Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0406300 |
| Transcript ID | LotjaGi2g1v0406300.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tetratricopeptide repeat protein 13; TAIR: AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1; TrEMBL-Plants: tr|G7K3X6|G7K3X6_MEDTR Suppressor of RPS4-RLD 1/TPR domain protein; Found in the gene: LotjaGi2g1v0406300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90334229..90343781) extracted from Lotus japonicus Gifu genome v1.2.
TCATCCATGGCTCCTGCTACCTCCCAGCGAGCTGAGCTGGCCAGGCTCTGCAGCTCCAAGGACTGGTCCAAAGCCATTCG CATCCTCGATTCGCTCGTTTCTCAGTCTGGTGCAATTCAAGACATCTGGTTTGCACATAAACTTCTTTATCACCTCCAAT TCTTGCTGATTCCTTTCCTTAATCTTGATTAATTCTCTCTTGTGAATGCTAATTTGATGTTCAATCTTTATTCTGATGCT TGGTTTCAGCAACAGAGCCTTCTGTTACAGCCAATTGGAGCTTCACAAGCACGTAATCAAGGATTGCGATAGAGCTCTTC AGCTTGACCCTGTGCTTCTTCATGCTTACATTCTGAAAGGTCTCTTTCCTAATCAAATGCATTCCAGAGCTTTTAATTCT TCTTAATTGCTTGTTTGTATTATAATCAATGCAATAACACGGGAAATCGTGGCTTAAACTCTCTCATAAGGACAATTAAT ATTGTTGATTATAATAACTGTGTTGGAATTTGAAGTTTTATTTCAATGGATTTGTTCGTGCTGTTTAATCGATATCATTG TATGATTTTTTTGTTTTAATTTGACAGTAGGATAGACAAAGGCCTTATCTTTTGTACTGGATACTGGTTTATTCTGTCAT CTAGGTCATGCGCTTTCTGCGTTGGGAAGGAAATCTGATGCTGTACTAGTATGGGAGCAAGGTTATGAACACGCTCAGCA TCAGTGTGCAGATTTGAAGCAGTTGCTAGAACTTGAAGAGCTTTTGGTGAAAGCAAAACAAGGCAACGATAATGGATTGT CCATGCTACAAGCCGAATCAGATTCTCAGAGGAATGGGAACGTGTCTGAAACTTGTGAGAATCAAGATAGGTTGAGTGAC CAAGCTGAGTCATGTGGCAACACAAGTGATAAATCTGATATCTTGCTGAAGTCTGCTGATAAATTTGACTCGAACAATGA ATTAAATAATGAAGATAGAGAGTCTAGTAAATGCGATGGCCAATTGAATGGAACCCCTGATGTTATTGATAAATTGAGCT ATAATTCTGAATCATGCAATGACTCAAGTGACGCCTCTGAATCATGTGATAAAGTATTTACCACTGGTGAATCTAGTGAC TCGACTGATGTCACTGAAATTATTAGAAAGCCAAGTAGTAAGTTTGTTTTTCCCCATGAAAAAAACAACGAAGCAAGGAA AAATAAGAAGTTCTGCGTTTCTCGGATTTCAAAGGCAAAGTCTATAAGTGTAGATTTCCGGCTTTCACGGGGAATAGCAG AGGTTTGTTTACACAACTGTTCTCTTGCTGTATTTATGTGTTTAATAGCATATTTGATGCCTTGATTGTTCTGTAGGTTA ATGATGGAAGATATGCTCATGCCATATCCATTTTTGACCAGGTACAATGTTTTCCTTCTTGGTGATACTTTTATTGTTTT CCTTTTATGTACTTGTTATCTTATCCTCGTTTTCTCTGTTGTCAAATGAGTTACTGTGGCTTTGTCTCCATTACATGCTC AGATACTTAAAGAGGACCCTGCATATCCTGAGGCTCTGATAGGAAGAGGAACAGCATATGCATTCAAAAGAGAACTCCAT GCTGCTATAGCTGATTTTACAAAGGTATTTGTAAACAAACACTGTCTAAAAGTTGCTTTAGAATCTTGTGTTTCCTTTAT TTCGAAGTAATTTACATGTATGCCTTAGGCAATACAATTTAATCCATCAGCTGGTGAGGCATGGAAGAGGAGAGGTCAGG CCCGGGCAGCCTTGGGGGAGTTTGTTGAGGTGAGGGTGGTTACTTTCTTGGTATCTGTCTAACACTTTGAAGTTTTACTA CCTAAATGTCATTTCTGATTGTAACCTTAACTTTGTTGTTTGAATAATTAGCTATTGTAGTTAAACATAGCTTCATCTTA ATTATTACGTCTGGTCCATTGACACACACATACATAAGTGGCCCAGTTCTATTGTAGAAAATAAAAATAGCAAGGAAATT CAGTTTTTATTTATTTGTGATTTTGCTTCTTTTAACTAAGGTGTGAAGTTTAATATAGGTTAGGCATTACTACTTGCCAG TTTCCAGTTAAAGCTTTTAATTATATGGTTACACAATACACAATTAATTATTTTGGTAGGACTCATTTGGCATTTACTGT GATAGATTAATGTTAATGTTATCACGTGTTTAATTGTAAAGACTAAAGAGGAAGTTTGAAATATGAAAACATAGAAATTT TTCGTGCTCTTGTGATTCTTCACGTGAGTCAATACGATTGTATATTATTTTCTTTCACAAATGACAATCCATCCATAAAT GTGACACTCTAAACTGCTTCCTATATCAGGCTATTGAAGACTTGACTAAGGCATTAGAGTATGAATCCAACTCAGAAGAT ATTTTACATGAGAGAGGTATCTTGTCTGACAGTCTTTTCATTTTGCTATTTGGATAGCTAATTGATGCTGGCATAAGCAA TTACCTCATTTCTCTTTATCTCTTTGCTATGATGGGCTGATGCATGGATCTTGTGGTAACTGCTAGATGTCTAGGCAGAG AAACTTAATTAGTTTATAATGATTTTGTTGTAGAGAGTGCTACATATATATGTTTGATCTATGATTTTTATTAAATTCAA TACAGGAATTGTCAATTTCAAGTTTAAAGAGTTTAATGCTGCAGTTGAAGATCTTTCAGCTTGTGTGCAGATAGACACGG ATAATAAGTCTGCCTTCACATATTTGGTGGGTCTTCACATTTTAATTCATGTTGAGCATGAACCCTTGATGTTGGTTTTC TTCTCTTTACATGAAAATGTGCCTTAAATGTTTTCCTGAGTAAGCATTATCTCATGCAGGGTTTAGCATTATCTTCAATT GGTGAATTTAAAAAAGCTGAGGAAGCACATCTAAAATCAATTCAACTTGATAGAAATTTCCTTGAAGCATGGGCACACCT GACTCAGGTATCTATGAACATTGTTGTACTAAAAGTCTAAAAGATCATTGGCACATTTCAGAAATAAATGCAACATTTGG AAGTTGTTAACTTAGCTTTAATTTCGATGCTGAGAATCCTGAATCATCTGTGTGAATATTATTTTCAGATTTGTAATGTG ATAACTTGCTTATTTGTATGATCTCTGGTTTCTAGTCACATCTACACTTTTATCTGTGTCATGTCTCTCTACTTGTATTC TAATCCACTCATTCAATTGAGTTGAAGTTTCCATTTCATGACAGCTTGATAGCTTAATTCACATATTGTTTTAGTTATTT ATAGGCTTCACTATATTTATAAGTTAAATCTTTCATGGCTATTTATGACCAGCAAAAAGCTTTAAAATGTTATTTTAGCT GATTTTGGGTTGCTAGCCTGTTTCTCCATGTCGGCAGTTTATCAAAGATCTATCTTATAGTAGATATGGGACATCTTTTT TTTAGATTTTTGTTTATAGTTATATGCTTAAAGCTACTCCCTCCGTTCCAAAACTATTGTAGTTTAAGGGTTATGCACAA AGTTTAAGAGTTCATTAATTGATGTTATAATTTGACTGAAACACCCTTATTTAATATGAGTTATATGAAAGAGAGAGAGA ATGAAAATCATTGGTCAACTAATTGGTGAGAATTGTAATTGGTGGAAGTAAGAGGTGATACTTGGGAGATATAATATTAA ATGAGGGCATGAATGGAAGAGAATGAGATAAAGTGCTTTGGATATGTAAAACAACAATGGTTTTGGAACAAAATAAAAAA GTTAAAACTACAATAGTTTTGGAACGGAGGGAGTAGTAAATTAGATGATTTTGGTTGCTAGTTTTGTTCTGAAAGTGGGT TTTTGGCAGTTCTATCAAGATTTATCGAAGCCAACAAAAGCTCATGAATGTCTAAATAAGATGCTACAAATTGATGGGAG GTAATTATTGTGAATATAACAGTATTACTCACATTATCATTCTTTTCTTTGGTTTGTCACAGTTGATGTACTTAGTTCCT GTTAGCTCTGTATCTGAGACTGATTGCTTGAGTTTTGATGATAGGTTTGCAAGAGCTTATCATTTGCGTGGCCTTTTATT TCATGCAACGGGCGAGCATAGGTACTTATACAACCATAATTGCTGATTACCAGGAGATTAAATATTTGTTTGGCATGACT GCTTCTTGCTGTGAACTTTCAATAGCCTTGATGGTTGGGTACTTGGGTCCACAATTACAAGTAACAAGTTTGAGATATAC TGACAGACATACTAACATTATAGGAGAAAATTTGGTGTTAGAGCATGGAAACTCAAATATGCTGAAAACATTCAGGGAAT AAAAGAAATTGAAAATGCTTTTCGGAACTTATGAGTGATCATGGAGGGAAAACTTTGGATCTTTTTTTTTCATGAAAGTA AAATGGGATCTTATTCAGAGGATAGTTTTGTATTTCTGGTGGGTTATATAACATGCACTTCAATACTGCTTTTTGTTGTG TGTGCATGTAGTCAATGCAGCCAGTTGTTTGTAGCAATTGTTTTTTGGAATCCTAACTGAAGTGGTGCGTTCAGTGGTTA GTGAGTCACAGTTTTCTCTGCAATGTAAAGATTTTAGAGACAATATCAACCTCTAATATATAAGCCAGTCAGCGGGATAT ATTAATATTAACTTCTCTAAGAGAACAGTTCAACGGGTTTAATTGAATTCCGTTATCTGATCAGATTAGATATTATCTAA GACTGTATAAGAGAGACCTAACTAACTGGATTGCTAGCAGTAGCAGTGATCACATCTCATACAATTATTGAACAATGTGG ATACTGGTGTAATATAATAATGGTTTGTTGATAGCTTTGAATCTATAGGGTTCATATCTAAATAAATTGCTTTCAAAGAT TTCATGCCAAGGATCGAGTTGTGTGTTCTGCTTGATTTTGTTTCAGACTCAAATTGAGTTTAACTGTTACAGGAAGGCTA TCAAAGATTTGACAATGGGGTTGAGCATTGATGGTGCCAACATTGAGTGTTTATATTTACGAGCTTCATGCTACCATGCT GTTGGACAATACAAAGAGGCGGTATGGTTTAGTTTTAGTTTTTGGGAGAATTGTGGGTTCACATTTTTTGGTCTAGAACT TTATTTAATGGTCACAGGTCAAGGATTACGATGCTGCACTGGATTTGGAATTGGACTCAATGGATAAGTTTGTTCTCCAG TGCCTTGCGTTTTATCAGGTTTTTTTTTTCTTTCTGGATCAGCGTTTTATCAGGTTTTTAATATTGTGAAATAGTATATT TTGCCAAATCTTTTTTAATTCCTTTATATTTATAAAATAGAACACAAGTATGTTTCCTTTACCATGAAAAATCTACGGAT AAAGTTGGGTGCATGGAGTAGTAAATTTTCAAAGTCAGCATTATGTTGAAGTGAGAGATTGTAGACTTCCAATATACTAC TAACTGAGAATTTTCTGGTGAACATGCAAAACTCCGTTAGCATTTTTCAATATGATGTTGTTCTCTTCTGCTTTAGTTCT TCATATTGCTTAGTCATCATTGTATGTCTTCATTGACTAATGGTATTGTATGTATTGGTGTGATAACAATCAATATCTTC CTTTTAAGTTCTACACCTTAGTATCTATTTAAATACGCTCAACGAATGACTCCTCCGCATAATGAGAATGTATATAAAAG CTTGGTTCAGTGATGTGATTCAAACTCTTTTCTTCTTTTGCAGAAAGAGATTGCTCTTTACACAGCCTCAAAGTTTAACA GTGAGTTTTGCTGGTTTGATATTGATGGAGATATTGATCCACTTTTTAAGGTAAAATTAATGAAAGTTATTCTTCATTTC TTTGATACTCTCAGCCCCTTAATTAGGCTGAGCTATATTTGCTATGGGATAGAATACTAACATGAACTAAACAATTTGAA ATCATGGTGTGTTTGTGCTTCTGTCTGACTCTGAATATCAGAAATTCATAACTCTTGCTTGTCTATATTATAACTTAAGT TTCTTTCTGGGCTTCAGAAGCTTACAAACTTTTAATTTCAACCTTCTATGTTGGAGCTGTGTTTTGCAATGCCTGGATTC ACAGTTCTATGGTATTTATTTGTCTTTTTATATATAGGAGTACTGGTGTAAGAGACTGCATCCAAAGAATGTATGTGAAA AGGTTTATAGGCAACCTCCTTTGCGGGAGTCTTTAAGAAAGGGGAAGCTTAGAAAGCAAGAATTAGCTCTTACAAAGCAG AAGGTTGCTCTTATACAGGCTGCAGACTCCATTGGCAAGAAAATCCAGTATGATTGTCCTGGTTTCCTACCTAATAGGCG TCAGGTAATGTTTTATATGTTATTGTCCCTATGTCTGCGGCTTATTAGTTTTGTTCATTTTATTTTCCTTCGCTTGTTGT GGAACCCTTTTTCCATGGTTTGTTATCTTTTCTTTGTCCTAATAGACTTAGGAAAGGCTTTGGTTTTTACTAGAAACCCT GTCCTTGATTTGATAGTTGCTACTGAATATTCCGTCTTAGAAATCCAACTACTCTTGGCTATTTTGTAATGTGAATTTTT TAGTTATTACAAATAATATCCTTATCTCCTATCCCTACAATTTAGAAGTGATCTTTTATTCGGATTCAGATTTTAATGAG ATCTACATGTAAATCTTAGGGTCTGAGAGGAATTCTCTCTGGCAGTTTCAAGTATTCTAAAGTTCAAGTGAAATCAAATT ACAGAAGAAAAATATAAAGAAAGTGCATTTTGTACTATTTTTCATTTTCTCCAAGTTTTTTTCCATTTACTCCAAGTTAT TAATTTGTATAACTTCTTCTGACCAATTTTTCTGGTGTAGTTTTTCTTCATTGTTGTACTTGTACCCAAATAAAGACATG CTAAGGAAATTTAAGTTACTAAACAATAATAGTAATATATCATGATTGAGTAAAATTATGAAAATTAAGATGTCATAAAG TAAAATACATAGTCAATAAGTATAGCTATTGATGAAAATACAGAGTAAGGCAACTTGCATCTAACCAATTTTCATATTTA TTCTCATATTTTTATTCACGTTTCTATCCTTTTTAATGTGTCTATATCTCTAATTCTTTATGTTAATATTTCCTTATTTA TCAGCATCGTATGGCAGGATTTGCTGCTATTGAAATAGCGCAAAAGGTATCCAAGGCTTGGCGTACATTTCAATCAGAAT GGAAAAATTCTAACAAAAGCAACTCAAACTCGAAGAGTGGCAAAAGGTCTAGGAGAAGGGATAGAATTAATATGCCCAGT CAGAATAGGGGAGGCGCAGGTTGTAGCACAAGTAATGCCATGGAAACATCTTCATATAGCATTGTAGATGATAGACCATC CAGCCGTTCCATGTCATGGAAAGATATTTACTCATTTGCTGTTAGATGGAGACAGATTTCTGAGCCATGTGATCCTGTTG TTTGGGTTAACAAGCTAAGGTATTATTTCAGACCTTATTATCTGTCTATATTTCCACGTTTTGTTGTTCAGGCATTTAAT GATTTTACATGTTTTTCTTCATATTTGGAACGTCCATAGATTCTCAAATAGCATGCCTCTGATCTCTCTAATTAATAAGG TTTTAGCTTTTTTGGGTATAGAGAGAGGAAAGGGAGAGAATAGAATCTGAAGTTAACGTTTACTTTATATAAGATGGTGT TGAGAGCAAAAAAATTTAGGAAATCTGCTAAAATCTTTCGATTATTCGATTTACGATTAACACCCCTTCCTGGTGTTGAC TACTATGCTTTGAAGTGTAATCAAATTCAGATCTTGCTTTGGATTTTGAATTAGCTCCTTTGCTTTGCAGTGAAGAGTTT AATGCTGGATTTGGTTCTCACACGCCGATGATTCTGGGACAAGCCAAAGTTGTTCGTTACTTTCCTAACTATGAAAGGTA AAGAGCCTGATTTAATTCTATATTTACTAACTGGCTTTGGAGTGCTCATTCTTTTTCAATACCACAGGACCTTAGATATT GCAAAGACTGTGATGAAAGAAAGGTCATATGTCTACAGCAAAACAGATCAGATCATTCATCTTTCCAAAGATGGGAAATT AGAAAAGGTGATTTGTGTATTGACAGATTTAGACTCTGTATTTCTGTTGCAGCAAGAGGCCTCTACCATGACCTGTAATC TGCAATTTTTAACTATTTTGTTTAATTTCATTAACTAATTGATATAGGACCTCACTTCTAAATATATTTGAAGCTTAAGA ATATTTAGTAATTTATCAATTTTTTATGAATAAATTCTTCAATATTATCTTCTCTTGCTTGTGATTGTTACCGATTCTTA ATGGCCTCTTGTAGATATTACAGGTTACTCGTTGAACATTGTTTGATTAATAATATTCTCTGTTCCATGCTTTTATGAAA ATGAAACTTAATTTTTGGTGTGCAGATCATGCATGCAAAATCATGCTCTGAGCTTTATAATATTGTTGGTGAGGATTTCT GGTCGGCTACGTGGTGCAACAGTACTGCATTTGAAGGGTAAGTGTGCATAGTGCAAGTGATGCCTTGGGAACATCTAAAG TAATGTTTTCAAAATGCTTATATCTGGATGTTAATGATTCTTCAGGAAACAGCTTGAAGGGACAAGGATAACACTCGTTA AAATGTGAGCTAGCTAAAAATTTGAAGTTATTTTGTTCTCCAATTTCCTTGTTTTGATACTGAACTTTACCTTTCTTTCC TGTTTTATTGTGGGAATGGATGAATACTTTTTTAGGGGACAACATGGTTTTGACTTTGCAATTAGAACACCTTGTACACC TGCTAGATGGGAAGATTATGATGCAGAAATGGCAATGGCATGGGAAGTATGTTTTTCCAAACAACTTATATTTTTAGTTG GTAGATATGACCCTATATGTCCACTTTACGTGGTTGTTTCTGAAAAGAATGTTTCTTTTGATTTTTACCAACGATCCCAT GCTGTCTATACTCTATATCATTAAACGATATTGATGCTTCTGTATATTGTCTAGAAATTTTCCTACATTGATTGTGATAG TTTACCTTGTTTCCATCTTGGGACTTCATCTGTTAGGCTCTCTGCAATGCTTACTGTGGTGAAAACTATGGATCTACTGA TTTTGACATTCTTGAAAATGTGAGAGATGCAATTCTAAGGATGACATATTACTGGTACGACATTGTCAATGCATGTAGAA CGCTTGTATCTCTTGGAGGATTTGCAATCAGTTCCGTAAATCTGTCTGCTCTGTTTTTCAGGTATAACTTCATGCCACTG TCAAGAGGAACTGCTGCAGTTGGATTTGTAGTCATGCTGGGTCTGTTGCTTGCTGCTAATATGGAGTTCACAGGAAGCAT CCCACAGGGTTTCCAGGTTGATTGGGAAGCTATTCTGAACATGGATCTAAACTCCTTTATGAATTCCGTCAAAAGTTGGC TATACCCATCTCTGAAGGTGACAACCTCATGGAAAGACTATCCTGATATCGCATCAACTTTTACAACAACAGGATCGGTT ATTGCTGCCTTGAGCTCTTCTGATGATGATTGA
CDS sequence (LotjaGi2g1v0406300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCTGCTACCTCCCAGCGAGCTGAGCTGGCCAGGCTCTGCAGCTCCAAGGACTGGTCCAAAGCCATTCGCATCCT CGATTCGCTCGTTTCTCAGTCTGGTGCAATTCAAGACATCTGCAACAGAGCCTTCTGTTACAGCCAATTGGAGCTTCACA AGCACGTAATCAAGGATTGCGATAGAGCTCTTCAGCTTGACCCTGTGCTTCTTCATGCTTACATTCTGAAAGGTCATGCG CTTTCTGCGTTGGGAAGGAAATCTGATGCTGTACTAGTATGGGAGCAAGGTTATGAACACGCTCAGCATCAGTGTGCAGA TTTGAAGCAGTTGCTAGAACTTGAAGAGCTTTTGGTGAAAGCAAAACAAGGCAACGATAATGGATTGTCCATGCTACAAG CCGAATCAGATTCTCAGAGGAATGGGAACGTGTCTGAAACTTGTGAGAATCAAGATAGGTTGAGTGACCAAGCTGAGTCA TGTGGCAACACAAGTGATAAATCTGATATCTTGCTGAAGTCTGCTGATAAATTTGACTCGAACAATGAATTAAATAATGA AGATAGAGAGTCTAGTAAATGCGATGGCCAATTGAATGGAACCCCTGATGTTATTGATAAATTGAGCTATAATTCTGAAT CATGCAATGACTCAAGTGACGCCTCTGAATCATGTGATAAAGTATTTACCACTGGTGAATCTAGTGACTCGACTGATGTC ACTGAAATTATTAGAAAGCCAAGTAGTAAGTTTGTTTTTCCCCATGAAAAAAACAACGAAGCAAGGAAAAATAAGAAGTT CTGCGTTTCTCGGATTTCAAAGGCAAAGTCTATAAGTGTAGATTTCCGGCTTTCACGGGGAATAGCAGAGGTTAATGATG GAAGATATGCTCATGCCATATCCATTTTTGACCAGATACTTAAAGAGGACCCTGCATATCCTGAGGCTCTGATAGGAAGA GGAACAGCATATGCATTCAAAAGAGAACTCCATGCTGCTATAGCTGATTTTACAAAGGCAATACAATTTAATCCATCAGC TGGTGAGGCATGGAAGAGGAGAGGTCAGGCCCGGGCAGCCTTGGGGGAGTTTGTTGAGGCTATTGAAGACTTGACTAAGG CATTAGAGTATGAATCCAACTCAGAAGATATTTTACATGAGAGAGGAATTGTCAATTTCAAGTTTAAAGAGTTTAATGCT GCAGTTGAAGATCTTTCAGCTTGTGTGCAGATAGACACGGATAATAAGTCTGCCTTCACATATTTGGGTTTAGCATTATC TTCAATTGGTGAATTTAAAAAAGCTGAGGAAGCACATCTAAAATCAATTCAACTTGATAGAAATTTCCTTGAAGCATGGG CACACCTGACTCAGTTCTATCAAGATTTATCGAAGCCAACAAAAGCTCATGAATGTCTAAATAAGATGCTACAAATTGAT GGGAGGTTTGCAAGAGCTTATCATTTGCGTGGCCTTTTATTTCATGCAACGGGCGAGCATAGGAAGGCTATCAAAGATTT GACAATGGGGTTGAGCATTGATGGTGCCAACATTGAGTGTTTATATTTACGAGCTTCATGCTACCATGCTGTTGGACAAT ACAAAGAGGCGGTCAAGGATTACGATGCTGCACTGGATTTGGAATTGGACTCAATGGATAAGTTTGTTCTCCAGTGCCTT GCGTTTTATCAGAAAGAGATTGCTCTTTACACAGCCTCAAAGTTTAACAGTGAGTTTTGCTGGTTTGATATTGATGGAGA TATTGATCCACTTTTTAAGGAGTACTGGTGTAAGAGACTGCATCCAAAGAATGTATGTGAAAAGGTTTATAGGCAACCTC CTTTGCGGGAGTCTTTAAGAAAGGGGAAGCTTAGAAAGCAAGAATTAGCTCTTACAAAGCAGAAGGTTGCTCTTATACAG GCTGCAGACTCCATTGGCAAGAAAATCCAGTATGATTGTCCTGGTTTCCTACCTAATAGGCGTCAGCATCGTATGGCAGG ATTTGCTGCTATTGAAATAGCGCAAAAGGTATCCAAGGCTTGGCGTACATTTCAATCAGAATGGAAAAATTCTAACAAAA GCAACTCAAACTCGAAGAGTGGCAAAAGGTCTAGGAGAAGGGATAGAATTAATATGCCCAGTCAGAATAGGGGAGGCGCA GGTTGTAGCACAAGTAATGCCATGGAAACATCTTCATATAGCATTGTAGATGATAGACCATCCAGCCGTTCCATGTCATG GAAAGATATTTACTCATTTGCTGTTAGATGGAGACAGATTTCTGAGCCATGTGATCCTGTTGTTTGGGTTAACAAGCTAA GGACCTTAGATATTGCAAAGACTGTGATGAAAGAAAGGTCATATGTCTACAGCAAAACAGATCAGATCATTCATCTTTCC AAAGATGGGAAATTAGAAAAGATCATGCATGCAAAATCATGCTCTGAGCTTTATAATATTGTTGGTGAGGATTTCTGGTC GGCTACGTGGTGCAACAGTACTGCATTTGAAGGGAAACAGCTTGAAGGGACAAGGATAACACTCGTTAAAATGGGACAAC ATGGTTTTGACTTTGCAATTAGAACACCTTGTACACCTGCTAGATGGGAAGATTATGATGCAGAAATGGCAATGGCATGG GAAGCTCTCTGCAATGCTTACTGTGGTGAAAACTATGGATCTACTGATTTTGACATTCTTGAAAATGTGAGAGATGCAAT TCTAAGGATGACATATTACTGGTATAACTTCATGCCACTGTCAAGAGGAACTGCTGCAGTTGGATTTGTAGTCATGCTGG GTCTGTTGCTTGCTGCTAATATGGAGTTCACAGGAAGCATCCCACAGGGTTTCCAGGTTGATTGGGAAGCTATTCTGAAC ATGGATCTAAACTCCTTTATGAATTCCGTCAAAAGTTGGCTATACCCATCTCTGAAGGTGACAACCTCATGGAAAGACTA TCCTGATATCGCATCAACTTTTACAACAACAGGATCGGTTATTGCTGCCTTGAGCTCTTCTGATGATGATTGA
Protein sequence (LotjaGi2g1v0406300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPATSQRAELARLCSSKDWSKAIRILDSLVSQSGAIQDICNRAFCYSQLELHKHVIKDCDRALQLDPVLLHAYILKGHA LSALGRKSDAVLVWEQGYEHAQHQCADLKQLLELEELLVKAKQGNDNGLSMLQAESDSQRNGNVSETCENQDRLSDQAES CGNTSDKSDILLKSADKFDSNNELNNEDRESSKCDGQLNGTPDVIDKLSYNSESCNDSSDASESCDKVFTTGESSDSTDV TEIIRKPSSKFVFPHEKNNEARKNKKFCVSRISKAKSISVDFRLSRGIAEVNDGRYAHAISIFDQILKEDPAYPEALIGR GTAYAFKRELHAAIADFTKAIQFNPSAGEAWKRRGQARAALGEFVEAIEDLTKALEYESNSEDILHERGIVNFKFKEFNA AVEDLSACVQIDTDNKSAFTYLGLALSSIGEFKKAEEAHLKSIQLDRNFLEAWAHLTQFYQDLSKPTKAHECLNKMLQID GRFARAYHLRGLLFHATGEHRKAIKDLTMGLSIDGANIECLYLRASCYHAVGQYKEAVKDYDAALDLELDSMDKFVLQCL AFYQKEIALYTASKFNSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRESLRKGKLRKQELALTKQKVALIQ AADSIGKKIQYDCPGFLPNRRQHRMAGFAAIEIAQKVSKAWRTFQSEWKNSNKSNSNSKSGKRSRRRDRINMPSQNRGGA GCSTSNAMETSSYSIVDDRPSSRSMSWKDIYSFAVRWRQISEPCDPVVWVNKLRTLDIAKTVMKERSYVYSKTDQIIHLS KDGKLEKIMHAKSCSELYNIVGEDFWSATWCNSTAFEGKQLEGTRITLVKMGQHGFDFAIRTPCTPARWEDYDAEMAMAW EALCNAYCGENYGSTDFDILENVRDAILRMTYYWYNFMPLSRGTAAVGFVVMLGLLLAANMEFTGSIPQGFQVDWEAILN MDLNSFMNSVKSWLYPSLKVTTSWKDYPDIASTFTTTGSVIAALSSSDDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1009 | 1009 | 0.0 | – | |
| Phobius | 1 | 911 | 911 | - | – | |
| Gene3D | 3 | 152 | 150 | 1.0E-14 | ||
| ProSiteProfiles | 37 | 104 | 68 | 7.913 | ||
| SMART | 37 | 70 | 34 | 0.28 | ||
| SUPERFAMILY | 37 | 550 | 514 | 8.06E-43 | ||
| SMART | 71 | 104 | 34 | 44.0 | ||
| MobiDBLite | 134 | 166 | 33 | - | – | |
| MobiDBLite | 178 | 194 | 17 | - | – | |
| MobiDBLite | 178 | 200 | 23 | - | – | |
| MobiDBLite | 216 | 236 | 21 | - | – | |
| Gene3D | 248 | 384 | 137 | 7.5E-27 | ||
| ProSiteProfiles | 280 | 551 | 272 | 51.704 | ||
| ProSiteProfiles | 280 | 313 | 34 | 7.523 | ||
| SMART | 280 | 313 | 34 | 18.0 | ||
| Pfam | 285 | 346 | 62 | 2.6E-4 | – | |
| ProSiteProfiles | 314 | 347 | 34 | 9.912 | ||
| SMART | 314 | 347 | 34 | 0.0032 | ||
| ProSiteProfiles | 348 | 381 | 34 | 9.676 | ||
| SMART | 348 | 381 | 34 | 6.4E-5 | ||
| SMART | 382 | 415 | 34 | 12.0 | ||
| ProSiteProfiles | 382 | 415 | 34 | 6.992 | ||
| Gene3D | 385 | 464 | 80 | 7.8E-11 | ||
| ProSiteProfiles | 416 | 449 | 34 | 8.142 | ||
| SMART | 416 | 449 | 34 | 0.67 | ||
| ProSiteProfiles | 450 | 483 | 34 | 6.254 | ||
| SMART | 450 | 483 | 34 | 93.0 | ||
| Gene3D | 465 | 567 | 103 | 1.4E-17 | ||
| ProSiteProfiles | 484 | 517 | 34 | 7.906 | ||
| SMART | 484 | 517 | 34 | 0.008 | ||
| ProSiteProfiles | 518 | 551 | 34 | 8.85 | ||
| SMART | 518 | 551 | 34 | 5.4E-4 | ||
| Pfam | 519 | 548 | 30 | 0.0036 | ||
| MobiDBLite | 688 | 726 | 39 | - | – | |
| Phobius | 912 | 939 | 28 | - | – | |
| Phobius | 940 | 1010 | 71 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0406300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…