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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0397300 |
| Transcript ID | LotjaGi2g1v0397300.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanine nucleotide-binding protein subunit alpha-like protein; TAIR: AT2G23460.1 extra-large G-protein 1; Swiss-Prot: sp|O80462|XLG1_ARATH Extra-large guanine nucleotide-binding protein 1; TrEMBL-Plants: tr|I1LHJ0|I1LHJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0397300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89471085..89476215) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCAACCATGTCTCCGACGCCGGAATATTCATTCGCCGTCGAGTACGACGGTCCACCGTTAGGCTACAATCTCCCCCG TGCAGTCCCCATAAGCGTCGACAACATTCCGGTAGCTTCCGTGGTTTCTCAGGTTTCTTCCTCCGACACTCTCTCTTTAC CGGTTGTGCAGCCACTCCTACCACCACAACAACAACATCACAATCACAATCTCCATCGTCATCACCATCCTGTGAATGTG AAGGAGGTTAGAACACTCGACTCCGAACCTAGGGTTTCCAAGGAGCTCCAATTAGCTTCTGAGATTACGGTTTCGCCGAC TTCCGTTATCGCCTTCGAGCACCGGACTTCGCAGAGCAATGTTTGTGAGCTTTCCGGTGAATTGAGCAGCTCCGGCGCGT TTGAGTTTTCGAACGGGAATGACGGTGAGTTTTCCGATTTGGGAGGTAGTTCTAGGGTTCCGGAGGAGTCGGTGGGAGGT GGAACTGGAAGCTCTAGAACTGCGGAGTTTAGTGATTCTAGGGTTTTGAAAGAGGATGGAAACGAGAGTTTGGATTTCAA TGAGTCGAATCGGCAAGATTGGGCGTCTAATGAGTCTGTGCTGAGTTTGGAGTATCCGTCGACTCGGGTTTCTTCTTTGA AGGGTGAGGAATTTGATGCTCGACGCACCGTTGCTGTTACTTTCAATGTGGATGATTCTGATGATGCTTCTGAGGAGGAG TTTGATGTGGAGGAAAATGTAACTAGACCGGTTAGAAGGGAGCCTCTGACCAAGGGAAAGAAAGGGTCATGCTATAGATG CTTCAAGGGGAACAGGTTCACTGATAAGGAGGTTTGTCTGGTTTGTGATGCCAAGTATTGCAGTAATTGTGTGCTTAGAG CTATGGGGTCGATGCCGGAGGGTCGCAAATGTGTTACTTGCATAGGGTTTCCAATAGACGAGTCAAAGCGAGGGAATTTG GGGAAAAGCTCCCGGATGCTCAAGCGTTTGCTTAATGACTTGGAGGTTCGGCAGATAATGAAGGCGGAGAGGTTTTGTGA AGCAAATCAGCTTCCACCTGAATACATTTGTGTGAATGGGAATCCGCTTTCTTATGAGGAACTGGTTACCTTGCAGAACT GTCCAAACCCTCCAAAGAAGCTTAAGCCAGGAAACTATTGGTATGATAAGGTGTCTGGTTTCTGGGGGAAGGTATTTATT TATCTATCTGTTTGTTTTTACACTATGCATTTGTGATTTCTGTGCTGCTTGATTTCTAAGTTCTAAGTATCTATATGGAT TCTGGTTGGTTTGTGATTTCACAGGAAGGAGAGAAGCCTTCCAGTATTATTAGTCCCCATTTGAATGTTGGAGGGCCCAT TCTACCGGATGCTAGTGATGGAAACACTCAGGTTTTCATTAATGGCCGGGAGATAACAAAAGTAGAGCTTCGGATGTTGC AGGTTGAGAATTCGATATATGTTCAAACAATTTTGAAAGGCTCCTTGTTAATAACCATATCTTGTTCATTGTAAAACAAA ATTGTTAACAGATTGTGTTTTGGTTGCACAGTTGGCAGGAGTTCAATGTGCTGGCAACCCACATTTTTGGGTTCATGAGG ATGGTTCCTACCAAGAAGAGGGACAGAAGAATACAAGAGGGTATTTATGGGGCAAGGTAACCTATTTATTTCTTTTGGGG CATAATTATATCTTATTTCTTCTGGAATGCATAATGTTAGGCTGGAACGTAGCTTGTATCTCTTACACACTCTTTTTATT TCACTTGTTAGGCTGGAACGAAGCTTGTATGTGCTTTCTTGTCCCTCCCAGTTCCTTCTAAATCTTCAAATGCTGTTGGA GAACAATACTCCAACCTGGCTAGCAGAACAATTCCTAACTACCTCGAGCATGGAATAGTTCAGAAGCTTCTCTTGGTTGG TTGCAGTGGATCTGGAACGAGCACTATTTTTAAGCAGGTGATTTTTCTTTGGAATTGAGTCTGGGAATCAAGTCAAACTT AATACCCTACTTTCTTTTAGTTATTGGACAAAATATGGTATCTAAGCATGTGTTACGGGATTTGCTGTTTTTTAATTCAC TTAGAAAACCGAAAGAAACTTCTGAGAGTTTTCGAACTCTATCGTCAGTCATAATATATTGTTAACAATGTCAATCCTGC AAAGTTTGCTTCTTATGTTAATTTGATACGCAAGTAAGACACTCTCTTTTGTCTCATTAGGTATTTACTAATATAGAAAG GCTGATTTCGATGGTAAATGACAGCTGAATTCGTAGTTGGACATAGAACCTGATAATACATGCCTACTTGATCAATCTTG AAATAAAATGTTGACAGCTTGCATCCTCAAAACAGAAACCAAACCCGTTGCATAGTTGCTGGTAATCAATTTATTTATGG AATTGCAAATATTTATGGCAGGCCAAAATTCTTTACAAAAGCATCCCCTTCTCAGAGGAGGAGCGTGAAAATATTAAGTT AACCATCCAGAGCAATGTTTATGCCTACCTTGGCATACTCCTTGAGGGACGTGAGCATTTTGAAGATGAAAGCTTGGCAG ATTTGAAGAAAAGGAAATCCTCTGAGCTTGATACCACTGGTAGGGTGCATTTTCTCCCTCTTTCGCACTTCTTCCTCTGA TTTTTTTATTTAATTAAAGTTTGACTCTTTAGTTCCTTTTAAAGCATCATTCATGTCATGTCAGTCCAAATGGTTTGCAG CATGCTAACATGTTTGTTTAAGGTATCAATTGCTGTATCATAGTTCTTTTTTGACCTCCTTACCTTAGTAAGTAGTGCCA TACAACCTACCAGTTCAGAGTGCTTTGATAATAAAATAGCTGCATCTTATCTTATGCCTGCCAAGTGTCAACTGTGGACC GAGTGTTAAGAGTAAACTTGTTAAGGAGAACTTCTCATTGAAATCTTCTTACAAAATAATGCTGATCTGTGAATGTCTTC TCCTAAATTTCTAATGATTCGGAATACTACTATTTTTCTTTATCATTGTGGACCATGTGATGGCCATAGTAGTTTTGTTC CATTTTAGAAGTGTTGGTGTGTTGAAAATATTAGATGCCATTCAAATTAGTCTGTCTAACTTGTACATTAATTTGGATTG CATATTCTGTTATGTTTATGTTTGAATCATTATAGTTGGTTTTGAAGTTGGATCTCCAAGAAGCTAACAACTACTAATAC TAACAACCAAGACTATACTCTAATACTCCAAGAAAAATTCTTAAACAAATACACTGATCTAAAATTTTCTGTTACAATTA TGGTTTTCTACAGGAACCAGTGCAAAACTTGATGACAAGACAGTATATTCCATTGGTGCAAGGCTCAAAGCATTCTCTGA TTGGTTGCTGAAAACTATGGTATCAGGCAAACTTGATGCTATCTTTCCAGCTGCTACTCGTGAATATGCACCACTGATTG AGGAGTTGTGGAACGATGCAGCCATTAAGGCCACATATGGAAGAAGAGGTGAATTAGAAATGCTGCCTAGTATTGGTAGT TATTTCTTGGAGCGGGTAAGATCATTCTTTGATTTTTATTATTTTATATGTGCGCACTTGTCAATTTGATTGTAATTGTT GTTGGGTGTCTTTGACAATCTTGGGCTGTTAATGGACAACATTTCTAACGTGACCATTTTCTGTTTAGGCTGTTAAGATA TTAAGGACTGATTATGAACCCTCAGATTTAGATATTCTCTATGCTGAGGGAGTTACTTCGTCCAATGGGCTGGCTAGTAT GGAGTTTTCATTTCCCCAATCAGCTCATGAGGAAACTGTTGACACTGCTGATCAACAAGGTTCATTGTTTAGGTGGGTGA TATAACATTGTGCTTTTTGTTATATCTCAGTAATGGGTTGTGGCCCTGATTAACCCTGTTGCTGTTATAATATTGTAGAA TTGTGGTGCGCATATGAAGCTGATGAAAAATGTTTGTCAATCAGATGCTATTAAAATTCTTTTGTTAAAGCCCTGGTTGT CTGTGTACTCACTTGTATGATGTTTAAGAAACACAATGGAACTTTCTCCCATCTGCATGCACAATCTCCCATCTGCATGC ACAAGCGCGTGCACACACACACACACACACACACTCACATAAACATATATATGTGAAGTACGCCATATGTAATATTTCTG ATTTGGCATTTTTTATGGATTTTTATATTCTTTAGACAGAAGTGCTAATACCATACTGGAATGGCTATTCGAGTTTTTCT ATAATCAGGTTTAGTGTGTAAATTAGAAAGATGCATTCAAATTTGCATATTTGTTTCAAATGCTCGGAATACTAGAATTC ACAAGATTCAAAAGCATATCTAAATTATGTCGGAGTTATCTGAAAATGTTGCGGATTCATTTATGTAAATTTGAATAGTA AGGAAATTTATGTGTGACTTACTCTACATATGTCTGTGTAACTTTTTGGTTTTAATAATTGTTTGTAGGGGGAGGGAAGT CATAGATACAACTGCTGTTCAATGTTTCTGATTATTTATACTTTTTAATTGGTTAACAGGTATCAACTGATAAGAGTGCA TGCTAGGGGGCTCGGAGAAAATTGCAAATGGCTAGAGATGTTTGAGGATGTTGAAATGGTCATCTTCTGTGTTTCCTTGA GCGACTATGATCAGTTTTCTGTTGATGGAAATGGTTGTCTCACTAACAAGATGATATTGAGCAGGAAGTTTTTTGAAACC ATTGTCACTCATCCAACTTTTGAGCAAATGGATTTCCTGTTGATATTAAACAAATTTGATCAGTTTGAGGAGAAAATTGA ACAAGTTCCTCTGACTACTTGTGACTGGTTCTCTGATTTTCATCCAATAATTAGCCGCAATCGCACCAACAGCCATAGCA ACAGCATTAATAGTAATCCCTCTCTTGGCCAACTAGCTTCCCATTACATAGCAGTTAAGTTTAAAAGGCTTTATTCATCT CTTACCGGACGAAAGTTGTACGTGTCCCCGGTGAAGGGTTTGGTGCCTGATAGTGTTGATGGAGCACTTAGATACGCCAA GGAAATTTTGAAGTGGAACGAAGAGAGACCAAACTTCAGCTTAAGTGAGAACTCAATGTATAGCACTGAGGCAAGTTCAT TCTCTCCTTGA
CDS sequence (LotjaGi2g1v0397300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCCGACGCCGGAATATTCATTCGCCGTCGAGTACGACGGTCCACCGTTAGGCTACAATCTCCCCCGTGCAGTCCC CATAAGCGTCGACAACATTCCGGTAGCTTCCGTGGTTTCTCAGGTTTCTTCCTCCGACACTCTCTCTTTACCGGTTGTGC AGCCACTCCTACCACCACAACAACAACATCAAACACTCGACTCCGAACCTAGGGTTTCCAAGGAGCTCCAATTAGCTTCT GAGATTACGGTTTCGCCGACTTCCGTTATCGCCTTCGAGCACCGGACTTCGCAGAGCAATGTTTGTGAGCTTTCCGGTGA ATTGAGCAGCTCCGGCGCGTTTGAGTTTTCGAACGGGAATGACGGTGAGTTTTCCGATTTGGGAGGTAGTTCTAGGGTTC CGGAGGAGTCGGTGGGAGGTGGAACTGGAAGCTCTAGAACTGCGGAGTTTAGTGATTCTAGGGTTTTGAAAGAGGATGGA AACGAGAGTTTGGATTTCAATGAGTCGAATCGGCAAGATTGGGCGTCTAATGAGTCTGTGCTGAGTTTGGAGTATCCGTC GACTCGGGTTTCTTCTTTGAAGGGTGAGGAATTTGATGCTCGACGCACCGTTGCTGTTACTTTCAATGTGGATGATTCTG ATGATGCTTCTGAGGAGGAGTTTGATGTGGAGGAAAATGTAACTAGACCGGTTAGAAGGGAGCCTCTGACCAAGGGAAAG AAAGGGTCATGCTATAGATGCTTCAAGGGGAACAGGTTCACTGATAAGGAGGTTTGTCTGGTTTGTGATGCCAAGTATTG CAGTAATTGTGTGCTTAGAGCTATGGGGTCGATGCCGGAGGGTCGCAAATGTGTTACTTGCATAGGGTTTCCAATAGACG AGTCAAAGCGAGGGAATTTGGGGAAAAGCTCCCGGATGCTCAAGCGTTTGCTTAATGACTTGGAGGTTCGGCAGATAATG AAGGCGGAGAGGTTTTGTGAAGCAAATCAGCTTCCACCTGAATACATTTGTGTGAATGGGAATCCGCTTTCTTATGAGGA ACTGGTTACCTTGCAGAACTGTCCAAACCCTCCAAAGAAGCTTAAGCCAGGAAACTATTGGTATGATAAGGTGTCTGGTT TCTGGGGGAAGGAAGGAGAGAAGCCTTCCAGTATTATTAGTCCCCATTTGAATGTTGGAGGGCCCATTCTACCGGATGCT AGTGATGGAAACACTCAGGTTTTCATTAATGGCCGGGAGATAACAAAAGTAGAGCTTCGGATGTTGCAGTTGGCAGGAGT TCAATGTGCTGGCAACCCACATTTTTGGGTTCATGAGGATGGTTCCTACCAAGAAGAGGGACAGAAGAATACAAGAGGGT ATTTATGGGGCAAGGCTGGAACGAAGCTTGTATGTGCTTTCTTGTCCCTCCCAGTTCCTTCTAAATCTTCAAATGCTGTT GGAGAACAATACTCCAACCTGGCTAGCAGAACAATTCCTAACTACCTCGAGCATGGAATAGTTCAGAAGCTTCTCTTGGT TGGTTGCAGTGGATCTGGAACGAGCACTATTTTTAAGCAGGCCAAAATTCTTTACAAAAGCATCCCCTTCTCAGAGGAGG AGCGTGAAAATATTAAGTTAACCATCCAGAGCAATGTTTATGCCTACCTTGGCATACTCCTTGAGGGACGTGAGCATTTT GAAGATGAAAGCTTGGCAGATTTGAAGAAAAGGAAATCCTCTGAGCTTGATACCACTGGAACCAGTGCAAAACTTGATGA CAAGACAGTATATTCCATTGGTGCAAGGCTCAAAGCATTCTCTGATTGGTTGCTGAAAACTATGGTATCAGGCAAACTTG ATGCTATCTTTCCAGCTGCTACTCGTGAATATGCACCACTGATTGAGGAGTTGTGGAACGATGCAGCCATTAAGGCCACA TATGGAAGAAGAGGTGAATTAGAAATGCTGCCTAGTATTGGTAGTTATTTCTTGGAGCGGGCTGTTAAGATATTAAGGAC TGATTATGAACCCTCAGATTTAGATATTCTCTATGCTGAGGGAGTTACTTCGTCCAATGGGCTGGCTAGTATGGAGTTTT CATTTCCCCAATCAGCTCATGAGGAAACTGTTGACACTGCTGATCAACAAGGTTCATTGTTTAGGTATCAACTGATAAGA GTGCATGCTAGGGGGCTCGGAGAAAATTGCAAATGGCTAGAGATGTTTGAGGATGTTGAAATGGTCATCTTCTGTGTTTC CTTGAGCGACTATGATCAGTTTTCTGTTGATGGAAATGGTTGTCTCACTAACAAGATGATATTGAGCAGGAAGTTTTTTG AAACCATTGTCACTCATCCAACTTTTGAGCAAATGGATTTCCTGTTGATATTAAACAAATTTGATCAGTTTGAGGAGAAA ATTGAACAAGTTCCTCTGACTACTTGTGACTGGTTCTCTGATTTTCATCCAATAATTAGCCGCAATCGCACCAACAGCCA TAGCAACAGCATTAATAGTAATCCCTCTCTTGGCCAACTAGCTTCCCATTACATAGCAGTTAAGTTTAAAAGGCTTTATT CATCTCTTACCGGACGAAAGTTGTACGTGTCCCCGGTGAAGGGTTTGGTGCCTGATAGTGTTGATGGAGCACTTAGATAC GCCAAGGAAATTTTGAAGTGGAACGAAGAGAGACCAAACTTCAGCTTAAGTGAGAACTCAATGTATAGCACTGAGGCAAG TTCATTCTCTCCTTGA
Protein sequence (LotjaGi2g1v0397300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPTPEYSFAVEYDGPPLGYNLPRAVPISVDNIPVASVVSQVSSSDTLSLPVVQPLLPPQQQHQTLDSEPRVSKELQLAS EITVSPTSVIAFEHRTSQSNVCELSGELSSSGAFEFSNGNDGEFSDLGGSSRVPEESVGGGTGSSRTAEFSDSRVLKEDG NESLDFNESNRQDWASNESVLSLEYPSTRVSSLKGEEFDARRTVAVTFNVDDSDDASEEEFDVEENVTRPVRREPLTKGK KGSCYRCFKGNRFTDKEVCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFPIDESKRGNLGKSSRMLKRLLNDLEVRQIM KAERFCEANQLPPEYICVNGNPLSYEELVTLQNCPNPPKKLKPGNYWYDKVSGFWGKEGEKPSSIISPHLNVGGPILPDA SDGNTQVFINGREITKVELRMLQLAGVQCAGNPHFWVHEDGSYQEEGQKNTRGYLWGKAGTKLVCAFLSLPVPSKSSNAV GEQYSNLASRTIPNYLEHGIVQKLLLVGCSGSGTSTIFKQAKILYKSIPFSEEERENIKLTIQSNVYAYLGILLEGREHF EDESLADLKKRKSSELDTTGTSAKLDDKTVYSIGARLKAFSDWLLKTMVSGKLDAIFPAATREYAPLIEELWNDAAIKAT YGRRGELEMLPSIGSYFLERAVKILRTDYEPSDLDILYAEGVTSSNGLASMEFSFPQSAHEETVDTADQQGSLFRYQLIR VHARGLGENCKWLEMFEDVEMVIFCVSLSDYDQFSVDGNGCLTNKMILSRKFFETIVTHPTFEQMDFLLILNKFDQFEEK IEQVPLTTCDWFSDFHPIISRNRTNSHSNSINSNPSLGQLASHYIAVKFKRLYSSLTGRKLYVSPVKGLVPDSVDGALRY AKEILKWNEERPNFSLSENSMYSTEASSFSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 113 | 171 | 59 | - | – | |
| MobiDBLite | 151 | 166 | 16 | - | – | |
| PANTHER | 193 | 909 | 717 | 0.0 | – | |
| PANTHER | 193 | 909 | 717 | 0.0 | ||
| SUPERFAMILY | 237 | 288 | 52 | 3.09E-5 | ||
| SMART | 486 | 863 | 378 | 4.9E-16 | ||
| ProSiteProfiles | 500 | 902 | 403 | 56.539 | – | |
| Pfam | 502 | 873 | 372 | 2.6E-60 | ||
| SUPERFAMILY | 502 | 888 | 387 | 9.89E-20 | ||
| CDD | 502 | 863 | 362 | 2.44803E-75 | ||
| PRINTS | 503 | 518 | 16 | 5.3E-8 | ||
| Gene3D | 503 | 857 | 355 | 1.1E-67 | – | |
| SUPERFAMILY | 530 | 679 | 150 | 6.41E-19 | ||
| Gene3D | 531 | 682 | 152 | 1.1E-67 | ||
| PRINTS | 669 | 691 | 23 | 5.3E-8 | ||
| PRINTS | 739 | 767 | 29 | 5.3E-8 | ||
| PRINTS | 787 | 796 | 10 | 5.3E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Biological process | G protein-coupled receptor signaling pathway | A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576). | ||
| Molecular function | Guanyl nucleotide binding | Interacting selectively and non-covalently with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate. | ||
| Molecular function | G-protein beta/gamma-subunit complex binding | Interacting selectively and non-covalently with a complex of G-protein beta/gamma subunits. |
Expression pattern of LotjaGi2g1v0397300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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