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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0372500 |
| Transcript ID | LotjaGi2g1v0372500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp|Q94B55|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr|I1LK31|I1LK31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0372500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86941085..86944880) extracted from Lotus japonicus Gifu genome v1.2.
CAGCAAAATGTGTGACCACAACACCAACCAGTTCCTTCCAGTCTTTCTTTCTTTCTTTCTACGCTGACTCGAAACCCGAA CCCATAGCTCACCCTTTTGATTAAACAAACCATTTTATTTTTACCATTCAAAGTTCAAAGTTCAAAGTTCAAACAACAAC ACTCCCCATTAACCAGTTTGAACCTGAAGCGTTGGATCAATGGAACAAAAAGTGGATGCTATTAATTTCAGAGTTTTCGG GATGCTACAGACTGACTACCCTTTGTGTTTGTGGGAATCAATCTGATTGATGCCACAATATCCATCTTACTCTCTCATCA CTGACACATTCATCAGCTACCCACACCCCTGTCTCTGTTTTCTGTTCTTCTTCCTCTCTCTGTTTCCCTCTCTCTCTCTA CGGTCCCGGGCTTCAAATGTGGAAAGTTTGAATTCAAAACGTGCAGGCCACCACCGTCTCTCTCTGGCAAAGGTGGCGCA GTCAGGGAAGTGAGAAGAAGAGATAGAGTGATGGGTCAGGGGCTGAGTTGCAGAGGGAGCCATGAACATGGACTCTTCCG TGCTGTTCAGCATGGGGACCTTCAAACTGTTTCCACTCTTTTACAGACACATCCAGCTCTCATGCATCGAACCACTGTCT ATGACCACCACTCTGCTCTTCATATTGCCGCTGCCAATGGCCAGATCCAGGTGGCTTTTCATTTTCATTTTCATTTTCAT TTTCATTTTCACTTGTGGGGTCTGAAAATTCATGTCTCTATCCTCACATTTTTCTGGCTGCAAATTGCAGGTTCTATCTA GGCTTTTAGATGGATCTGCGAATCCTGATGTGTTGAATCGCCAAAAGCAGGTCGCTTTTTGCTTTTATTCCTGATTTTGA ATGTGGCATTTGTTGTCTTTTTTATTTTGCCTCACTGATTTAATTTCATTGCATTTGAATGATTCAGACCCCGCTTATGT TGGCTGCAATGCACGGAAAAATTGCTTGTGTGGAGAAGCTTCTTGAAGCTGGGGCTAATGTATGTGACATTTCCTGAGAT GTTAATTCATTCCAATTTTCTGAAATATTTGTTATTTGATGATAATGGATTTTATTAAATAAAACTTCAGGTATTAATGT TTGATGCTGGTTATGGAAGAACCTGTTTGCACTATTCAGCCTACTATGGTCATTCTTCATGCCTTAAGGCAATTCTTTCT GCAGCTCAATCTAGTCCAGTGGCAGCTTCTTGGTTGGTCCTTTTTCTGTTTTAGCATTTCAATTCATGTGGGTGTTTTCT TATTTTCTTTATGATGCTTATTGATACAGAAAAGAATTCAATTAATTGCAGGGGGTTTGCTCGGTTTGTGAATGTTAGAG ATGCTAGGGGTGCTACCCCATTGCACTTGGCGGCTCGTCAAAGACGGCCTGAATGTGTGCATATTCTATTGTGCAATGGA GCTCTTGTTGGTGCCTCAACTGGCAGATATGGGTAATAATTTGTCTAGGTTCTGGTGTTGGATTTGATGCATTCATTCAT TTGTTCTATGGATTATTAGTATTGATACATTGCAATTTGCAGCTGTCCTGGGAGCACTCCTCTTCATCTAGCAGCCAAAG GAGGGTCTCTGGATTGCATCCGCGAACTATTGGCATGGGGTGCAGATCGTCTTCAACGTGATGCATCCGGGTACAATATA GTTTCTACTTTCTAGATACAATTTATTAACCATGCGGAGAAGATTTCATTGAGTGTATAACTTCATGATGATTGATGCAT ATCTAAACATGTATTTCATTTTCTTTGAAATATATGTAGCTTAATCATAATGAGTTTGCTTACTAGGACATTGATTGTAG TAATGAAATGTATGCTTATTTGACAAATATTATCAATTGTGTTGATTATCCGTCCTGGATTCCCTCCCATTTGGTGCTTT GCCTGTGCAACTTTTCTAAAAGAGAAATGAGAGACTAAGAGAGATGTGAGTGATTATTTGATGAAGAAGAAAGAGAGAGA TAGATAGAAGAAGATAGGAGGCAAAAGTGAGTGTATGAATATAATTTCGCAGAAAGGAAAATTAGAAGTGTTAGACTCCT GAGAGAGTAAGTGAACTTATTTAGGAAGCACCTTCCCCTCATCTAACAGTGTATTCATTCATGTATGTAGAACAAAATCT TATATTTGACTAGCAATGTTTTATTCAGCTGTAGGTTTTGGAATTTCTGAAATTTCCTTCATACTTACATTGTGTTTATG CAGGCGGATACCATATGTAGTTGCTCTGAAGCACAGACATAGTGCATGTGCAGCATTGTTAAATCTTACAGCTGCACAGC CTCTTGTCTGGCCATCATCTTTGAAGATCATCAGTGACCTCAATCCAGATGCCAAAGTTTTACTAGAGCGAGCCTTGATG GACGCGAACAGGGAAAGGGAGAAAAAGATATTCAAAGAGAGTGCTTACTCTCTTCCATCTCCATCGCACTCTGATCAGAT AGATGACAATATCTCTGAGGTAATTTCACACCCTTTAAATTCATACCAACTTCTTTTAGTTTACTACTTTTCTTAGATGT TATTGAATTTAGTCATGGAGATATATAGTTCCTGAGGACTCATAAAATTTACCAGGTGTATACTTATAGTGGGTTCTAAT GTAATTCAGGTTAGTGAGACTGAACTATGCTGCATTTGCTTTGAGCAAGTGTGTACAATTGAAGTCCAAGAATGTGGCCA CCAAATGTGTGCAAAATGCACACTAGCCCTCTGTTGCCACAACAAGCCTAACCCTTCTACTTCTTGTCCTATCCCACCGA TTTGTCCGTTCTGCCGAAGCACCATAGCTAGACTGGTGGTTATCAAGATAGAAAGTCATGATGACATTGATCAAGATGGT TGTGTTGATATCTCTTGTTCCAATCCAAGCAAGTCATGGAAGTTCCGGAACTTGAACGAGGGTGGTAGCAGCAGTTTCAA GGGACTATCATCCAGTGTAAATTCATTTGGAAAGATGGGTTGCCGCAGTTCAGGAAGGGTTGAAGTTGAAGATGAGTGGG TTGATAATAAGCCACAATGATGACGACGATGATGATGCCTGGTGTGATTCTTATGCTTATTATCAATTATATTTGCATAT TGGTAATATGTGGTAATGAGTTGCTTGATAGAATGTTAGGCAAGGCAAAATGAAAGCATAAAGAGAAGGAGTTTGATGTA AGATTGAGAACCAAGCAAAGTAAGTTAAGTTAAAAAGTGTTGGTGGGGGGAGGAGTTACATCATGACATCTGAGCTGTGT TACTTGAAAATGAAGAAGCATCGCCTGTTGTCAATGATAGTATAATAACATGTTTGGATCCGCTTCTCTTTCATTATAAT CCATTCTGAAAACCAGATCCTTCTCATTAGAATTGATTCTGGCTTCAGAATCAATTGTAGAAGGGTTTCCAAACATGTAC TAAGTAATCCTGTGAAGTGAGAAAATATTTTTCTCATTGATTAGAGTCTAAGTATAAGAACATGTGAAAATGTATTTGTG TATTTGCTTCTGATTTGTTGAACTGTGACAAAATGAGCAATAAAATATGAAAGGGAAAGACATGGCTTGTTGTTGGTTGT CATGTGATTCATGTGATAATGTCGGGGTCAGTTGAATAATTTGTGCAGTGCCCATACAGAAGGAACCTTACAATTAATAT AAACATAATCCAGACAAAGTTCATGTGCTATGCTCACCTGCATCTGACTTTATTGCTAGGATCCAGATAACTAGTTGACA AGCAGAATTTGCACTATCTATACAATTACTGTGAAT
CDS sequence (LotjaGi2g1v0372500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCTATCCTCACATTTTTCTGGCTGCAAATTGCAGGTTCTATCTAGGCTTTTAGATGGATCTGCGAATCCTGATGT GTTGAATCGCCAAAAGCAGACCCCGCTTATGTTGGCTGCAATGCACGGAAAAATTGCTTGTGTGGAGAAGCTTCTTGAAG CTGGGGCTAATGTATTAATGTTTGATGCTGGTTATGGAAGAACCTGTTTGCACTATTCAGCCTACTATGGTCATTCTTCA TGCCTTAAGGCAATTCTTTCTGCAGCTCAATCTAGTCCAGTGGCAGCTTCTTGGGGGTTTGCTCGGTTTGTGAATGTTAG AGATGCTAGGGGTGCTACCCCATTGCACTTGGCGGCTCGTCAAAGACGGCCTGAATGTGTGCATATTCTATTGTGCAATG GAGCTCTTGTTGGTGCCTCAACTGGCAGATATGGCTGTCCTGGGAGCACTCCTCTTCATCTAGCAGCCAAAGGAGGGTCT CTGGATTGCATCCGCGAACTATTGGCATGGGGTGCAGATCGTCTTCAACGTGATGCATCCGGGCGGATACCATATGTAGT TGCTCTGAAGCACAGACATAGTGCATGTGCAGCATTGTTAAATCTTACAGCTGCACAGCCTCTTGTCTGGCCATCATCTT TGAAGATCATCAGTGACCTCAATCCAGATGCCAAAGTTTTACTAGAGCGAGCCTTGATGGACGCGAACAGGGAAAGGGAG AAAAAGATATTCAAAGAGAGTGCTTACTCTCTTCCATCTCCATCGCACTCTGATCAGATAGATGACAATATCTCTGAGGT TAGTGAGACTGAACTATGCTGCATTTGCTTTGAGCAAGTGTGTACAATTGAAGTCCAAGAATGTGGCCACCAAATGTGTG CAAAATGCACACTAGCCCTCTGTTGCCACAACAAGCCTAACCCTTCTACTTCTTGTCCTATCCCACCGATTTGTCCGTTC TGCCGAAGCACCATAGCTAGACTGGTGGTTATCAAGATAGAAAGTCATGATGACATTGATCAAGATGGTTGTGTTGATAT CTCTTGTTCCAATCCAAGCAAGTCATGGAAGTTCCGGAACTTGAACGAGGGTGGTAGCAGCAGTTTCAAGGGACTATCAT CCAGTGTAAATTCATTTGGAAAGATGGGTTGCCGCAGTTCAGGAAGGGTTGAAGTTGAAGATGAGTGGGTTGATAATAAG CCACAATGA
Protein sequence (LotjaGi2g1v0372500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLSSHFSGCKLQVLSRLLDGSANPDVLNRQKQTPLMLAAMHGKIACVEKLLEAGANVLMFDAGYGRTCLHYSAYYGHSS CLKAILSAAQSSPVAASWGFARFVNVRDARGATPLHLAARQRRPECVHILLCNGALVGASTGRYGCPGSTPLHLAAKGGS LDCIRELLAWGADRLQRDASGRIPYVVALKHRHSACAALLNLTAAQPLVWPSSLKIISDLNPDAKVLLERALMDANRERE KKIFKESAYSLPSPSHSDQIDDNISEVSETELCCICFEQVCTIEVQECGHQMCAKCTLALCCHNKPNPSTSCPIPPICPF CRSTIARLVVIKIESHDDIDQDGCVDISCSNPSKSWKFRNLNEGGSSSFKGLSSSVNSFGKMGCRSSGRVEVEDEWVDNK PQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 206 | 202 | 1.3E-44 | ||
| Pfam | 7 | 52 | 46 | 4.4E-5 | – | |
| SUPERFAMILY | 9 | 200 | 192 | 6.43E-40 | ||
| PANTHER | 10 | 402 | 393 | 4.4E-244 | – | |
| PANTHER | 10 | 402 | 393 | 4.4E-244 | – | |
| ProSiteProfiles | 12 | 200 | 189 | 35.782 | ||
| SMART | 31 | 60 | 30 | 1.0E-4 | ||
| ProSiteProfiles | 31 | 63 | 33 | 11.22 | ||
| Pfam | 62 | 136 | 75 | 4.9E-10 | ||
| SMART | 65 | 95 | 31 | 0.013 | ||
| ProSiteProfiles | 110 | 142 | 33 | 10.927 | ||
| SMART | 110 | 139 | 30 | 0.0098 | ||
| ProSiteProfiles | 147 | 179 | 33 | 12.422 | ||
| SMART | 147 | 176 | 30 | 0.13 | ||
| Pfam | 148 | 185 | 38 | 1.8E-7 | – | |
| Gene3D | 255 | 341 | 87 | 3.2E-6 | ||
| SUPERFAMILY | 266 | 326 | 61 | 3.53E-5 | – | |
| ProSiteProfiles | 273 | 322 | 50 | 9.052 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0372500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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