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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0313100 |
| Transcript ID | LotjaGi2g1v0313100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|A0A1J7GFD2|A0A1J7GFD2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0313100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78791429..78794697) extracted from Lotus japonicus Gifu genome v1.2.
AGCAAAAGAGAAAGAGCACAACAGCATATCTGGTTCTAGAAACAACTGCTCATAGAAACTTCTCCTTAGGATTTATTTTG ACTTTAGAATCAATTATAAATGAATTACCAAACATGTTAGTAGTTTAATCTTTGGTCTGCTTTCATGGCTTTGAATGTGA TGCTTTTTCTGAGCAGCCTTATTGTTTTACACAGTTTTCTAACACCAACTTGCCATTGCCAGACCTGTTCTCCTCAGAAC ATTGAAACTTTCTATCCCATTGAAGCTCCGAAACCAGCCCCCATAACACAACCTCTTGAACCAATATCAAAGCCACAAGC ACCATCACCATCACCAGGGCTGGGATCGGCGGCAGCGGTGTCCACAAGTTCTTCATCAAACATTAGGATAGTAATTGCAG TAGCTCTAGCTGTTTCTGGTTTGATTTTCCTTTTAGCACTGATTTGCTTCATCAGAGCAAGGAGGAGGGGAAAGGTGATA ATGGGCAGCACTGCTTCTGCCACCGCAGATAGGCGTGTTGATGTGCCGCCTCAGGTGAACGTGTTTGAGAGAATGGAAGG AAACATCAAGGGACTGATTGTTGATGAGGGTGGTTTGGATGTGATTTATTGGAGAAAGCTTCAAGGTAGAAACACAGACA GGAATTTCCAAAAGGAGGTCTTGCCTAATCCCAAAAGCAGTGAAGAAGATGATCATGAAGGAAATCAAGGGAGAAGGTAT AAGTCTATTAAAGAAACTCCTCTTCTTAGAGGGAAATCTTCAACTTCCCACATGAATATATTTCCAGAAGAGCCATATAC AATTATGAGTATTCCACCTCCAGCTCCTCCTCCCATTGTTTTTGCATCAGTTGGAGCTGCTTCTTTCACATCAATTCCTA AGATGAAAACTCCTGCTCCTGCACCACCACCTTCCCTTCCAACAATACCTGATAGAAAGATTCAAGAACCAGAACCAGCA GTAGCACCTCCTCCACCAATTCCAGTTACAAAGAATCTAGCACCACCATCACCTCTTCCTCCACCAATCTCTACTAGAAA TAGTCCAGCACCACCACCTCCTCCTCCTCCACCAATTCCAGATAGAAAGAATCCAGCACCACCACCTCCTCCTCCACCAA TCCCTGCACCACCACCTCTTCCTCCTCCAATCTCTGCCAGAAAGAGTCCAGTGCCACCGCCTCCTCCACCAAAGTCAGGT GGTTTCAATTTCAAGTCATCCTCAAAACCACCACCTATCCCTATGGAAACACCAGTTACCAACAGTAAGCAAGGAAACTC TTCAGGTGAAGTAAGACTGAAGGCATTACATTGGGATAAGGTGAATACTAATCTTGACCACTCTATGGTGTGGAACAAAC TTGACCGTGGCTCTTTCAGGTAATCCTTAGATTTTCCTAAATTTATATGCTTGCAAACTTTGATTCTCCATTTTAGCTAG CATTCACTGATGATTTCTAAAATTTCAGGGTTGATGAGGATCTTATGGAAGAACTCTTTGGGTACATTGCCACCAAATCA AATAGTAATGATACCCTAAAAGGAAATGACTCAAAGAGTCCAAGAAGGGATGCCTCAGCTCGATCAACAAATGCTTTCCT TCTTGACCCCAGAAAATCACAGAACACTGCTATAGTTTTGAAATCTATGGCAGTATCACAAAAAGAAATTATCGATGCAC TGGTTGATGGTCAAGGCCTTAACACAGACACCATTGAAAAGCTTGCTAGAATAGCCCCAACAGAAGAAGAACAGTCCCTT ATACTTGAATATGAAGGAGACCCAGCAAGACTTGCAGCAGCTGAATCTTTCTTGTATCACATCCTCAAAGCTGTTCCTTC AGCATTTAAGCGGTTAAACGCCTTGCTATTCAGGTTGAACTATGACTCTGAGATTCTAGAAATCAAGGAGTTACTACAGA CCATTGAGCTAGGGTGTAAGGAGCTTCGAACACAAGGAGTGTTTTTAAAGCTACTTGAAGCAGTGCTTAAGGCCGGAAAT CGTATGAATGCAGGTACTCACAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGAG CACTGATGGGAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTCCGTACTGAAGGGAAACGTGCTGTTCTTAACC GCAACTGCAGTTTGAGTCGTAGTAACAGTAGGAGCAGCAACAGCAGTGGAGAGTCTCAGAACTCTGTTGCTTCAAATGAA CAAAGACAAAGGGAATATATAACACTAGGATTACCAATTGTAGGAGGGGTCAGTTCTGAGTTTTCCAATGCAAAGAAAGC GGCACTTACAGATTACAACACTTTTGTTGGTTCAATTTCAGCACTCTCAGCAAGGATAGTAGACTTCCGGCAACTTGTTC CCAAGTTTGGAGATGATAAAGGAGGAAAGTTTTTTAGAGAAATGAACAATTTTCTTGAAAATGCTGAGGAGGAATTGAAA TTAGTAAAAGAAGAGCAAACAAGAGTAATGCAGCTTGTCAGGTGCACAACACATTATTACCAAGGAGCTTCAAAAGATAG TGCAGACTACGCTCTCTCTTTATTTGTCATAGTCAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCATAGAGATTGCTC GTAACATGCAGAAGAGGAAGGTACCCAAGGCAAATTCAGGGTAAAATCAACAGAGGCACCAGCAAAATGGATTATGAGGT TTCAAACATTCAAACCTGCTAGAACATAACAGATCAAGGAAGTCCAGGATTGGCCTAATTCATTCAAATTTTTTTCAATT GGACAATTTACACAAGGGAACTGAAGTCCTAAAGTCCTGGCTCAAGTGTGTTTGGATCTCACAATGGATAGGAGAAAAAG TAGCTTTAGATGAATGTAATGGAAATACAAACACACATCTCTTTCAAACTTTGAATGAGACAGCTCACAAATTCGGGTGT CTTGGAAGAGAGTTGACAGTGGTCTGGACACAACCTAGTTCTGCTATCCATTTGAGGTTCTGATTTTGTGAAAGCAGGCT ATGCTTTTGCAGTGATAAGAACAGTTTGTATGAGGCAAATTCAGAAGCTAGACACGTCGTTGTGATCCCCCCTCCCTCTA AATGTACACCTCACTTGCATAGGGAACTATTTTCTCTACCTTTTTTCAAGTTTTGTGTATAAACATGTTGGATTCTTTTG TCATCAACTGGAACTTCCCCTTTATTCTCACTTCCTATTGTATTCAATTTGTAAGTTTAATGAGAGTGA
CDS sequence (LotjaGi2g1v0313100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGAATGTGATGCTTTTTCTGAGCAGCCTTATTGTTTTACACAGTTTTCTAACACCAACTTGCCATTGCCAGAC CTGTTCTCCTCAGAACATTGAAACTTTCTATCCCATTGAAGCTCCGAAACCAGCCCCCATAACACAACCTCTTGAACCAA TATCAAAGCCACAAGCACCATCACCATCACCAGGGCTGGGATCGGCGGCAGCGGTGTCCACAAGTTCTTCATCAAACATT AGGATAGTAATTGCAGTAGCTCTAGCTGTTTCTGGTTTGATTTTCCTTTTAGCACTGATTTGCTTCATCAGAGCAAGGAG GAGGGGAAAGGTGATAATGGGCAGCACTGCTTCTGCCACCGCAGATAGGCGTGTTGATGTGCCGCCTCAGGTGAACGTGT TTGAGAGAATGGAAGGAAACATCAAGGGACTGATTGTTGATGAGGGTGGTTTGGATGTGATTTATTGGAGAAAGCTTCAA GGTAGAAACACAGACAGGAATTTCCAAAAGGAGGTCTTGCCTAATCCCAAAAGCAGTGAAGAAGATGATCATGAAGGAAA TCAAGGGAGAAGGTATAAGTCTATTAAAGAAACTCCTCTTCTTAGAGGGAAATCTTCAACTTCCCACATGAATATATTTC CAGAAGAGCCATATACAATTATGAGTATTCCACCTCCAGCTCCTCCTCCCATTGTTTTTGCATCAGTTGGAGCTGCTTCT TTCACATCAATTCCTAAGATGAAAACTCCTGCTCCTGCACCACCACCTTCCCTTCCAACAATACCTGATAGAAAGATTCA AGAACCAGAACCAGCAGTAGCACCTCCTCCACCAATTCCAGTTACAAAGAATCTAGCACCACCATCACCTCTTCCTCCAC CAATCTCTACTAGAAATAGTCCAGCACCACCACCTCCTCCTCCTCCACCAATTCCAGATAGAAAGAATCCAGCACCACCA CCTCCTCCTCCACCAATCCCTGCACCACCACCTCTTCCTCCTCCAATCTCTGCCAGAAAGAGTCCAGTGCCACCGCCTCC TCCACCAAAGTCAGGTGGTTTCAATTTCAAGTCATCCTCAAAACCACCACCTATCCCTATGGAAACACCAGTTACCAACA GTAAGCAAGGAAACTCTTCAGGTGAAGTAAGACTGAAGGCATTACATTGGGATAAGGTGAATACTAATCTTGACCACTCT ATGGTGTGGAACAAACTTGACCGTGGCTCTTTCAGGGTTGATGAGGATCTTATGGAAGAACTCTTTGGGTACATTGCCAC CAAATCAAATAGTAATGATACCCTAAAAGGAAATGACTCAAAGAGTCCAAGAAGGGATGCCTCAGCTCGATCAACAAATG CTTTCCTTCTTGACCCCAGAAAATCACAGAACACTGCTATAGTTTTGAAATCTATGGCAGTATCACAAAAAGAAATTATC GATGCACTGGTTGATGGTCAAGGCCTTAACACAGACACCATTGAAAAGCTTGCTAGAATAGCCCCAACAGAAGAAGAACA GTCCCTTATACTTGAATATGAAGGAGACCCAGCAAGACTTGCAGCAGCTGAATCTTTCTTGTATCACATCCTCAAAGCTG TTCCTTCAGCATTTAAGCGGTTAAACGCCTTGCTATTCAGGTTGAACTATGACTCTGAGATTCTAGAAATCAAGGAGTTA CTACAGACCATTGAGCTAGGGTGTAAGGAGCTTCGAACACAAGGAGTGTTTTTAAAGCTACTTGAAGCAGTGCTTAAGGC CGGAAATCGTATGAATGCAGGTACTCACAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGGAAGCTCTCTGATG TCAAGAGCACTGATGGGAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTCCGTACTGAAGGGAAACGTGCTGTT CTTAACCGCAACTGCAGTTTGAGTCGTAGTAACAGTAGGAGCAGCAACAGCAGTGGAGAGTCTCAGAACTCTGTTGCTTC AAATGAACAAAGACAAAGGGAATATATAACACTAGGATTACCAATTGTAGGAGGGGTCAGTTCTGAGTTTTCCAATGCAA AGAAAGCGGCACTTACAGATTACAACACTTTTGTTGGTTCAATTTCAGCACTCTCAGCAAGGATAGTAGACTTCCGGCAA CTTGTTCCCAAGTTTGGAGATGATAAAGGAGGAAAGTTTTTTAGAGAAATGAACAATTTTCTTGAAAATGCTGAGGAGGA ATTGAAATTAGTAAAAGAAGAGCAAACAAGAGTAATGCAGCTTGTCAGGTGCACAACACATTATTACCAAGGAGCTTCAA AAGATAGTGCAGACTACGCTCTCTCTTTATTTGTCATAGTCAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCATAGAG ATTGCTCGTAACATGCAGAAGAGGAAGGTACCCAAGGCAAATTCAGGGTAA
Protein sequence (LotjaGi2g1v0313100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALNVMLFLSSLIVLHSFLTPTCHCQTCSPQNIETFYPIEAPKPAPITQPLEPISKPQAPSPSPGLGSAAAVSTSSSSNI RIVIAVALAVSGLIFLLALICFIRARRRGKVIMGSTASATADRRVDVPPQVNVFERMEGNIKGLIVDEGGLDVIYWRKLQ GRNTDRNFQKEVLPNPKSSEEDDHEGNQGRRYKSIKETPLLRGKSSTSHMNIFPEEPYTIMSIPPPAPPPIVFASVGAAS FTSIPKMKTPAPAPPPSLPTIPDRKIQEPEPAVAPPPPIPVTKNLAPPSPLPPPISTRNSPAPPPPPPPPIPDRKNPAPP PPPPPIPAPPPLPPPISARKSPVPPPPPPKSGGFNFKSSSKPPPIPMETPVTNSKQGNSSGEVRLKALHWDKVNTNLDHS MVWNKLDRGSFRVDEDLMEELFGYIATKSNSNDTLKGNDSKSPRRDASARSTNAFLLDPRKSQNTAIVLKSMAVSQKEII DALVDGQGLNTDTIEKLARIAPTEEEQSLILEYEGDPARLAAAESFLYHILKAVPSAFKRLNALLFRLNYDSEILEIKEL LQTIELGCKELRTQGVFLKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRTEGKRAV LNRNCSLSRSNSRSSNSSGESQNSVASNEQRQREYITLGLPIVGGVSSEFSNAKKAALTDYNTFVGSISALSARIVDFRQ LVPKFGDDKGGKFFREMNNFLENAEEELKLVKEEQTRVMQLVRCTTHYYQGASKDSADYALSLFVIVKDFLGMVDQACIE IARNMQKRKVPKANSG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 7 | 20 | 14 | - | – | |
| PANTHER | 10 | 811 | 802 | 1.1E-301 | – | |
| PANTHER | 10 | 811 | 802 | 1.1E-301 | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Phobius | 26 | 81 | 56 | - | – | |
| MobiDBLite | 48 | 70 | 23 | - | – | |
| Phobius | 82 | 103 | 22 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 104 | 816 | 713 | - | – | |
| MobiDBLite | 167 | 209 | 43 | - | – | |
| MobiDBLite | 175 | 198 | 24 | - | – | |
| MobiDBLite | 247 | 379 | 133 | - | – | |
| MobiDBLite | 248 | 262 | 15 | - | – | |
| MobiDBLite | 269 | 352 | 84 | - | – | |
| Gene3D | 372 | 654 | 283 | 1.5E-66 | ||
| SMART | 375 | 809 | 435 | 1.9E-104 | ||
| ProSiteProfiles | 375 | 816 | 442 | 48.095 | ||
| Pfam | 382 | 794 | 413 | 9.5E-99 | ||
| MobiDBLite | 429 | 454 | 26 | - | – | |
| SUPERFAMILY | 455 | 810 | 356 | 1.15E-70 | – | |
| MobiDBLite | 645 | 670 | 26 | - | – | |
| Gene3D | 670 | 815 | 146 | 9.1E-12 | ||
| Coils | 734 | 761 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0313100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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