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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0342500 |
| Transcript ID | LotjaGi2g1v0342500.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G19110.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6Z8C8|CDKF4_ORYSJ Cyclin-dependent kinase F-4; TrEMBL-Plants: tr|I1J828|I1J828_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0342500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81972674..81979564) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTCTCTTATATTATTCTATTTCTTGGCTGTCACGAACCACACCACATAGAGAGAGAAACAAAAAAAGCTAGAGAGAG AAACAAGGGTATCGTTTACGAACAACAAGAAACTCTGGATTCCACCTCTTCCCGTCCTTCGAGACGGTGGTTACGCTGCT TGCTCTTCAGGTTCTCCTCTCTCCCTCCGCTTTTCACTCCAGATCCGATCCGATCGCTTTTCGATTCTTCTGATTTCGTT TTCGCAATCGCTTCCGCTCTGATTTCACGTTTTTTTCTGCTTATCTGATGATTTTCTTGCTTGATTGATGCTCTTACAAT TGAATTAAATTGAATTAGGTTTTAGGCGTTGTTTTCTAGATTTCCATGGATTTGTGATATTTTTTGTGCTTTGGTATGAG TTAGAGTTTGGTGATGAGATTCTGTTGTGGTTGTTGTCATACTTGAACAATTTTCAGCTTCTGGAGCTTCATGTGTTGTG GTTTATGCATGATATTTTCATACTAACCGCCGTATATATTAACTTGTGGATTTTATCTGATGAATTGTTTCATAGAGCTG TATGTATGCAAATTGATTGCTGGATTTTTATCTGCTTGTAGGTATATTAATTGTTCTAAGCAATTTTACTTGTTCAGGCT CTTAATTTCGGTTTGATTTTGTGTGATTCCAGTTTTTGTTGAGATTTTTATTATCCTGGTCATATTTCGTGTTTTGGTAT GAGTTAGGGTTTGGATATGGATTCTGTTGTGGTGGTTGTCATAGTTGAACGATTTTCAGCTTCTGGAGCTTCATGTGGTG GCTGCTGCGATTGCATGATAATTTCATACTAACTGGCTAGATACTAACATGTGGATTTTATCTGATGAATTGTTACATAG AGCTGCATGTATGCAAATTAATTTCTGTAGTTTTAATTGCTTGTAAGTAAATTAGTTGTTGTAAGCAATTTTTCTTGTTC GCGCTCTTAATTGCTGTTTTGTTGAGATATTTATTCTCCTGGTCATATTTTTATGGGAAGCGGATTGAATGTTTGAAATT TTGGATAAATAATCTTACATTGATCTTGGTCTATGTTTTTTTTGGTTGCAGGCTGGTCTGGGTTTGAATCTAAAAGGTTG TGATTTGTATCTCGAGACATGGAGGGAGTTTGTTTCTCAACAAATGGCTACCAGTTTCTGTTTTTTGCATTCCAAGAAGT GCTTGATTGGCGGTTTTTCATCCTTGGAAATTTCCTTCCGGTTTCCTTTGTTAATTGCACTTAGTGTTCTGTTCCTCGTT AATGATCAGCACAGGGTGCGTGATGCTAGTTTCTTCTGATACAGGTGCTGCATCTTTAGTGCACTTATGCAAGTAAGCGC TTTTTTTTAATTATCTATGCAGAACACTAATTGAAAAACTAGTTCATTGATAAGTGCTCCTTTGACAGTGCATTGCTGAC CCAACATTCAGTTATATCCTCTGGTAAATCCTCTTCTGGGGTAAGATATCTATCTTAGAGAACCTCCAACATTATTGTCT ATTTCAGTTTGCTAAAATTTAACTCAGCCTATGCGTTCTTCTACAGGGATGAAGTATATCGATTGGTGACTGAATATTGG ATTCTGCGTGCATCTTTGAGTGAAGCATTTGCATTGATTCAGTACAGATTGTAGTTATCGTTTCGTGGTTACTCTTGATG GGTATTGTTGCTGACAATACATCCTTTACCTGAAGGTTCTGAAACAAATCTTACAGAAATTAGATGAATTAGATATTATC GTAGTCCTGAAGTCTTGGGTCAAGGTGGTTTTAGCTATTGGTTGATGCTATTGCTTTGATCAATCGGTTTGGTGGGACCT CAGAAGTGTCAGTATGATATCTGGTACTTTTTCATTTCTACCACCTTCGTCCTGCAGCCTTTACAAAGCCGTGGGTCTAT TAATGAATAAAGCTGTGCAGCCCTTCCACCAGAAAGTTTCTGCTTCTATGGCCTCTTTTGTCATGACAGAAAATTGATGG TGGATTTTGCTGGAGCAGCTGGAACCTGTTAATATTTTATACACCTCTTGAGCATCATCTACAAGAGATAAATGTCATCT ATCTTTTGTGTTTTTGTTTACATTTGTTGAATAAAGAAAGTGCTGCTTTGTATTCCAAGGGCGCAATGGAGAGGTGAATA TGAATTTCTTTTTTCCTGAAGAATTTACTATTTCCTACCTTATCTGCTGTTTTTTTTAATGACTTCTTGGAAAATACAGG TACACGATAATTAAGGAAGTTGGTGATGGAACGTTTGGGACTGTCTGGAGAGCTATAAATAAGCAAACTGGTGAAGTTGT AAGTGATCGTTAACATGAAGATGCTCCATTTGGATTTTGGATTCAGATTTTATCCTAACAAGTCATAAAATTACAGGTTG CAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGGTATTGCATCTTACT GATCTTTCTGAAGCCTTATTTGTTATATATTATTAATTATTATTCTTTTGTATCTAATCTCTATTTTCCTTGCTGGCAGT CATTACGAAAAATGAACCACCCAAATATTGTTAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTT GAGTATATGGTAGGTAACTGGATGTTTTGGTAGACAAGCGGGCTGAATTGGCTGATTTAAGATCTTAAATACTAATTGCT ATGTCAATTTCTGGGTGATGCAGGAATGCAACCTTTACCATCTTATGAAAGATAGGGAAAAGCTGTTCTCTGAAGGTGAA ATTAGAAATTGGTGTTTTCAGGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGCGACATGAAACC TGGTAATTTTATCTAGTCTTGTAGAGTACGTTGTTCATCATTCGTTTATATCATGTGTATCATGTAATGTATTTGTTGTT AGCATCTTGTTCTCTACTACCAATTCTCTACTTTCTTTTGTCAAAAAGTGATTTTTATGCAATTTGTAGATCTAGCTTGT TTTGATCAAGAACCTGACCGAGGGTTGTTTACGTCTTCATTCCTTAATTGCATAAATTTTACTGTTTTGACCCAAGGTTT GATGCTCTGCAGAAAACTTGCTGGTTACCAAGGATATTATAAAAATTGCCGATTTTGGCCTAGCCCGAGAGATCAGCTCA CAACCACCCTACACTGAGTATGTCTCCACACGATGGTATGTGCCCTTGGCTTTTGCAATAGATATATCATGTCTCCGTGT GTTCGATACTCAATAACTAATATGGTGTGGCTTTTGAATAGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTCATCTATA TAACTCCAAAGTTGGTAAGTCTCTGATGTGGAATATTGATGTTGTGTATGATTTGCACTAGTATGTTTTTTGCAGTGATG ATGATGAGTACCATAGTATTTATTGATTTTTTTTTCCTTCTTTTAGACATGTGGGCAATGGGTGCTATAATGGCTGAGCT GTTATCTCTCCGTCCTCTGTTCCCAGGAGTCAGGTATTAGCTTCTCTCTTCTGCCCGCACAATTTCCTGTATGATGGTTC TTTTGAAGTGGATTTGTTTTAAGATTATTTTTCTATTTCCCCCCTTCAGATTACATCTCACTTATTTTCATTTGTCCTGA TAAGATTTTGAGACAATCAGACTCTGCAAAAGACTTGGCTTTTCTAGAAACTGTTATAGTAGCTTTTCGAAATAATATCT TACAAAGTTACAATAGATGAGAGAGTTCTATTTATAAGTTATAACTGTTATCAAACGCGAAATATCTTCTGCTGTAACAT AAAAAGATAACTTTAAATGCAACTTCAAAACATATTTTTAAGTTTATACAAAACGGAGGCAGAAAATATATCTTTATGGG GGAAATAATTGTAAGGCACTTAGTTGAGTTCTGAACAAATGTGGTTTTTTTTTATATGCTTCAAAGTAGAATCCTGCTCT ATAGTCCTTTTTAATACCTGGAAGTTGGAAATGAACATGTTCCTTAATTGCAACACATGCAGTGAAGCGGATGAGATTTA CAAAATATGTGGTGTGATAGGCAGTCCAACCATTGAATCATGGGCTGATGGACTGAGACTTGCAAGGGCTATTAACTATC AGTTTCCACAGGTTAGTTCAACTTTATTGACAATTTGACATTGGGTCGTGTTATTTTTGGTAGTTAGCTTTTGGGATGCA ATTGGCTTAATTAATATGTTGGGTATAACCAAGTGAGACAACATTGGCACTCTACTTAGCCCTTGACAGTTGACACTATA TGCCTTTTACTTATACAGCTTGCTGGTGTACATCTTTCTGCATTGATCCCATCTGCAAGTGATGATGCAATTAGCCTAAT CACAGTAAGTTTCTTCAGTGTATGGCTTAACAGCTTAGCCCTTTATCACATATCAACTAATAATGCTCAATGCATTTTCT GTGCTATTAATGCAGTCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCAGAGGCCCTTCAACATCCTTTCTT CCAGGTGATCTTTTAACTTGTTCTTGTTCCTTTTTCTACCTCTTTATTATTCTATAGTCTTTTTATTTTATATGCCGTGT TATTCAGACTTTTTTTTATTTGTTGTAGAGTTGCTTTTACATTCCTCCATCCCTTCGCACCAGAGCAGTAGCGAGAACTC CTCCACCTGGTTTGTGTTGTTTAACTGTTTTGTTAGCTGTAGACAAGCTTCGTGAATAATCATATGGAAGTAATTGTCTT TTTTTTCAGCTGCAACTAGAGGGGCACTGGATCAGCAGGGGGCTAAGAGATACTCCGGTGTTTTGCCTAATTCAAAGCTG ACCAATAATTTTTCTTCTCTGAAAGTGCATCCTTCCTTAGTTTCAGGTGATCTAATTGGTTTGATTTTTTTGAGTATGTG GAGAAAATTTTATCATTACAACAAGAACATAATAAAATGTTACTATTTTGCTTAATATTCTGCATAAATTAACTAAACAA TTACATTCAATAATTGAAAGATCATATTGTTCAGTTTACGAAAATTAGCTGCTTGACAGTTATTATTATAATTTTTTATT TTACTTTTACTATTTTTGCTTCATTTAGGTTCACGGCCGTGGCTTCCAATAGTAATGAACCTATCAAGTCTTGCGCTATG GAAACCAAAAATATGTCTTACCAATATAATAATTTTACTGCCATATTTATTTATAACCAACAGTTTAAGTCTGTTATTAC TTTCGGAATTGTACTTCTCAGATAAAATTTTATTTCTCAAACTCACGTTGATGTCATTAGCACCTAAAAATCTTGTATAC ATTAACAATGAAGTTGTGGAGGTGCACTTTTGGGTTAGGTTCTTAGATTTGGAATTGACGTTTTAGCTTGTCAACTAATA ATTGGAAAGACTGACAGAGCATAGACTAGTTATTTTCTGATTGCGTAGAATTGTTATATGGGATTATAGTTCTAATTCTG GAAGGGCTTCTGATCATAGGAATTGGAATTGATTGGCCCAATTCTAATTTCTAGCACTCTAGTTTCATGCTAATCAATAG ATGAGCTTTTCTCCATTGAATTATATCTATAATACCATAATGATTGAGCAGAGTTCTGATCTGCTTGTGAATTAATGTTA CAGGTGTCCAACGGAAGCTGGATATGGTAAATCAGGTGAGTTGTTCTTGCCACATCCCTCTTTCTGTCAAGCTTTCTGTT CATGAACCCTTTCTTTTTACCCCTTAACATTAAGAAAAACCAAATTATAATCCTCTTTCTCATAATGGTCGATTATTTTT AGTTTTGGTAAGCTGGTTCTTATCTTGAATTCCTCTATGTCATGCCAACAATTTTCATGGTTATGCTTTTGAAGGATGGA ATGAAGAAAGAGAATTCGATGAAGACTTCGATACAGTCAAAATATCGACAGCCAGGGAAGGACAGTCCAAGTAAGATTAT ACTCTAATGATCGGATAAAACTACTCTCAGATATTTCTTTGAAAGTGTTTTTTTTTAATATGGTCTTGTATTTATGTGAA GTCACTATGGTTGTGTTAGCAGCTTCTATGATCAAAGGGAGGGGGGTTTCCGAGACTACCGAGAGGTTGGCCAATATGTC TGTTGGTACTCGGAGACAGTCCATGGGGCAATCCCGTCCTCCAATGAAGGCTGGAGGAGTCAATTGGATTTCTGAATCTG GAAACTTCATGCTCAGGCCCGCACAACAGATTCCAACTGGAAGAACCTTCACAAGAAAAGTTGCCGGATGAAACCTCAAT GTTGTGAATGTCCTTTACAAGTATTAAAATAAATGTCGGTTTTGACATATTCTGATTATGACTCTGCAAGTCTTAAACTG CTCAAACTAGTATTGTTTGGCGTTGTTTGTAATCGTTTCGTACTATCTATTGTATTATTGGGCGTAGATGGCTTTGCTTA TACTTATGCTGATGCCTTTCTAGTTATATATATGCGAGCTTGTGATTGAAGGTTTCCCCTACTGTGGTGTGTGGATATTC TGTGTTGATTATGTCCATTTTCTTGCTTGTTGCGTTTGTACCTACTATCTGTCCTCGCACGTGTTGTACGTAGTGATGTT CAATGAAAATAGTTCACTAATCGACTCCTTGACTATAGAGCTGTGATTTTACCATGGCAGAACTGATTTAAAAGTGTAAG TAATATGTAAAATAACAATGGGTTAAACATTTGGGTTTAATGGATATGCACTGTCAGTGTAAAATAGTTTCACAGACATC CAATCAACATTTGCCACGTAGGAAAGAGAGTTACATTTGTTTTTAATTTTAATTAAAATAAAAACATATTTGCTTATTTG GCGGAATTCAA
CDS sequence (LotjaGi2g1v0342500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATATCTGAAAGTGCTGCTTTGTATTCCAAGGGCGCAATGGAGAGGTACACGATAATTAAGGAAGTTGGTGATGGAAC GTTTGGGACTGTCTGGAGAGCTATAAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACT CTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAACCACCCAAATATTGTTAAGCTGAAGGAA GTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTATATGGAATGCAACCTTTACCATCTTATGAAAGATAGGGA AAAGCTGTTCTCTGAAGGTGAAATTAGAAATTGGTGTTTTCAGGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGAT ACTTCCATCGCGACATGAAACCTGAAAACTTGCTGGTTACCAAGGATATTATAAAAATTGCCGATTTTGGCCTAGCCCGA GAGATCAGCTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTCA TCTATATAACTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTATCTCTCCGTCCTCTGTTCCCAG GAGTCAGTGAAGCGGATGAGATTTACAAAATATGTGGTGTGATAGGCAGTCCAACCATTGAATCATGGGCTGATGGACTG AGACTTGCAAGGGCTATTAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGCATTGATCCCATCTGCAAGTGA TGATGCAATTAGCCTAATCACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCAGAGGCCCTTCAACATC CTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCACCAGAGCAGTAGCGAGAACTCCTCCACCTGCTGCAACT AGAGGGGCACTGGATCAGCAGGGGGCTAAGAGATACTCCGGTGTTTTGCCTAATTCAAAGCTGACCAATAATTTTTCTTC TCTGAAAGTGCATCCTTCCTTAGTTTCAGGTGTCCAACGGAAGCTGGATATGGTAAATCAGGATGGAATGAAGAAAGAGA ATTCGATGAAGACTTCGATACAGTCAAAATATCGACAGCCAGGGAAGGACAGTCCAACTTCTATGATCAAAGGGAGGGGG GTTTCCGAGACTACCGAGAGGTTGGCCAATATGTCTGTTGGTACTCGGAGACAGTCCATGGGGCAATCCCGTCCTCCAAT GAAGGCTGGAGGAGTCAATTGGATTTCTGAATCTGGAAACTTCATGCTCAGGCCCGCACAACAGATTCCAACTGGAAGAA CCTTCACAAGAAAAGTTGCCGGATGA
Protein sequence (LotjaGi2g1v0342500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISESAALYSKGAMERYTIIKEVGDGTFGTVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKE VIRESDILYFVFEYMECNLYHLMKDREKLFSEGEIRNWCFQVFQGLAYMHQRGYFHRDMKPENLLVTKDIIKIADFGLAR EISSQPPYTEYVSTRWYRAPEVLLQSHLYNSKVDMWAMGAIMAELLSLRPLFPGVSEADEIYKICGVIGSPTIESWADGL RLARAINYQFPQLAGVHLSALIPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARTPPPAAT RGALDQQGAKRYSGVLPNSKLTNNFSSLKVHPSLVSGVQRKLDMVNQDGMKKENSMKTSIQSKYRQPGKDSPTSMIKGRG VSETTERLANMSVGTRRQSMGQSRPPMKAGGVNWISESGNFMLRPAQQIPTGRTFTRKVAG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 12 | 300 | 289 | 2.97E-95 | ||
| Gene3D | 13 | 96 | 84 | 1.8E-26 | – | |
| CDD | 17 | 296 | 280 | 0.0 | – | |
| PANTHER | 17 | 460 | 444 | 1.1E-210 | – | |
| PANTHER | 17 | 460 | 444 | 1.1E-210 | – | |
| ProSiteProfiles | 17 | 296 | 280 | 48.386 | ||
| SMART | 17 | 296 | 280 | 1.8E-104 | ||
| Pfam | 17 | 296 | 280 | 4.0E-75 | ||
| ProSitePatterns | 23 | 47 | 25 | - | ||
| Gene3D | 97 | 301 | 205 | 7.5E-66 | – | |
| ProSitePatterns | 134 | 146 | 13 | - | ||
| MobiDBLite | 372 | 397 | 26 | - | – | |
| MobiDBLite | 372 | 389 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0342500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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