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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0372000 |
| Transcript ID | LotjaGi2g1v0372000.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT5G02500.2 heat shock cognate protein 70-1; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|A0A0E0HFK2|A0A0E0HFK2_ORYNI Uncharacterized protein; Found in the gene: LotjaGi2g1v0372000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86876901..86879268) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGGTAAAGGTGAAGGTCCGGCGATCGGAATCGATCTCGGAACGACGTACTCCTGCGTCGGCGTTTGGCAGCATGA TCGTGTTGAAATCATAGCTAACGATCAGGGTAACAGGACTACTCCGTCCTATGTCGCTTTCACAGATACTGAGCGGTTGA TCGGAGATGCCGCCAAGAACCAGGTCGCTATGAACCCTACCAACACTGTTTTCGGTAAGTCCTAGTTCTTTCTCTTCCAC ATTGCTCTTCTGCAATTCCATTGAGTCTGTTAAATTTTTTATTATTATGATTTTGATTTTATTTTATGATAATTTAGGAA ATTATGAGACGTTGTAGATTTATAATTGTTATGTGGTTTGATCGTGTATCTGTAGTTCTGTACAAATTGATTTTCTCCAA TTTTACTCTGTTTCAGTGATTCTATAGCTCACAAATGCATTCAATATTGTTGTGAATTTTGCAGTTTGTTTATGTGCTAG CTAGTAGTTATGAGATTTGATTGTGCTTCTTAATTAGAGTTTGAATTGCAGCTTCCAATTCATTGTTATGATGCTTTTTT TAACTGAGTGAAAAATTTGGTGTTGTGTATGGTTTTGGTGATGATGTTGGTTTGATTTTGCGTGTGCAGATGCTAAGCGT TTGATTGGAAGGAGGTTCAGCGATACTTCAGTGCAGGGTGACATGAAATTGTGGCCATTCAAGGTGATTCCAGGCCCTGC TGACAAGCCAATGATTGGGGTGAATTACAAAGGAGAGGAGAAGCAGTTTTCTGCAGAGGAGATATCTTCAATGGTTCTCA TGAAGATGAAGGAGATTGCGGAGGCGTATCTTGGTACAACGATTAAGAACGCGGTGGTTACTGTGCCGGCTTACTTCAAC GACTCTCAGAGGCAAGCTACCAAGGATGCTGGTGTGATTTCTGGGCTCAATGTGATGCGAATCATCAACGAGCCTACCGC GGCGGCGATTGCGTATGGGCTTGATAAGAAAGCCACCAGCACCGGGGAGAAGAATGTTCTGATTTTCGATCTCGGTGGTG GGACTTTTGATGTTTCGCTTCTCACCATTGAGGAAGGTATCTTTGAGGTGAAATCCACTGCTGGTGATACTCATTTAGGG GGTGAGGATTTTGATAACAGAATGGTGAACCATTTTGTTCAGGAGTTTAAGAGGAAGAACAAGAAGGATATTAGTGGAAA TGCCAGGGCTCTTAGGAGGTTGAGAACAGCTTGTGAGAGGGCCAAGAGGACTCTGTCATCCACTGCTCAAACCACCATTG AGATTGATTCGTTGTATGAAGGAATTGACTTTTACACCACCATTACTCGTGCTAGATTTGAAGAGCTGAACATGGATTTG TTCAGGAAGTGTATGGAGCCTGTGGAGAAGTGTTTGAGGGATGCAAAGATGGACAAGAGTACAATCCATGATGTTGTTCT TGTTGGTGGGTCAACAAGGATTCCCAAGGTTCAGCAGTTGTTGCAGGACTTTTTCAATGGGAAGGAGCTTTGCAAGAGCA TTAACCCGGATGAGGCTGTTGCTTATGGTGCTGCAGTTCAGGCTGCGATTTTGAGCGGTGAGGGCAATGAGAAAGTGCAG GATCTTCTCTTGCTTGATGTCACTCCACTTTCACTTGGATTGGAAACTGCTGGAGGGGTCATGACTGTGTTGATTCCCAG AAACACAACTATTCCCACCAAGAAGGAGCAAGTTTTTTCAACCTACTCTGATAACCAACCTGGTGTTTTGATTCAGGTCT ATGAAGGTGAACGAACAAGGACTCGTGATAACAATTTGCTTGGTAAATTTGAGCTCTCTGGAATCCCTCCAGCTCCAAGG GGTGTTCCACAAATCACTGTCTGCTTCGACATCGACGCGAATGGTATCTTGAATGTGTCCGCGGAGGACAAAACAACTGG ACAGAAGAACAAGATCACAATTACAAACGACAAGGGGAGGCTTTCGAAGGAGGAGATTGAGAAGATGGTGCAGGAAGCTG AGAAGTACAAGTCCGAGGACGAGGAGCACAAGAAGAAAGTGGAGGCTAAGAATGCTCTGGAGAATTATGCCTACAACATG AGGAACACGATCAAGGATGATAAGATTGCTTCCAAGTTGTCAGCGGATGATAAGAAGAAGATTGAGGATGCGATTGACCA GGCTATCCAATGGCTCGATGGGAACCAACTTGCTGAGGCTGATGAATTTGAGGACAAGATGAAGGAGTTGGAGACCATTT GCAATCCCATCATTGCTAAGATGTACCAAGGTGCAGGTGCTGATGTGGGTGGTGGAGCCATGGATGAGGATGGTCCTCCT GCTGGCAGTGGAAGTGGTGCTGGACCCAAGATTGAGGAAGTCGATTAA
CDS sequence (LotjaGi2g1v0372000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGTAAAGGTGAAGGTCCGGCGATCGGAATCGATCTCGGAACGACGTACTCCTGCGTCGGCGTTTGGCAGCATGA TCGTGTTGAAATCATAGCTAACGATCAGGGTAACAGGACTACTCCGTCCTATGTCGCTTTCACAGATACTGAGCGGTTGA TCGGAGATGCCGCCAAGAACCAGGTCGCTATGAACCCTACCAACACTGTTTTCGATGCTAAGCGTTTGATTGGAAGGAGG TTCAGCGATACTTCAGTGCAGGGTGACATGAAATTGTGGCCATTCAAGGTGATTCCAGGCCCTGCTGACAAGCCAATGAT TGGGGTGAATTACAAAGGAGAGGAGAAGCAGTTTTCTGCAGAGGAGATATCTTCAATGGTTCTCATGAAGATGAAGGAGA TTGCGGAGGCGTATCTTGGTACAACGATTAAGAACGCGGTGGTTACTGTGCCGGCTTACTTCAACGACTCTCAGAGGCAA GCTACCAAGGATGCTGGTGTGATTTCTGGGCTCAATGTGATGCGAATCATCAACGAGCCTACCGCGGCGGCGATTGCGTA TGGGCTTGATAAGAAAGCCACCAGCACCGGGGAGAAGAATGTTCTGATTTTCGATCTCGGTGGTGGGACTTTTGATGTTT CGCTTCTCACCATTGAGGAAGGTATCTTTGAGGTGAAATCCACTGCTGGTGATACTCATTTAGGGGGTGAGGATTTTGAT AACAGAATGGTGAACCATTTTGTTCAGGAGTTTAAGAGGAAGAACAAGAAGGATATTAGTGGAAATGCCAGGGCTCTTAG GAGGTTGAGAACAGCTTGTGAGAGGGCCAAGAGGACTCTGTCATCCACTGCTCAAACCACCATTGAGATTGATTCGTTGT ATGAAGGAATTGACTTTTACACCACCATTACTCGTGCTAGATTTGAAGAGCTGAACATGGATTTGTTCAGGAAGTGTATG GAGCCTGTGGAGAAGTGTTTGAGGGATGCAAAGATGGACAAGAGTACAATCCATGATGTTGTTCTTGTTGGTGGGTCAAC AAGGATTCCCAAGGTTCAGCAGTTGTTGCAGGACTTTTTCAATGGGAAGGAGCTTTGCAAGAGCATTAACCCGGATGAGG CTGTTGCTTATGGTGCTGCAGTTCAGGCTGCGATTTTGAGCGGTGAGGGCAATGAGAAAATGGTGCAGGAAGCTGAGAAG TACAAGTCCGAGGACGAGGAGCACAAGAAGAAAGTGGAGGCTAAGAATGCTCTGGAGAATTATGCCTACAACATGAGGAA CACGATCAAGGATGATAAGATTGCTTCCAAGTTGTCAGCGGATGATAAGAAGAAGATTGAGGATGCGATTGACCAGGCTA TCCAATGGCTCGATGGGAACCAACTTGCTGAGGCTGATGAATTTGAGGACAAGATGAAGGAGTTGGAGACCATTTGCAAT CCCATCATTGCTAAGATGTACCAAGGTGCAGGTGCTGATGTGGGTGGTGGAGCCATGGATGAGGATGGTCCTCCTGCTGG CAGTGGAAGTGGTGCTGGACCCAAGATTGAGGAAGTCGATTAA
Protein sequence (LotjaGi2g1v0372000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRR FSDTSVQGDMKLWPFKVIPGPADKPMIGVNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQ ATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFD NRMVNHFVQEFKRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCM EPVEKCLRDAKMDKSTIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKMVQEAEK YKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDQAIQWLDGNQLAEADEFEDKMKELETICN PIIAKMYQGAGADVGGGAMDEDGPPAGSGSGAGPKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 393 | 390 | 0.0 | – | |
| PANTHER | 4 | 393 | 390 | 0.0 | ||
| SUPERFAMILY | 8 | 191 | 184 | 2.15E-69 | ||
| PRINTS | 8 | 21 | 14 | 1.6E-64 | – | |
| CDD | 9 | 387 | 379 | 0.0 | – | |
| Pfam | 9 | 389 | 381 | 4.3E-182 | ||
| Gene3D | 10 | 384 | 375 | 6.3E-178 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 36 | 48 | 13 | 1.6E-64 | – | |
| PRINTS | 58 | 66 | 9 | 1.6E-64 | – | |
| Gene3D | 71 | 118 | 48 | 6.3E-178 | – | |
| PRINTS | 146 | 166 | 21 | 1.6E-64 | – | |
| Gene3D | 192 | 371 | 180 | 6.3E-178 | – | |
| SUPERFAMILY | 196 | 388 | 193 | 2.0E-70 | ||
| ProSitePatterns | 203 | 216 | 14 | - | ||
| PRINTS | 209 | 219 | 11 | 1.6E-64 | – | |
| Gene3D | 235 | 312 | 78 | 6.3E-178 | – | |
| PRINTS | 337 | 353 | 17 | 1.6E-64 | – | |
| ProSitePatterns | 340 | 354 | 15 | - | ||
| PRINTS | 369 | 389 | 21 | 1.6E-64 | – | |
| Gene3D | 386 | 489 | 104 | 1.2E-38 | ||
| Coils | 391 | 411 | 21 | - | – | |
| PANTHER | 392 | 498 | 107 | 0.0 | – | |
| PANTHER | 392 | 498 | 107 | 0.0 | ||
| Pfam | 392 | 488 | 97 | 2.9E-11 | ||
| SUPERFAMILY | 413 | 492 | 80 | 5.89E-31 | ||
| MobiDBLite | 491 | 520 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0372000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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