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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0372500 |
| Transcript ID | LotjaGi2g1v0372500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp|Q94B55|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr|I1LK31|I1LK31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0372500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86941085..86944880) extracted from Lotus japonicus Gifu genome v1.2.
CAGCAAAATGTGTGACCACAACACCAACCAGTTCCTTCCAGTCTTTCTTTCTTTCTTTCTACGCTGACTCGAAACCCGAA CCCATAGCTCACCCTTTTGATTAAACAAACCATTTTATTTTTACCATTCAAAGTTCAAAGTTCAAAGTTCAAACAACAAC ACTCCCCATTAACCAGTTTGAACCTGAAGCGTTGGATCAATGGAACAAAAAGTGGATGCTATTAATTTCAGAGTTTTCGG GATGCTACAGACTGACTACCCTTTGTGTTTGTGGGAATCAATCTGATTGATGCCACAATATCCATCTTACTCTCTCATCA CTGACACATTCATCAGCTACCCACACCCCTGTCTCTGTTTTCTGTTCTTCTTCCTCTCTCTGTTTCCCTCTCTCTCTCTA CGGTCCCGGGCTTCAAATGTGGAAAGTTTGAATTCAAAACGTGCAGGCCACCACCGTCTCTCTCTGGCAAAGGTGGCGCA GTCAGGGAAGTGAGAAGAAGAGATAGAGTGATGGGTCAGGGGCTGAGTTGCAGAGGGAGCCATGAACATGGACTCTTCCG TGCTGTTCAGCATGGGGACCTTCAAACTGTTTCCACTCTTTTACAGACACATCCAGCTCTCATGCATCGAACCACTGTCT ATGACCACCACTCTGCTCTTCATATTGCCGCTGCCAATGGCCAGATCCAGGTGGCTTTTCATTTTCATTTTCATTTTCAT TTTCATTTTCACTTGTGGGGTCTGAAAATTCATGTCTCTATCCTCACATTTTTCTGGCTGCAAATTGCAGGTTCTATCTA GGCTTTTAGATGGATCTGCGAATCCTGATGTGTTGAATCGCCAAAAGCAGGTCGCTTTTTGCTTTTATTCCTGATTTTGA ATGTGGCATTTGTTGTCTTTTTTATTTTGCCTCACTGATTTAATTTCATTGCATTTGAATGATTCAGACCCCGCTTATGT TGGCTGCAATGCACGGAAAAATTGCTTGTGTGGAGAAGCTTCTTGAAGCTGGGGCTAATGTATGTGACATTTCCTGAGAT GTTAATTCATTCCAATTTTCTGAAATATTTGTTATTTGATGATAATGGATTTTATTAAATAAAACTTCAGGTATTAATGT TTGATGCTGGTTATGGAAGAACCTGTTTGCACTATTCAGCCTACTATGGTCATTCTTCATGCCTTAAGGCAATTCTTTCT GCAGCTCAATCTAGTCCAGTGGCAGCTTCTTGGTTGGTCCTTTTTCTGTTTTAGCATTTCAATTCATGTGGGTGTTTTCT TATTTTCTTTATGATGCTTATTGATACAGAAAAGAATTCAATTAATTGCAGGGGGTTTGCTCGGTTTGTGAATGTTAGAG ATGCTAGGGGTGCTACCCCATTGCACTTGGCGGCTCGTCAAAGACGGCCTGAATGTGTGCATATTCTATTGTGCAATGGA GCTCTTGTTGGTGCCTCAACTGGCAGATATGGGTAATAATTTGTCTAGGTTCTGGTGTTGGATTTGATGCATTCATTCAT TTGTTCTATGGATTATTAGTATTGATACATTGCAATTTGCAGCTGTCCTGGGAGCACTCCTCTTCATCTAGCAGCCAAAG GAGGGTCTCTGGATTGCATCCGCGAACTATTGGCATGGGGTGCAGATCGTCTTCAACGTGATGCATCCGGGTACAATATA GTTTCTACTTTCTAGATACAATTTATTAACCATGCGGAGAAGATTTCATTGAGTGTATAACTTCATGATGATTGATGCAT ATCTAAACATGTATTTCATTTTCTTTGAAATATATGTAGCTTAATCATAATGAGTTTGCTTACTAGGACATTGATTGTAG TAATGAAATGTATGCTTATTTGACAAATATTATCAATTGTGTTGATTATCCGTCCTGGATTCCCTCCCATTTGGTGCTTT GCCTGTGCAACTTTTCTAAAAGAGAAATGAGAGACTAAGAGAGATGTGAGTGATTATTTGATGAAGAAGAAAGAGAGAGA TAGATAGAAGAAGATAGGAGGCAAAAGTGAGTGTATGAATATAATTTCGCAGAAAGGAAAATTAGAAGTGTTAGACTCCT GAGAGAGTAAGTGAACTTATTTAGGAAGCACCTTCCCCTCATCTAACAGTGTATTCATTCATGTATGTAGAACAAAATCT TATATTTGACTAGCAATGTTTTATTCAGCTGTAGGTTTTGGAATTTCTGAAATTTCCTTCATACTTACATTGTGTTTATG CAGGCGGATACCATATGTAGTTGCTCTGAAGCACAGACATAGTGCATGTGCAGCATTGTTAAATCTTACAGCTGCACAGC CTCTTGTCTGGCCATCATCTTTGAAGATCATCAGTGACCTCAATCCAGATGCCAAAGTTTTACTAGAGCGAGCCTTGATG GACGCGAACAGGGAAAGGGAGAAAAAGATATTCAAAGAGAGTGCTTACTCTCTTCCATCTCCATCGCACTCTGATCAGAT AGATGACAATATCTCTGAGGTAATTTCACACCCTTTAAATTCATACCAACTTCTTTTAGTTTACTACTTTTCTTAGATGT TATTGAATTTAGTCATGGAGATATATAGTTCCTGAGGACTCATAAAATTTACCAGGTGTATACTTATAGTGGGTTCTAAT GTAATTCAGGTTAGTGAGACTGAACTATGCTGCATTTGCTTTGAGCAAGTGTGTACAATTGAAGTCCAAGAATGTGGCCA CCAAATGTGTGCAAAATGCACACTAGCCCTCTGTTGCCACAACAAGCCTAACCCTTCTACTTCTTGTCCTATCCCACCGA TTTGTCCGTTCTGCCGAAGCACCATAGCTAGACTGGTGGTTATCAAGATAGAAAGTCATGATGACATTGATCAAGATGGT TGTGTTGATATCTCTTGTTCCAATCCAAGCAAGTCATGGAAGTTCCGGAACTTGAACGAGGGTGGTAGCAGCAGTTTCAA GGGACTATCATCCAGTGTAAATTCATTTGGAAAGATGGGTTGCCGCAGTTCAGGAAGGGTTGAAGTTGAAGATGAGTGGG TTGATAATAAGCCACAATGATGACGACGATGATGATGCCTGGTGTGATTCTTATGCTTATTATCAATTATATTTGCATAT TGGTAATATGTGGTAATGAGTTGCTTGATAGAATGTTAGGCAAGGCAAAATGAAAGCATAAAGAGAAGGAGTTTGATGTA AGATTGAGAACCAAGCAAAGTAAGTTAAGTTAAAAAGTGTTGGTGGGGGGAGGAGTTACATCATGACATCTGAGCTGTGT TACTTGAAAATGAAGAAGCATCGCCTGTTGTCAATGATAGTATAATAACATGTTTGGATCCGCTTCTCTTTCATTATAAT CCATTCTGAAAACCAGATCCTTCTCATTAGAATTGATTCTGGCTTCAGAATCAATTGTAGAAGGGTTTCCAAACATGTAC TAAGTAATCCTGTGAAGTGAGAAAATATTTTTCTCATTGATTAGAGTCTAAGTATAAGAACATGTGAAAATGTATTTGTG TATTTGCTTCTGATTTGTTGAACTGTGACAAAATGAGCAATAAAATATGAAAGGGAAAGACATGGCTTGTTGTTGGTTGT CATGTGATTCATGTGATAATGTCGGGGTCAGTTGAATAATTTGTGCAGTGCCCATACAGAAGGAACCTTACAATTAATAT AAACATAATCCAGACAAAGTTCATGTGCTATGCTCACCTGCATCTGACTTTATTGCTAGGATCCAGATAACTAGTTGACA AGCAGAATTTGCACTATCTATACAATTACTGTGAAT
CDS sequence (LotjaGi2g1v0372500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCAGGGGCTGAGTTGCAGAGGGAGCCATGAACATGGACTCTTCCGTGCTGTTCAGCATGGGGACCTTCAAACTGT TTCCACTCTTTTACAGACACATCCAGCTCTCATGCATCGAACCACTGTCTATGACCACCACTCTGCTCTTCATATTGCCG CTGCCAATGGCCAGATCCAGGTTCTATCTAGGCTTTTAGATGGATCTGCGAATCCTGATGTGTTGAATCGCCAAAAGCAG ACCCCGCTTATGTTGGCTGCAATGCACGGAAAAATTGCTTGTGTGGAGAAGCTTCTTGAAGCTGGGGCTAATGTATTAAT GTTTGATGCTGGTTATGGAAGAACCTGTTTGCACTATTCAGCCTACTATGGTCATTCTTCATGCCTTAAGGCAATTCTTT CTGCAGCTCAATCTAGTCCAGTGGCAGCTTCTTGGGGGTTTGCTCGGTTTGTGAATGTTAGAGATGCTAGGGGTGCTACC CCATTGCACTTGGCGGCTCGTCAAAGACGGCCTGAATGTGTGCATATTCTATTGTGCAATGGAGCTCTTGTTGGTGCCTC AACTGGCAGATATGGCTGTCCTGGGAGCACTCCTCTTCATCTAGCAGCCAAAGGAGGGTCTCTGGATTGCATCCGCGAAC TATTGGCATGGGGTGCAGATCGTCTTCAACGTGATGCATCCGGGCGGATACCATATGTAGTTGCTCTGAAGCACAGACAT AGTGCATGTGCAGCATTGTTAAATCTTACAGCTGCACAGCCTCTTGTCTGGCCATCATCTTTGAAGATCATCAGTGACCT CAATCCAGATGCCAAAGTTTTACTAGAGCGAGCCTTGATGGACGCGAACAGGGAAAGGGAGAAAAAGATATTCAAAGAGA GTGCTTACTCTCTTCCATCTCCATCGCACTCTGATCAGATAGATGACAATATCTCTGAGGTTAGTGAGACTGAACTATGC TGCATTTGCTTTGAGCAAGTGTGTACAATTGAAGTCCAAGAATGTGGCCACCAAATGTGTGCAAAATGCACACTAGCCCT CTGTTGCCACAACAAGCCTAACCCTTCTACTTCTTGTCCTATCCCACCGATTTGTCCGTTCTGCCGAAGCACCATAGCTA GACTGGTGGTTATCAAGATAGAAAGTCATGATGACATTGATCAAGATGGTTGTGTTGATATCTCTTGTTCCAATCCAAGC AAGTCATGGAAGTTCCGGAACTTGAACGAGGGTGGTAGCAGCAGTTTCAAGGGACTATCATCCAGTGTAAATTCATTTGG AAAGATGGGTTGCCGCAGTTCAGGAAGGGTTGAAGTTGAAGATGAGTGGGTTGATAATAAGCCACAATGA
Protein sequence (LotjaGi2g1v0372500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGQGLSCRGSHEHGLFRAVQHGDLQTVSTLLQTHPALMHRTTVYDHHSALHIAAANGQIQVLSRLLDGSANPDVLNRQKQ TPLMLAAMHGKIACVEKLLEAGANVLMFDAGYGRTCLHYSAYYGHSSCLKAILSAAQSSPVAASWGFARFVNVRDARGAT PLHLAARQRRPECVHILLCNGALVGASTGRYGCPGSTPLHLAAKGGSLDCIRELLAWGADRLQRDASGRIPYVVALKHRH SACAALLNLTAAQPLVWPSSLKIISDLNPDAKVLLERALMDANREREKKIFKESAYSLPSPSHSDQIDDNISEVSETELC CICFEQVCTIEVQECGHQMCAKCTLALCCHNKPNPSTSCPIPPICPFCRSTIARLVVIKIESHDDIDQDGCVDISCSNPS KSWKFRNLNEGGSSSFKGLSSSVNSFGKMGCRSSGRVEVEDEWVDNKPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 449 | 449 | 2.2E-284 | – | |
| PANTHER | 1 | 449 | 449 | 2.2E-284 | – | |
| Gene3D | 6 | 146 | 141 | 3.3E-28 | ||
| ProSiteProfiles | 10 | 247 | 238 | 44.033 | ||
| SMART | 10 | 40 | 31 | 2100.0 | ||
| Pfam | 15 | 109 | 95 | 7.9E-13 | ||
| SUPERFAMILY | 15 | 247 | 233 | 2.89E-48 | ||
| SMART | 45 | 74 | 30 | 0.0025 | ||
| ProSiteProfiles | 45 | 77 | 33 | 11.007 | ||
| SMART | 78 | 107 | 30 | 1.0E-4 | ||
| ProSiteProfiles | 78 | 110 | 33 | 11.22 | ||
| SMART | 112 | 142 | 31 | 0.013 | ||
| Gene3D | 147 | 289 | 143 | 1.3E-22 | ||
| ProSiteProfiles | 157 | 189 | 33 | 10.927 | ||
| SMART | 157 | 186 | 30 | 0.0098 | ||
| Pfam | 158 | 182 | 25 | 7.2E-4 | ||
| ProSiteProfiles | 194 | 226 | 33 | 12.422 | ||
| SMART | 194 | 223 | 30 | 0.13 | ||
| Pfam | 195 | 232 | 38 | 2.2E-7 | – | |
| Gene3D | 302 | 388 | 87 | 3.8E-6 | ||
| SUPERFAMILY | 313 | 373 | 61 | 4.35E-5 | – | |
| ProSiteProfiles | 320 | 369 | 50 | 9.052 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0372500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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