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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0364600 |
| Transcript ID | LotjaGi2g1v0364600.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A0R0H303|A0A0R0H303_SOYBN V-type proton ATPase subunit a; Found in the gene: LotjaGi2g1v0364600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86205405..86212456) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCAAGAAAACTACGATTTCTCAAGGATCAGATCAGTAAAGCTGGTTTAATCTCTTCTCATTCCATCTTGCAATCAGA TATTTTCTTGGAGAATTTAGAGGTCCTTCTTTATTTTACTACTTTTTCCCTATCAATATGATCATTGTTCCTAGGGCTTG CATTTAATATTCATGTGTCACCCAAACAGCAATAACATGATGATGTCATTTTTGGTTTTTTCAGTTTCACCAGTATATAT GGGGGTTTTTACTCTTGAATCTGACATAGTTTTGTTGAATTTCTCTCAAAACAGATACATCTTGCTGAGCATGAACATGA AATAATTGAAATGAACTCCAACAGTGAGAAACTTCGGCAATCATATAATGAACTCCTGGAATTCAAAATTGTACTGCAAA AGGTATTTTTCTTGGCTATTTGTTTGTGATTAACATATTATCTTGTTACTTTTAAATTATTAGAGGATTCCTCATGCTCT TTATTATTTTGGTTACAGTAGTTTTTCCGGCTTGAATCCAGTTAGCCAATAATGGTCTTTCTGATCATAACTTAACCTTA GTTACTGGAGTGTTTAGTTCAGCTGTTGCTCTACTGTATTTCTGATTTTAATCTATTCCGTCAAATAATAACGATTTTTG GTTCAAAATTATTAATTCAATCCTGCTCTTGAAATGTAAAATATTTCCTATTTCCTATATGCTTTCTTCATGCACCGTTC GTATCATATAAGTTTGTTGGTATATTTCAGGCATGTGGTTTTCTTGTTTCAAGTCATGGCCTTGCTGTTTCAGAAGAGAG AGAACTAGAGGAGAATGTTTACTCAAATGGAGACTATGTTGAGACACCATTTTTGTTTGAACAGGTTCCTTGTAATATCC CTTATAGCCATAGACACTTTTCTTCTGTGAAAAGTTTAAATTCTGTCAGTAGTTTTTCAATTTTATTTTATCTTGTGAAG GCACTATGATAAATTGTTTATTTTACAGGAAATTAAGCCTGAACCATCGAATCAGTCTGGTTTAAGATTTATCAGTGGGA TAATTTGCAAATCCAAAGCTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCA TCAGCTGATGAACAAATTGTGGACCCTATTTCAACTGAGACGGTCTGTAGTTATTATTATCTGTATTTAATTTATTATTA CTCCAACCAATCCTGTACCCAGTTAGTTTATTTTCTCACCAATTTATTCTCTGTCCTGATGACTCAAACTCATGACCTTC TTTTCAGGTTGAGAAAACTGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACGAAGATTCTGAAAATTTGCGACG CATTTGGAGCAAATTGCTACCCTGTTCCCGAAGATATAAGTAAACAGAGGCAAATAACTAGGGAGGTAAATATCCTCAGC TTAAGAATATGTTATCTTTTCTTCTTCAATCATGTATATTTTTGTATTATAAGTTATAACATTGGGGCCAAGCTTGCACT AGTCTCTAGATATAAGCGGGCATTTTCCACCTACATTTTCAGCGGAAAAAAGTAATAATTTGTTGTTTCTAAGTTACATA TTTGGGAACTTCAACATGTTAATATCAAATTTTTTAATATTCAGATATCTTCTGCAATCCAAGAGACTTTCTTTCTATAC TCATTAAGATTTCAGTGTGCAGTGCCATTATTTTTTAAGGGAGATGTTTTCCAACAATATCATTCACGAGAGCATTGAGC AGCGTCGAACAGGAAAAAAAGAGCTGTGTTCATTGAATCAAATCACCCTTACCTTTTCCTTTAGGTTATTGACGTTGCTT TATGTCATTACATGTCACCATTGTTAACTGTAAAAATGGGAAGTTGGAAACAGTTGAAATTACAAGGCTAATATAGAGAA TGAAGGAAAAGAGGAAATAGAGCCTGAATAATCTGATAATGATATTGATTTGATGTGGTACAAAAAACATAGCACTAACC CCTATTTATATGAATACTTGGCTGAGGCTCAATCCTAATTAAACAGGGAAATAAATCAATGAAGTCGATGGAAATATTAA AACCATTCCTAAGAGATATACAAGATACAACAATGATATTATGAGATATTTTCTAGGTATTCTAACAGAAACTACATGAT TTATAGTGGAAGAATATAGTTGACACCTTTATGGTTACAGGTTTCATCACGTCTTGCTGACTTAGAAGCAACTTTGGATG CTGGGATTAGGCATCGGAATAAGGCTCTATCTTCTTTAGGAGGTCAATTACCAAAATGGATGGACATGGTAAGAGTTAGC ATCTCAATCTCTTATTTGAGATTTTCTTGTTCTTTGTTATGTAGCTTCAGAGCACTCCTAATATCTGATCACAGTTTGTT AGTGATGGATATATATTTTGAACCAATAGCCTATCATACTTGTTATCTTGCCCTAGGTAAGAAGAGAGAAGGCTGTCTAT GATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGCTGGTGTCCAATATTTGCAAAAGT ACAGGTAACTTTTTCCTCCTCAAATTTGCTGGATCCTCACTAACTCCTTTGTACTTATTTTTTGTGGAGTTGAAAACATC TTTCATCTTTGATTTATATTTCCTGAAGAGATTGCATCTTCTGGTTTTACAGATTCAGGAGGCACTGCAACGTGCAACTT TTGACAGCAATTCTCAAGTGGGCATAATCTTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACTAAC AGTTTCACAAGTCCATATCAAGAAATTGTTGATGCATATGGGTGAGCCTAATATTCACTAGGTGTATTAGGCATTAATAG TACTACAGATGAGTTAGTAGTTAGTTTGTTGAAATAAATTACTTTTCACGAAGTTAGAAGTACATGGCAATGTTCTGTGA ACTTGTCACTAGATCAGTAAATGTATGATTAATTAAATAGAATTGGTTTTAGGACATTGCTCTTATCTTGCAGTTATGAA AATTGAAAAGACTCCTAATGATTAATGAGCCCTTTTACTCATCAGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTT ACACAACTATGACATTCCCATTTCTTTTTGCGGTGATGTTTGGAGACTGGGGTCATGGAATTTGCCTACTTCTGGGAGCA TTGGTTCTTATAGCACGTGAAAGAAAGCTCCGCACTCAGGTAATTCCATTTTGTGACATGAATAAAGTAGTAACAAAAAG ATTATTAAAAAATGCCATAACAGGCTTGTGATATCTACTATGGTTAATCTTCTTTGAGAAAGGCTTACTTGATTTTATAT CAAATTTGATCATTCTTTCCCTGTATGGTATTTAATAGGGTCATCATAGTGGTGTTCAAAGTTGAAGCACTGGGTGTTTT CTATGATATACCCATTAGACACCACGATAATTAGATGGAACTTTTTTGGTATTTATTGAGTTTGTCCTTTTTTTTTTTAT AAATGTTATGAGTTTGTCCTTTAATAGTTTGAATTTTGTCATAAACCAATTATCCCAAAAGCTTAAGTTGTTGGGTAAAT GACACGTGATTGATTATATTTCCAACAAATTTACAATGTATTATGGATACAAGTGTAAACAGAGACATAAATCCTTTACT TTTGTTCTGCTCTTGGCATTCGAAGTTAACATCTTAAACAATCTATTTGATTTATGCCAGCGACTTGGAAGCTTTATGGA GATGCTATTTGGTGGGCGCTATGTGCTGCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTTATCTACAATGAATTCT TCTCTGTTCCGTTTCACATATTCGGTGCGTCTGCTTACAGATGCCGAGATAGTTCATGCAGGTGTCTTCTATTTGTCTTT TAACAGCTATGATTTATGTGCCAGTTGATTGTTTTTTTACCCAGTACTGTATGCACAATGTAATATTTGTTGGTGTTTTA TTTTGCCTCTTCTATTTTTTACTAATTTGAGTTGACATTAACATTGATTATTTTTATCTGTTTGTTGAGAACTCTTTTAT TTATAAAAAGGAGAAGGTTAGAACTTACATACCTTAATTGCTGCTCTTCTCTTCTCTTCTGCATTGTCTTTACTTCTTGC ATCTGTGCATTATGAACACCAATGAGGTAAAGATTCATCTTACATTCAACTTTTTCACTTCAATATGCCATCTGAGCAGT TAGCACAGGTGGTTGGGATGGGTGGATTTTGGGTAGAGTTCATAACTTCAACTATTCATGTCATGGTAATGACTCCTTTA AGTATTACCAAATTCTAATTCAAATCATTCTGCTACTCTAGAGTTGTAGACCACCATAGCGGAAATAATCTTTTTCATCA AATGCATTTATCTGCTGTAAGCTGTCTGAGAGATGTATTAACATCTGACATTATGTCTGTTACCATTAAAATAAAAACTG AAATGGTTATTTATTTGAACTGATTCACTTTTCTCTTAAAGTTATTTACCTTTAAATCCATGTAATCTACTCATTTGATT GCCATCTCTTGCAGTTGCACTCTTCTGTTGTGCTTTCTGTCTATACTATTTTTCTCCTTCAAAATTGTGCTAATTTGGGT ATTTGTATTGTCAGAGGATGTATATATTGGAATCTTGTTTTTGGCTAGGTTTTAACTTGATGCTGTGTGATAACTTTTAT CGCTCTCTACCCTTTATCAGGGATGCACATACCACTGGCTTAGTAAAATACCGAGAACCATACCCATTCGGTGTGGATCC CAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCCATTCTGTTCGGTGTGGTGC ATATGAACTTAGGAATTATATTAAGCTATTTCAATGCTCGATTCTTTGGCAATTCACTTGATATAAGGTATCTCACTTTT CTAACTTCCCTCTTCTTCTATATTTTACTGTCTGAGTAGAATGCTTTAACTTACTCTTCATGTTGCTTTTAGGTACCAGT TTGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCTCTTCTCATTGTTGTCAAGTGGTGTTCTGGCTCT CAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCCTTTGACAACCTTGGTGAGAATCAGTTGCTCTGGGG CCAAAGGCCACTTCAAGTATGGTTCTAGTTCTTTTCTTCATTGTTGCTTGATGCATGTTCTATTTTTTGGCTTTCATCCT CCTGAATCTGTTCATCATAAGCAGGTTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACC TTTTATACTAAAGAAGCTTCATAATGAGGTACCTCTTTTGCTCCACTTGTATATGATTTTAAACGTCTATAATTTTATTC ACCAAAGACCGAACTTCTTGATTAAATGCAAATAAATATGTCTCCGTCCATTACATAAATATGCTTGTTCGTTTGAGCAT CCCCTTTGGCCTTTATGACTACATTTCTGCTTTAGGTTACCAAACTTCAATCCTCCTAGAGATCCATTATATGATCATTT TTCTTTGGACTAAAAAATGCTAGTTCTAAATTTTAAATTACTGACAACTTCAATTGGTTGAGCAATTTTTTTTTCTTTTC TATTCTAGCTGTAGTTTCTTTTGTATACTTTTGTTACATCTGTTTATTCACGAAGCAATGCTAAGTAGTTTGTGAAGATT ATTAATCTTCTATCCTGATGTTATTATAGAGATTTCAAGGACGTACTTATGGTGTGCTTAATACCTCTGAGGTGGATCTT GAGACGGAACCAGATTCTGCCCGGAAACATCACGAGGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATTCACTC TATCGAGTTTATTCTGGGTTCTGTTTCTAATACAGCATCATATCTTCGACTATGGGCATTAAGGTTTGATCAGCCATGAT TTTCCTTCATTGCCACAACTTCCTGTTTTATAAATTCTTGATTTGCTCGACTTTTTGTGACCACTCTGCAGCTTGGCTCA CTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTAAGTTTGATTTATAAGTTATAACCTTC ATATGGCATACTTTTTATTCAACCTTCATATGGCCCCTGATGTGCATCCCATAGTAGAGGATCTATCGTTTATAGTCAAA GTTGGATTGAATGTTCTTTGTGCAATTTCACCGAGAGCACTAAATCATTTGGCTGAGATGAATAGTGTTCTGATATTTTT ATCATTTGAAATAATGATGAAGACCCTGACAAGTGACAATAGATACAGTCAAAATATGAATAATCATCAAATTCCTTAAC TACGTTATTATTTTAAACTATAGAGTAAATTCTTTAATCGATTCTCCAAAGATTAGGGTATCACCTGTTAAGTCTTCTAG TTTCTCCAATATTCAAGTGCTACCAAATTAATCCCTCAATGATACAAAGTTGCTACTAAATTAGTCCTGTGTATGAGGGA GGCTAATTTGGGGCCTTAAGTACTAAATAAGCTCCACTTATTTAGTGCATTTTCCCATATACTTGAGGGACTAGTTTAGT TAAAAAATTGAAGTTATAATATGGTACGTTGGTAACACTTGAATCTTTGAGGAATTAATTAGTGACTAAAACCTCTGTCA TGTCTGCATTCCTTTGTTTAGTCTTTAGGCTAAAAAATTATCCATCTATTATGTTTGCATTCTGTTGCAGCATTTATCCT TTTTAGTCTGTAATCATGTATGTCATTGTGGACTGCAATTATGACAGGTATGACAATCTTGCCATTCGGTTCGTGGGGCT AGTTGTTTTTGCTTTTGCAACTGCCTTTATACTACTTATGATGGAGACTCTGAGCGCTTTTCTTCACGCCTTGCGTCTTC ACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTTAAGCCTCTTTCCTTTGCCTCCTTAATTGAG GATGAAGATTGA
CDS sequence (LotjaGi2g1v0364600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAGAAAACTACGATTTCTCAAGGATCAGATCAGTAAAGCTGGTTTAATCTCTTCTCATTCCATCTTGCAATCAGA TATTTTCTTGGAGAATTTAGAGATACATCTTGCTGAGCATGAACATGAAATAATTGAAATGAACTCCAACAGTGAGAAAC TTCGGCAATCATATAATGAACTCCTGGAATTCAAAATTGTACTGCAAAAGGCATGTGGTTTTCTTGTTTCAAGTCATGGC CTTGCTGTTTCAGAAGAGAGAGAACTAGAGGAGAATGTTTACTCAAATGGAGACTATGTTGAGACACCATTTTTGTTTGA ACAGGAAATTAAGCCTGAACCATCGAATCAGTCTGGTTTAAGATTTATCAGTGGGATAATTTGCAAATCCAAAGCTCTTA GGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCATCAGCTGATGAACAAATTGTGGAC CCTATTTCAACTGAGACGGTTGAGAAAACTGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACGAAGATTCTGAA AATTTGCGACGCATTTGGAGCAAATTGCTACCCTGTTCCCGAAGATATAAGTAAACAGAGGCAAATAACTAGGGAGGTTT CATCACGTCTTGCTGACTTAGAAGCAACTTTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTATCTTCTTTAGGAGGT CAATTACCAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTCTATGATACACTGAACATGTTAAATTTTGATGTCAC AAAAAAATGTCTCGTTGGAGAGGGCTGGTGTCCAATATTTGCAAAAGTACAGATTCAGGAGGCACTGCAACGTGCAACTT TTGACAGCAATTCTCAAGTGGGCATAATCTTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACTAAC AGTTTCACAAGTCCATATCAAGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTACAC AACTATGACATTCCCATTTCTTTTTGCGGTGATGTTTGGAGACTGGGGTCATGGAATTTGCCTACTTCTGGGAGCATTGG TTCTTATAGCACGTGAAAGAAAGCTCCGCACTCAGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTG CTGCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTTATCTACAATGAATTCTTCTCTGTTCCGTTTCACATATTCGG TGCGTCTGCTTACAGATGCCGAGATAGTTCATGCAGGTGGATGCACATACCACTGGCTTAG
Protein sequence (LotjaGi2g1v0364600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRKLRFLKDQISKAGLISSHSILQSDIFLENLEIHLAEHEHEIIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSSHG LAVSEERELEENVYSNGDYVETPFLFEQEIKPEPSNQSGLRFISGIICKSKALRFERMLFRATRGNMLFNQASADEQIVD PISTETVEKTVFVVFFSGEQARTKILKICDAFGANCYPVPEDISKQRQITREVSSRLADLEATLDAGIRHRNKALSSLGG QLPKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKVQIQEALQRATFDSNSQVGIIFHSMDALESPPTYFRTN SFTSPYQEIVDAYGVARYQEANPAVYTTMTFPFLFAVMFGDWGHGICLLLGALVLIARERKLRTQRLGSFMEMLFGGRYV LLLMSLFSIYCGFIYNEFFSVPFHIFGASAYRCRDSSCRWMHIPLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 442 | 442 | 9.8E-274 | ||
| Pfam | 1 | 435 | 435 | 2.3E-138 | ||
| PANTHER | 1 | 442 | 442 | 9.8E-274 | – | |
| Phobius | 1 | 352 | 352 | - | – | |
| Coils | 30 | 57 | 28 | - | – | |
| Phobius | 353 | 376 | 24 | - | – | |
| TMHMM | 355 | 377 | 23 | - | – | |
| Phobius | 377 | 396 | 20 | - | – | |
| TMHMM | 394 | 416 | 23 | - | – | |
| Phobius | 397 | 415 | 19 | - | – | |
| Phobius | 416 | 446 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Proton transmembrane transporter activity | Enables the transfer of a proton from one side of a membrane to the other. | ||
| Cellular component | Proton-transporting V-type ATPase, V0 domain | A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi2g1v0364600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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