA
Protein sequence (LotjaGi2g1v0297800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYRPVAAASATPRGGLPNDSVDSVVTLDQVPRWIDAEHSLGYDNGDSSYPSSYFPDPLTFQSGSESGGSGSVSRFPVDHE VNSRIYLWRGTPWNLEVDAVVNSTNEVLDEAHSSPGLHAAAGPGLAEECATLGGCRTGMAKATNAYDLPARKVIHTVGPK YAVKYHTAAENALSHCYRSCLELLVENGLRSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNITAVVFCTTSTAD TEIYKRLLPLYFPRDKHEEAVALSKLPADVGDENGETTIDERKIRIKPLPKKNVPKPPKDPVDLPVSDVGMVRRTSSYLD SFLDPAFMSLIKDPDERRLEQWEKTVQAQRGWNFAKLLGFGDLGAPALSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYR GGVDSEGRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPIIQKPYTIVYFHSAASLQMQPDLGWMKRLQQILGRKHQRNLH AIYVLHPTIGLKMAVFALQLLVDNAKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 2 | 557 | 556 | 0.0 | – | |
| PANTHER | 2 | 557 | 556 | 0.0 | – | |
| Gene3D | 23 | 257 | 235 | 1.5E-68 | ||
| MobiDBLite | 53 | 71 | 19 | - | – | |
| MobiDBLite | 53 | 74 | 22 | - | – | |
| SUPERFAMILY | 71 | 281 | 211 | 5.1E-47 | ||
| ProSiteProfiles | 72 | 252 | 181 | 21.205 | ||
| CDD | 83 | 221 | 139 | 1.38277E-84 | ||
| SMART | 84 | 213 | 130 | 1.1E-7 | ||
| Pfam | 101 | 213 | 113 | 1.8E-25 | ||
| MobiDBLite | 272 | 306 | 35 | - | – | |
| MobiDBLite | 275 | 298 | 24 | - | – | |
| SUPERFAMILY | 389 | 525 | 137 | 4.19E-13 | ||
| Gene3D | 390 | 539 | 150 | 3.0E-37 | ||
| SMART | 391 | 534 | 144 | 1.1E-4 | ||
| CDD | 395 | 528 | 134 | 4.65707E-21 | ||
| Pfam | 407 | 535 | 129 | 2.3E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0297800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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