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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0341200 |
| Transcript ID | LotjaGi2g1v0341200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb-like transcription factor family protein; TAIR: AT5G45580.2 Homeodomain-like superfamily protein; Swiss-Prot: sp|C0SVS4|PHLB_ARATH Myb family transcription factor PHL11; TrEMBL-Plants: tr|V7CLJ1|V7CLJ1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0341200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81816599..81823692) extracted from Lotus japonicus Gifu genome v1.2.
AATAATTTGAATCGCTGTTAGAAAATTATATATAAGCCCATCAAACGCCGTATTTGACGCTTTTTGTTTTTTTGTTGATT CCTACGCGACGGAGCCATTTTCTCTTTTTTATTCATTTATTTATTTTCACACCAAAACTCACTCCTTCCTCTGTTTTAGT CTAATCATTCAATGATGTTCTACTTTCTGACTTGTTTGGTTTCTGGTCTGTGATTCCAATAAGCTATGAATGATTGCTGA TCGGAGTATTTTGTAGCTTGTGGAGTTACAGATTCTACCATTTCCATTAGCAAAAACATCTTCACTTGCATAGGGTATAT CCCCTTAAAGACTAGAATTTGCTTTTTTGGCAATTGAAGACAGAAAAGAGAGAAGAGTTGTTGTTGAGTGAGTGAGGGTG TGAAGTGTGTGATGGAGAGTGGTGGTGGCAGAGAAGGTTATGATGGGGTGGTGATGATGATGACAAGAGACCCAAAGCCG AGGCTGAGGTGGACTGCTGATCTTCACGACCGGTTCGTCGATGCTGTCACAAAGCTTGGTGGCCCCGAGAGTATGTTCTA CAACCCTTTTCTTTGATTACAGTGTGCAGTGAAACCAAAATCACAATCGTCAAAAACAAGTTCTCTTCTTCTAGCTTTTG CGATTGTTTACCATGATTTTGGTTTCATAGTGATTTTTCATAATGTATCCAACCATGCAAGTAGGTGGTATTGTTGAATA CAAAGAAGTTAACTTGTAAGAGAAGTTTTCACTGGAAGAGAAGAATGTCTTCTGTTTGATGTTAATAAATGTCTGAAACT GGGAAAATGTAATTCAAATACCTTTCCATGAAGTTTTGGACTCTATTTCAATTTTAAAAGCTTTTCATTCCAAATAGTTT TGACATTGATTTGAAATGTTTTGTTGTGTGTTCAGAGGCGACTCCCAAGTCTGTTCTGAGGTTAATGGGCTTGAAAGGCT TGACATTATATCATTTGAAGAGCCATTTACAGGTAACTGGTTTCTCCATTTTTTCTTCTGTCTTATTACTGAAAATATAA CTTATTAATAACTATTTTATCAATATTATTTTCAGTCATTAGGACTACAATAGAGTAATATATATATAGTAATACAAAAA TTCTAAGATGATACTTTCATTAGTACCATGGATTGGTGAAGAATCAAATTGTGCCGGCTTCTCTATCTTTTTATGCTATT AGTATTTATTAGCTGACTAACCTCAAATTTATCTTCCTTTTTCCTTCATTTTACTATTTCTCCTAACCATCATCAAAGAC TTGCCATTTGGAGGCATAATATGGTGTTGCCTGTTAATTTGCAGAAGTATAGACTTGGACAGCAGGCTAGAAAGCAAAGT GACGAACACTACAAAGAAAATAATAGTGAGTTTCTGAATCAATCTTTTTTAACTAATTATCTTATAATTCAACCAATTCT CCAAAAGAGAGGTTATGTTTTACTAGCTAGTTTTTGTCTTTCTATTAGTTTTGTCTCTTTGCTTAAACTAGAGGGCATAC AATCTGGAAAAGTTCAATAACATTCCTTCCTTGTTTGTGTTTCTTCTTTAATTAGGATGTTCATATGTAAATTTCAGTCA TCGTTCTTCAGGGCCTAATACCAGTTACAGTTACAGAGGTGATAAGGAAGATAATGAAGGGGGGTATGTTACAATTTGAC TATTTGAGCAATAATTCTATTTCACTTTTGTTTAGGTTATATGCATGGCAATAATTCCCATGACCCCAATTCTCACCTAA CACTTGTTACTTAGGCATTAGCATTTCAATTTTTATGTAAATGCAACTCACTGCATCTTTATAGTTTCTCCTTTGCTAAC TAATTTACATAACCAAAACAGAGAAATCCCAATAGCAGAAGCACTGAGATGTCAGATTGAAGTTCAAAAGAGATTGGAAG AGCAGCTTGAGGTAGTAATCATTTTTTACTTGCAAAGCTTTATCTGTGAGGACTGAGGTGTGACTTTCTGACAAAGTTTT CATGTTCAATTTTATAAAATCTTAATTCACTTGAACAAAGCCCTTCCTTGTAATAGGTACAGAAGAAATTGCAGATGAGA ATAGAGGCCCAAGGGAAGTATTTGCAAGCTGCATTAGAGAAAGCCCAGAGGAGCATCTCCCTGGATGGATCAGGCACTCT TGAAGCATCAAGAGCTCAGTTGTCTGAATTCAACTTTGCTTTGTCAAATTTCATGGAAAATATGAATAGAGACAGTAAAG ATGACATAATGGACATGAATGATTTTTATAATAAGAGTCATAGCTCAGCTTTCCATTATCAAGGAGGAGAGAGAGAAGAT TATGAGGATCAAAAGCCTAAGATTGAGGGGGAGTTTGACTTAAACATTAAAGGTAGCAACAATGAAATGGTATCTGCAGA TGGAGCTGAAATGGAATCCAAGATGCTTTCATATAGGGTATACAATTTTTGACCTGTCTCATGTTTAACCATTGAACTGA ATAATATTATTCTCAATTTACTTCCCAAAATATTGTCCATAATTTTCTTCCCTCTCTTATTGACCAAAGTTGCATATTAG GATAACATGTTATCTCTCATTTTCTAAAGGAAAGCTATGGTCTTTGCTTGTTCCCAATTTCTATATATCAAACCTAACAC CTTGCTTGGACAAACCAAGTCAATTTTTTTTTTCTTCCGTAAGACAACAAGTATCTGTGTCACTGCAACAAGAACACAAG TTTTGTAATCAATATAATCTTAACACAATTATTTATATGACATAAAGTACATCCAAAATGGTAAATTATACATATTTCAC TTTTCAAAATACTTGTCCTATACATCCAAATTTAATATTTATTCCTTTGAGATAAAACTTGTAAGTGAAAATGAGTACGT ATTCAAATAAACTTAAAGGAACATTTGAAGCCACTTCACACATATTATTTTACTTTATTATTTTTCTTAAGAATAAAATA GAAGTCACAATTAAGTTATTATTTTTTAATACTTTTGCAAAAAAGATGGAGCCGGTCAAGAATGAGCATCCACAAACATT ACTGCAATTGAGTCACCACTATAAGGTCAATTTTCTGTGGAGTTCAGATGAAAAATCAAATAAGTTCACAAAGAAAGCAA ACATGATTATAAACCTTCAACTGACAATGAAAATCACTTCTTGCACATATATGGCCAGCGTTCTTTTCTCCTCAAAGTTT TATTACAAGATCACTCAGATTTTCTGCTTGGAGGGTTGAATTCTTCATGCTTACATAATCTCATCAGACATAAGGTTGTA GGTACTCATCCATGCGTGTGTACTTCACCTCTGGATAAAGCTCTGACGCTTCCACTCCATGTTCTGCTATTTCAAAGTTT GTCAAACACCCTTCATAAAAAACATGATAGAAATGCCCCACTCCCACTTGGCTTGCAAAGTCCAAACCTGCAGGAATTCA CACAAATCAAGAGTCATTATTTATTGACATATGTATGAACTACTCTTTAGCAAAAGAAACTCTTTGACACCCTTCTTACA CATTTTTTTTATCAAGATATCTACAGTTGATAGTTGTGAGACTAATATATTGTCATTTGTCATCAGACTAAGCGGTAGGA GATTGACCGATAAATTTTTCCATTTATAAGAGTTGAAAAACGAACCCTCAATCATTTACTTAGAAGACGAAAGGTGAAAT CGGTAATTCAATTAACTCATTTGGTTACTCCTGACACATATTCTAGGTGTGCTTCTTTTTTATTATTTTATTTTGGGCAA ATTGGGTGCATTTTAACTTAAAAAATGAATTTTTCATACTTTTCCACCTTCATCAAATGAAAAGAGATAGGAAGAAAAAA AGAGAATTGAGAGATATATGTATGATAGATGATGTGATAAGGAAAAAATGAGAGATATGAAGAAAAAAGAAGTGAAAGTG AGATGAAATAGAAACTGAAATGTGAACATCTTTAACCTTTGAGGGAAGAAAGAAAGTCTTGTTCAGACATAGTGGACTTG TCTAGTTGCTTTCCTATGAGCTTCTCCCATTTCTCAATTAGCTCTCTTTGAGAGAGGATGTTTTCTGGTGGCCTTAGGTA CACTGTCTTGTTCAATGTTCGTGGATCATCAATTGTCTTGATTGTGTATGTCGCAACATCATCTTCATCCATTAAAACAA CTGCACCAAATAACAGCTTATTGTGAGTTCATCATCATACAAGGCATTTAGTTAACTAGAGAATCAATAGGTTGGGGACC AAAATTGGAAATGACGTTCTAGCTTCATTCATTCACTATGAAAGTTTATATACAAAGTCATTATTCAACTACCAAGCTAA CTGTTTCTAACAGATCAAGCTAACTACTCTAACAAACCATAAAACTACTTGTTAACTAACTACTTACAACAGAATTAATA ACCATCCAGTACAAATAACTAATTTAAGTATGTTCTAATTATTGTATCAGACCACGTGACTGTGTATCCGTAATCCGTTA ACACTAGTGCAAACAGACATAAACACTAAAATTCTGATTATAATTTCAGCACAAGATGGCATTAAAGAAAAGTATTAAAT TATAGAATTTGCTAATAATTTGAAAATTTGGATACCTTTGACATTGCCATCACCGTAGAGAAGCACTTTGTCTCGAGGTG GGAAGAGAGTACCCATCTGAGCGAGGTTAGAAGCGAAGTAGCCAGCAAAGCAGTTGGCAGATATATAGGTGAAAGGGATG TTGGCATCCTCAATTGCTTTCCTCACAGTCATTTTTTCATCGAATGTGACCCTTCCAGGTTCAAGTGCATGTCCCATGAG TGCTGGGTCCATGCCAAATTCTGAAGGCAGAAAACGCTAAAGGAAGAGAAAAGAAAAAGTTAGAGGAAAAGGAGTAATCA TTCATTCACATTATACTTTTTTTCTTTCAAAAATGATATATGAATACCTCTTTGTTTTTTTAGTTTGAATGTGCTTTCAC TCAATTGTGATATAAAACCTCTTTCACATTTGGGGCTTCAGAATGAGTGATCTCAAATTCTAATACGCCAAACAGACTTT CAACTAAAAACCAAAAACAGCATTAATAGTGACATACACCTAAAAACACCTCGTATTTTATACAATCAAGAAGGATATGA TGTGACCTAGACCTCTCTCCATCATTGATCTCTCCACATGTTCTAGGTGTCTAAGGGTGTTAATCACTATCAGTGGTTTA CCTATCACAACTCTTTTTGTTTCTACCTCTATCTACATTTTCTAATCACATATTATATCACTTATTTTATTTCTCCATTC TCTCTTTCTATTTATCTTTCTTTTAGTATAAGTGGAAAATACGTGAACAAAGCATTATTCGAGAAAACGTGAGTTTATTA AATTAGTAACATAAAAAATAGTATATTATTGTGGAAAATGCTTATAATATTTTTACCTTTTGCAGGAAGGTAAAACTTAA AAGTGTGAATTATGAAGAAATGTCTTGTATTTTCTCTGTTTTTCTCTCTTCTATTCCTCTCCTTCATCATTTTTATTATT CTCTCACTTATCACATCTTAATATTCATCTTATGTAACTAAATTATTTTCTATAGCATAATTTTATAATAATTTCCTCCA CCATCTAAAGAAAAGAGAATTTCATACACTCCACCGGGTTTCCGCGCACATAAGCCCAGAAAGTATATTTTAGTGGGCCA ACCAAATGTGTTCTTATTGATTATGTTGACCAAAAAAAATGTTTGGTATATGCCTTTATTTGGTACCCAAACGGTGGATA CATTTCAACCCAAAAATCTTAGAATTTGAATCAGTTCTAACTCTTTTACCATTGACCAATTTTTTTTTAACTCTCTTACC AATTTCAATAATTTACGGATATTCCATTAGTAGCAAAATGAAAAATATGTTACTGTTCAATATATATATATATATATATT ATTTGTAAAAAAAAATGTTTAAAAATTATTCAATTGTATGGAGTTATTTAAACCTAAAAAAACTTTGGTTAAATCATCTT AATCCTAGGTAGACCAATGATTTTTAAAATAACTATGTCAGAAATTCTATTATTTTAAATATTATCGGTCCAACTAAGAC TACGGTGATTATTTAAACTAAGTTTTTACATTTTTCATTGTTCATTTAGACAAGCTGTAATTTGTAAATATAAAAATAAT TTTTTTAAGTGTTTTAAATTTGTTTTGCAATTCTCATTTGATGTGGTGAAATATCAAAAGTTTCTTTTTAAGAGTGCGGC CCATACAAATTGAGCTCTCAACCTAAAGTTCAAACAAACATTTTTACCACTGCGATGACGGCTTGTCGGCTCAACCAACT TATGACCTCTAATTCTAAAATCTAAAGGCAAGGAGGGCATACACAAGTCCTACCGAGCAACAATAATATACAGATACTGC ATATGTACCTTAACGTTCCCTGCAGCCTTGATGGCTTCAACAAGTTTGAGCTGCATCAAAATGTTATGAGACCGGAAATG AACCCCAGACATGGTGCAGATCACAACATCCACGAGCTTCACCGCATCCACGAGGCTCTGGTGATCGGAGAAAGAAGCCT CCACAAGACGAGCACCTTGCTTCTTGAAGGACACCAGCATCTGCACCTTCTCTACATCAAGCCCAATGTCTGGACGTTGG AGAACATAAGTTTCATGCCCTTGCTCTATACTTGCCCTCACAATTCTCCTCCCAATATACCCTGTACCTCCCACAACAAG AACCTTGCTCTTAATTCCCATGGCCTTTATCTCCTCTCCTGTTCCTCAAGTCAAAGTTGATAATACTGTGTGCCTGAAGG GGCAAGGCTCATTCACTATATAAATATAAAGGGCTACATAAGGTATGGGCATAGCTCCTAAAGATGCATGTCTTGTTAAT TTAATTTGTAGTGCAAGTTACTCCATGATATAGTAATCAAAAGTGTGTCTTCCATATATGTAGTGCAAGTTACTTTACAG TCCATAAATGCTAGCTGGCGGCGTATGCAAATTCCAGATAGGAAAGAGATTCATACACCTAAAACACGTGGAAATAAATT GGAAGACCCGTATGAAACGAAAAAAAAAAAATGAGACGAGTCACCTAACTGTGG
CDS sequence (LotjaGi2g1v0341200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTGGTGGTGGCAGAGAAGGTTATGATGGGGTGGTGATGATGATGACAAGAGACCCAAAGCCGAGGCTGAGGTG GACTGCTGATCTTCACGACCGGTTCGTCGATGCTGTCACAAAGCTTGGTGGCCCCGAGAAGGCGACTCCCAAGTCTGTTC TGAGGTTAATGGGCTTGAAAGGCTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCT AGAAAGCAAAGTGACGAACACTACAAAGAAAATAATAGATGTTCATATGTAAATTTCAGTCATCGTTCTTCAGGGCCTAA TACCAGTTACAGTTACAGAGGTGATAAGGAAGATAATGAAGGGGGAGAAATCCCAATAGCAGAAGCACTGAGATGTCAGA TTGAAGTTCAAAAGAGATTGGAAGAGCAGCTTGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCCCAAGGGAAGTAT TTGCAAGCTGCATTAGAGAAAGCCCAGAGGAGCATCTCCCTGGATGGATCAGGCACTCTTGAAGCATCAAGAGCTCAGTT GTCTGAATTCAACTTTGCTTTGTCAAATTTCATGGAAAATATGAATAGAGACAGTAAAGATGACATAATGGACATGAATG ATTTTTATAATAAGAGTCATAGCTCAGCTTTCCATTATCAAGGAGGAGAGAGAGAAGATTATGAGGATCAAAAGCCTAAG ATTGAGGGGGAGTTTGACTTAAACATTAAAGGTAGCAACAATGAAATGGTATCTGCAGATGGAGCTGAAATGGAATCCAA GATGCTTTCATATAGGGTATACAATTTTTGA
Protein sequence (LotjaGi2g1v0341200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESGGGREGYDGVVMMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQA RKQSDEHYKENNRCSYVNFSHRSSGPNTSYSYRGDKEDNEGGEIPIAEALRCQIEVQKRLEEQLEVQKKLQMRIEAQGKY LQAALEKAQRSISLDGSGTLEASRAQLSEFNFALSNFMENMNRDSKDDIMDMNDFYNKSHSSAFHYQGGEREDYEDQKPK IEGEFDLNIKGSNNEMVSADGAEMESKMLSYRVYNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 270 | 265 | 1.1E-106 | – | |
| PANTHER | 6 | 270 | 265 | 1.1E-106 | – | |
| Gene3D | 18 | 80 | 63 | 9.0E-26 | – | |
| ProSiteProfiles | 19 | 79 | 61 | 12.027 | ||
| TIGRFAM | 22 | 77 | 56 | 2.7E-24 | ||
| SUPERFAMILY | 22 | 79 | 58 | 6.09E-16 | ||
| Pfam | 25 | 75 | 51 | 2.4E-7 | ||
| Pfam | 125 | 170 | 46 | 2.8E-23 | ||
| Coils | 127 | 157 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi2g1v0341200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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