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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0328100 |
| Transcript ID | LotjaGi2g1v0328100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G65500.2 U-box domain-containing protein kinase family protein; Swiss-Prot: sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50; TrEMBL-Plants: tr|I1J504|I1J504_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0328100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:80336296..80341921) extracted from Lotus japonicus Gifu genome v1.2.
TTGAAATTAAGATTAAAATTCAAACAGCAAAGAGATTATATATACATTATCATTATAATATATGACCCCAGCTCCATTTG CCAATCATGATGACATGCCATATACAAAAGTCCAAAGCTGGCCTCCCCTTGGCCTCTTCCCTTGGAAACTCCTGATAAAA GCAATGACAGAATAGAGTTCAAACCAAACACTTTCTGATAATTCACAAAACAAAGCTTTGAAAATGATGATGATACACCA ACACACACTAGTCCTCTGAGCAACCAGAGAGAGAAAATTGGGTACCTTAATTTGGACAATCAAATGGATGCAACTCAAGC AGAAAAAATCTATGTTGCTATTAGCAATGATGCACAGGATGGATTTAACACTTTGAATTGGGCTCTCAGGAAATGGAATT CTCATCCAATTTCCATTGTGATTCTCCATGTGACACACAAGATTTCCATGGATTATGTTTACACACCATGTAAGTTGGGC TTGTTCTTTGTTTACAATTGAAATTCAATTGGGTTTGGCTTAGTTTTGAGATTCTGTTGCAGTTGGGAAACTTCCAGCAA AATCTGTGAATGATGAAAAGCTAGAAGTTCTCAGGAAAGATGAGAAAGAGAAAATCAAGAAGCTGTTTTCCAAGTATATA TCTTTTTGTGGCAAGGTGTGTCCATAATTTTAGTTCTTAATAAATAACACTATTCAATTGCTGGGATCATATGAAATTAA AGTACTTTCCTCAAATTATTGTCTTGTGTTTGTTTCTGCTTCTCACAGGTGCCAGCTGAAATTTTTGAAGTTGAGAAATT TGATGAGCCTATCCAAAAGCGCACCATAGACTTGATATTTGGTCTAGGAATAACCAAATTGGTCATAGGATTTTCATTCA TGAAGCCTTCCTTGTACTCTTTCAATTCCTTGATCTTTTTCTTCTAGAACTTTATTCATGGAACTCGCGCATAACGAGAG CTTAGCACCGGGTTTGCCCTTTTTTATGTTATGCTAAAAATTCTTTGATTTTCTTTTTTCTTTTTTCTTTTGGCTTAGGA AATCAAGAGGTGCCATGAGTGGATTGTTCTATGTTCATCAGCACAAGCCTGCATTCTGTGATTTGTTTATTATTTGTGCT GGGAAGCAAGTTTATCTCAGAGGAAATAATGATGAGCAAATCATGGAAGATGATAAGGGAGTCATGGTTGCCAGAATGAG AGATAAGATCACTTTTAAAGATTGGCTAGACAAAATGTTCAATGACAAAAACAATGATTCCTTAGATAGAACTGCATCTC CTTCCTCAAACAATTTGGATTCCTCTGTGACACAAAATCACTGGGAGTCTTGTCTCCAAGAAATTGATAATTACTATCAA CAATTGCTATCTTCATCAAATTTGGATGATGGAACCTGCAGGCAGGACAATGATCCAATTGAGCCAGATGTCACTGAAAG GAACTACTCTATTAAGGTAACCAAACAATGCATAGATATTTACATGAAACATGTGGCCTTGATTAGTGCTAGTATCTATC CGTTTTGTTGTATTTCTTTTTGTTTGTTCTGAGGAGTTGTTAGATAATTGGTTTCACAATACAATATATAATTTTTTTTT GGACAACTTTTCTTTCTTTGCATAGTATTAAAATAAGAAGATGCATAAAAGTCTAAACTAGCAATCTAATTCCATTGATC TTCTTACTTTTCTTCAAATCTTAAAGTTTGAGATTGATGGGACCCATTTTAGCTTAGGTTACAGCATATGGAAACCATTT TCAAATCTCTACCTTGTCCTTTATCCGTGATTAGCTTTCCATGTTTTACTTTGGCTAGAAAAAGTAGTTCTTCAATTATT TGTTTATATGCTTTTGTTCCCCCTTTTATGGTTTGACATGGTGTGTTTATTTGACAAAAATTAATGTTACTTAATTTGTT CACAGAGTGCAGCAGAAAAAATTGAGATCCTGAAAAATAAACTGAACGAAGCTCGAAAAACAATCCAATTGAAGAGGAAA GAAGCCAAGGACAACCTAGAGAGACAAACAAAAGCTGAATGGGCAATTTTATTATGCAACAGTCGGGTAACTAATATTCA TGCAAAGTTCTAAGCCTCTTTTTGCAACACATCCCTGTTTATTAAATAAAATTTAGATGGGTGATTGTACTAAAAATGCT CTATAGTGCAATTCCTTTTATCAAATTTCAAAACAAATAAAGAAACACATGCAAAATGTAAGATCCGGGTGTTACACGAT TTACACGTAAGACAATTCCTCGCCTCCTCCAGTGCGTATCTTCCCAAGACTCAATCTCAGGGCCTAAGGGATAAGTACCT TGGGCACACCAACTGAGCTAGACTGCTCAAGGTACTTAGCCCTCAGGTCTTGTTATCAACTCAAGTGAAGGTAAATTACT CGTTGACGGGACGAGGAAATGTCTTACGGGTAGGCAACAAACACTTGAATGTTACATTAAAAAGTAGCTCAACTGGTACC AAACTTGCGCGCCAAGGTAATTAGCCATTAGCTAAAAAAATTGAATGTCATTTAACATAAATTGTTTTCTATGTTTAGGC AGAAGAAGTTGAAGGTCAAATAAGGGAAGAGGTAAGCACAAAGGAAGAACTAAAGAAGGAAGTGGAAGCAGAGAAAGAGC AAATAAAGGAAATGAAAATTGAGATTGAAGAGAGGAAGAGGAGGGCAGGTTCACTAACAGGACTCCAACGCGAGATGTCA AGCAGGCTCCAAATGTCGACGTTGGCGAGGTCAGGAGCGGAGGCACAACTAGAGAGAGCAGTGAGTGAAAGGAGGGATAT GGTGAGGGAGATAGAGGAGCTGCGGAGGCAGAGGGATGTATTGAAGAGGAGGATCGAGTTCTGCAAGCAGAAAGATGCCA TAAGCATGGCGGCGAGGATGAGTGACACATGTTGTAGTTTTAGGGAGTACACAGAGGAGGAGCTGAGGTTGGCCACCGAA AACTTCTCCGAGCGGCTGAGGTTGAAGTCCGGTGGGGATTGGACCAACGTATATAGAGGACACTTCAACCACTCGACTTT TGCAGTCAAAATGCTCCCTTCTTATGCTTCTTTGTCTCACCAATATTTTCATTCCAAGGTAAAAATCACATGTAGATTTA ATTGTGATACATTGAAAATTAATTTTTTTTCCTCAAATTTTCCAGATATTTAGTACTATTTACCTTTTTATGAAATTTTT GGAAATAATTTTTATTTTTTAATTAAAAGTGAGTCACTTCTGATAAGGATTATGATTTTTAGAGTCTCACATTTTTTATA ACTCGTACCTCACCCAGCTCACCTCACTTTGGCAGCATAAGAAAACATAACATTCAACATTAACATGTTTCTTTTCTTCT GTTTAAATGACTGTCTTAACTGTACCAACTATAATCATGTCACATGTGAGTTGCAATTTATTTTCTTCAAATAGCCTGCA TTTACAAATTTACTACTGCATTTTCAGATGAGGCTTCTAGGTGATATTAGGCAACCTCATCTGGTTGCCATGGTGGGCTT TTGCTCTGAGCCCAAATGCTTAGTTTTGGAATACTTGTGCAACGGAAGCTTGCGAGACATGCTATTTTCTAGGAGACGAA GCCGGGCCTTACGGTGGCATGACCGGATACGAATAGCGACAGAAGTTTGCTCAGGCTTGGGCTATCTCAACGCAGCAAAG CAGAGGCCTGTTATTCATTGTCATTTGAGCCCAGCCAACGTCCTCCTAGACCGCAATCTGGTTGCGAAGATCACGGGCTT CGGGCTTCACGAGTGCCATGACGAGGAATGTAACGCGGAGACAGATTTGAGGGCCGTAGGGGTTTTGTTGCTGCAGCTTC TAACCGGAAGAAATTGGGTCGGGCTCGTTGACGAGGCCCTGATATCAGACATGGATACAGAGGCACTGGTTAAAGTTCTT GATGACATGGCTGGACAATGGCCATTGAATCTAGCGAAAGAGCTCGTGAACCTAGCTATCAGGTGCATGTCTATGACAGG CAAGCCCAACCCAGATTTTAGCATTGCAAGTGTCTTGAAGGAACTCAATAAGATTAGAAGAAAGGGTGATGAAATATTTA CAAGGGAAGGACAAAAAGTAATCAATGGAGGGTGTATAGATAGAGAGAGCTCTAGCGATGTGCCTAGTGTGTTCATTTGC CCTATTCTGCAGGTTGGCTCCTTAATCTTTGAATTTTGTTTCTAACTTTTTCTATTTAGCTTGCTATAAATAAGATCAAA ATATAAAAAGCATACAACTAATAATCCCAAGTATCTAAGGTTGTGTTTTTGTTTTTGTTTTTGTTATGTTTGGCGCAGGA TGTGATGAAAAACCCACACGTGGCGGCAGATGGGTTTTCTTATGAGCTGGAAGCAATAGAACAGTGGTTGCAGTCAGGGA ATGAAAGATCACCTATGACAAATTTAAGGATGAAGCACACATTCCTTACTCCGAATCACACTCTTCGTTCCTTAATTGAT GATTGGCAGGAAAAATCAGCCAACGTTGAAAATTAATACCATTTTTTTAGTTAAGTAGAATATGTACAGCTAAACTGTGG ATTGTAACTTATTTTACTTCTCATTACCATTGGAGCCGGGAAAAAAACTACCAATTTAATTACAGTAACTACTGGTGCAG GTTCAGAGATTAATCCTCTAATGTTGAGACTTCACATGAAACCCTTGTCGAAATTTTGTCTATTTCTCTTCATATCTATT GCAAAGATAGAGCCTCTGAAGATGAAGATAGCACAAAGTTTCACATGACAATGTTATATGACCTGAGATGATCCTGATCC CAGATTCAACATATAACTCCTAACAACTCATAATTTAGTTATATCCCTTTTCCTTAGTGAACTGACATGACTTGCTGTAA CTCTTAAATATCAACTCAATGTGAAACTACAAAAATGATATACTAATTAATAAAAAGTTATAAATATGTAATTACACAAT TTTTCCCCAGCAGACAAATAGCGTGTGGAAGGAGCTTTCCAATTTTTTAAGCACAGCTGACATTTTTTAAAACTTTATCC AATATAATATGGTATTTACCTTTTCCTTTGTGAGCTGAAATATGCTTATATCATCTTCTAAGCCACACAGAAGAGAACAA AAGAATAATGAGACCCGCAATCATTTGAACCAACAGCAACAGCAGGCAACTTTGTTTGGCAGAGAATATTCAGATTGCAG TGAGGGATCAGCGGTGATGTCTTCGGCCTTCGACCATGTATACACCCCTCGTTCTTCTTGACTGCCAGGGACAGTGTTGT CCAGTAGGAATGCCACCAACAATGTTACCACCATGTTCATGGACAAAAGAGCATTGATGGCAAAATCAAGCTGAAAAGTT TTGGACAAAGAAAATGACATGTTAAGCACACCCTTATCAGAAGACAAGGTAATAGCTGTATCTCTAAGAAACTTAAGCAC AGGTATAGATTTGGGATAGGACTATGATCGGAACTGGACATATTGAACGTAGAAAAGAGCAAGGTTGCTGAGAAATTGGA GAGACTCAGCCACCCTCCCTAAGTTCCAAACCCCCAAAAGATACTAATACTCACCCTAAACTCTCTATTTATAGGCAACA CACTAACCCACCAACTAATTAACCCA
CDS sequence (LotjaGi2g1v0328100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGGATTGTTCTATGTTCATCAGCACAAGCCTGCATTCTGTGATTTGTTTATTATTTGTGCTGGGAAGCAAGTTTA TCTCAGAGGAAATAATGATGAGCAAATCATGGAAGATGATAAGGGAGTCATGGTTGCCAGAATGAGAGATAAGATCACTT TTAAAGATTGGCTAGACAAAATGTTCAATGACAAAAACAATGATTCCTTAGATAGAACTGCATCTCCTTCCTCAAACAAT TTGGATTCCTCTGTGACACAAAATCACTGGGAGTCTTGTCTCCAAGAAATTGATAATTACTATCAACAATTGCTATCTTC ATCAAATTTGGATGATGGAACCTGCAGGCAGGACAATGATCCAATTGAGCCAGATGTCACTGAAAGGAACTACTCTATTA AGAGTGCAGCAGAAAAAATTGAGATCCTGAAAAATAAACTGAACGAAGCTCGAAAAACAATCCAATTGAAGAGGAAAGAA GCCAAGGACAACCTAGAGAGACAAACAAAAGCTGAATGGGCAATTTTATTATGCAACAGTCGGGCAGAAGAAGTTGAAGG TCAAATAAGGGAAGAGGTAAGCACAAAGGAAGAACTAAAGAAGGAAGTGGAAGCAGAGAAAGAGCAAATAAAGGAAATGA AAATTGAGATTGAAGAGAGGAAGAGGAGGGCAGGTTCACTAACAGGACTCCAACGCGAGATGTCAAGCAGGCTCCAAATG TCGACGTTGGCGAGGTCAGGAGCGGAGGCACAACTAGAGAGAGCAGTGAGTGAAAGGAGGGATATGGTGAGGGAGATAGA GGAGCTGCGGAGGCAGAGGGATGTATTGAAGAGGAGGATCGAGTTCTGCAAGCAGAAAGATGCCATAAGCATGGCGGCGA GGATGAGTGACACATGTTGTAGTTTTAGGGAGTACACAGAGGAGGAGCTGAGGTTGGCCACCGAAAACTTCTCCGAGCGG CTGAGGTTGAAGTCCGGTGGGGATTGGACCAACGTATATAGAGGACACTTCAACCACTCGACTTTTGCAGTCAAAATGCT CCCTTCTTATGCTTCTTTGTCTCACCAATATTTTCATTCCAAGATGAGGCTTCTAGGTGATATTAGGCAACCTCATCTGG TTGCCATGGTGGGCTTTTGCTCTGAGCCCAAATGCTTAGTTTTGGAATACTTGTGCAACGGAAGCTTGCGAGACATGCTA TTTTCTAGGAGACGAAGCCGGGCCTTACGGTGGCATGACCGGATACGAATAGCGACAGAAGTTTGCTCAGGCTTGGGCTA TCTCAACGCAGCAAAGCAGAGGCCTGTTATTCATTGTCATTTGAGCCCAGCCAACGTCCTCCTAGACCGCAATCTGGTTG CGAAGATCACGGGCTTCGGGCTTCACGAGTGCCATGACGAGGAATGTAACGCGGAGACAGATTTGAGGGCCGTAGGGGTT TTGTTGCTGCAGCTTCTAACCGGAAGAAATTGGGTCGGGCTCGTTGACGAGGCCCTGATATCAGACATGGATACAGAGGC ACTGGTTAAAGTTCTTGATGACATGGCTGGACAATGGCCATTGAATCTAGCGAAAGAGCTCGTGAACCTAGCTATCAGGT GCATGTCTATGACAGGCAAGCCCAACCCAGATTTTAGCATTGCAAGTGTCTTGAAGGAACTCAATAAGATTAGAAGAAAG GGTGATGAAATATTTACAAGGGAAGGACAAAAAGTAATCAATGGAGGGTGTATAGATAGAGAGAGCTCTAGCGATGTGCC TAGTGTGTTCATTTGCCCTATTCTGCAGGATGTGATGAAAAACCCACACGTGGCGGCAGATGGGTTTTCTTATGAGCTGG AAGCAATAGAACAGTGGTTGCAGTCAGGGAATGAAAGATCACCTATGACAAATTTAAGGATGAAGCACACATTCCTTACT CCGAATCACACTCTTCGTTCCTTAATTGATGATTGGCAGGAAAAATCAGCCAACGTTGAAAATTAA
Protein sequence (LotjaGi2g1v0328100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGLFYVHQHKPAFCDLFIICAGKQVYLRGNNDEQIMEDDKGVMVARMRDKITFKDWLDKMFNDKNNDSLDRTASPSSNN LDSSVTQNHWESCLQEIDNYYQQLLSSSNLDDGTCRQDNDPIEPDVTERNYSIKSAAEKIEILKNKLNEARKTIQLKRKE AKDNLERQTKAEWAILLCNSRAEEVEGQIREEVSTKEELKKEVEAEKEQIKEMKIEIEERKRRAGSLTGLQREMSSRLQM STLARSGAEAQLERAVSERRDMVREIEELRRQRDVLKRRIEFCKQKDAISMAARMSDTCCSFREYTEEELRLATENFSER LRLKSGGDWTNVYRGHFNHSTFAVKMLPSYASLSHQYFHSKMRLLGDIRQPHLVAMVGFCSEPKCLVLEYLCNGSLRDML FSRRRSRALRWHDRIRIATEVCSGLGYLNAAKQRPVIHCHLSPANVLLDRNLVAKITGFGLHECHDEECNAETDLRAVGV LLLQLLTGRNWVGLVDEALISDMDTEALVKVLDDMAGQWPLNLAKELVNLAIRCMSMTGKPNPDFSIASVLKELNKIRRK GDEIFTREGQKVINGGCIDRESSSDVPSVFICPILQDVMKNPHVAADGFSYELEAIEQWLQSGNERSPMTNLRMKHTFLT PNHTLRSLIDDWQEKSANVEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 658 | 657 | 3.4E-289 | – | |
| PANTHER | 2 | 658 | 657 | 3.4E-289 | – | |
| CDD | 128 | 253 | 126 | 9.02173E-4 | – | |
| Coils | 133 | 171 | 39 | - | – | |
| Coils | 182 | 223 | 42 | - | – | |
| Coils | 245 | 286 | 42 | - | – | |
| Gene3D | 291 | 390 | 100 | 8.0E-14 | – | |
| SUPERFAMILY | 300 | 545 | 246 | 6.6E-37 | ||
| ProSiteProfiles | 318 | 565 | 248 | 15.496 | ||
| Pfam | 327 | 467 | 141 | 4.0E-23 | ||
| Gene3D | 392 | 567 | 176 | 5.9E-20 | – | |
| SUPERFAMILY | 582 | 656 | 75 | 5.12E-23 | – | |
| Gene3D | 584 | 660 | 77 | 2.3E-27 | ||
| ProSiteProfiles | 585 | 659 | 75 | 35.004 | ||
| Pfam | 586 | 655 | 70 | 2.2E-14 | ||
| SMART | 589 | 652 | 64 | 2.9E-25 | ||
| CDD | 590 | 631 | 42 | 6.26792E-23 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi2g1v0328100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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