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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0407000 |
| Transcript ID | LotjaGi2g1v0407000.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT5G67380.1 casein kinase alpha 1; Swiss-Prot: sp|Q08467|CSK21_ARATH Casein kinase II subunit alpha-1; TrEMBL-Plants: tr|I1MVP2|I1MVP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0407000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90424868..90430544) extracted from Lotus japonicus Gifu genome v1.2.
CCAAGAAGAAAGAATCCGCCCAATTGGGGAAAAATCATTTTAAACCAACACTGAACCAAACACACTTTTTTCCCTTCGTT GCGAAGCATTGATGACATGGCATCATGGCACGTGAGAGATATACGCACGAACCATCATCACACAACTACTAATACCACTC TTTTCTTCGCTCCTTGCTTGCTAGCTATCGTGCACCTCACCCTGCTAGCGTGCGCATGTCCCCACCCATCGAATCAAACG CCACCATCGCTTCAAATCCGATCACCCATCGTTGAGATCTCAGATTCAGAGCCTCAATCCATGTCGAAGGCGCGTGTTTA CACCGACATCAATGTTCTTCGTCCCAAAGAGTATTGGGATTACGAGTCTCTCACCGTTCAATGGGGGTAACTTTTCTCAA ACCCTAATCTCTCTGCTGTTTTTGTTCACCAAAAGCACAATTCATGGTGAATGAAAATTTGTTGTGTGAATCTTAGTGTG TGTATGTAGTTTCTTAGCTGTTTGTGTTCTTCCTCGTTTGTTTTTCGATGATTTCAATAGCTTCAACAATTTCATCTCGC ACATCATAGTTACCAATTTAGGGATAGGAATTATCAATTATGCCATTAGATTTGTAGTTATATCCTTTTGATTGGATCTT ATGCCTTTACATAGCTGATGAGGAATCACCTACTGTGAAATTAATTGATCAATTTTGTTCTCTGAATCCCAAATTCAGCT TCTTGTGCCAATTTTTTCCCTTGCTCACTTTGTTTCAATGGAATTGGTGGTTTTTGGAACCTTTAGGCTCTGTTTGTGAG TTGAATTTTGAAGGGAAGAGTAGGGAAATGGGAGACTTATGTGAAATCGAACCCTCCCTTGTTTGTGAATTTTGTAAAAT GGGGAAGGGTTCGGGGAATTTCTGAAAACCTTTCAAGACTCTTATTCAGTTATTTTGTTGAGCTACCCCAATTTGGGGTT TTTTTGTGGAATTTAAAAATTTCCAAACACGGGGATGACTTCTTAATGTTAGTCCATATGTGGTTAATGTTTTAGTACCC TTGATCCCCTTCCTATTACATTTTTTGTTCGAAGAATATTTTTTTTCCGTTAACATGCTTTATGGTTTCTTTCAGTGATC AAGATGATTACGAGGTTGTGCGAAAAGTGGGAAGGGGGAAATATAGCGAGGTTTTTGAAGGCATAAATGTTAATAGCAAT GAGCGCTGTATAATCAAGATTCTCAAGCCTGTCAAGAAGAAAAAGGTCAGACTTTTTTCACTTGTGATGCTTTCTATCCT TAGTTGGGAGGACCTGCAAATTTTAAATTAAGTCAGACAGGGTTGGTCATAGTTGTATTGTACAACAATCATTTCCAAAA TAAAATCCAACTTGAACTTCATTATAGGAAAACATTAAACATAAGAACTAATAATACATAATATAATCAGTATTCGAAAT TAAGAATCTAAATGTATGGCCAAGACTTCTATCAATAAATAAGTAAATAAATAAATAAAGAAGTGGAAGTCACAATGATA TGATTTGCAACATCTATATGGTAATGGTTTAATTACATAGCTTTGTTTTGGAGACTGGCATGTAGAGTTTCAGGTGAGAT ATGAATATCCATACTAGGCTTGTCAATAGTGTGTGAAAGCGGCGCTATTGTGGCTGAGCAGCCCCTGGCCGCTACGGCGA GTCCCATAGTGGAGCGGTTGATTGTCGCAGCCGTCACTGCTGGAATCGTGGCTGTTTTTGCGAACTTCGCAGCGCTAGAA CGAAGATAGGGGAAAACTAAAAAATTACCCTCATAATTTGAAGATTAGGGTAAAATTTTAGGCGTAATATTGGGTTTCTG TCAAAATAAAAGAAGGGTAGTTTTGGGTTTCCCATAAAATTGATTAAGAACATTGTTTTTCCCTTCGCACATCCTGCCCT TCCCGATAAAGCGTCTACCGTCTTACCTGTTCTGCACCAAGCGACAGCCATCCAGCCACCGCTTATGAACATTGTGTGGG TATGGTGCGGGATAAGTATTATAGGTAATACGTCTAAACCCTCACATGTTCCCACAAATTTTTGCTGGTAATCTAGACAT AGATCACAACACATTTGATGGGTAAAAAACCTGACCCGTTGGTTCAAATCTAATGGCCATGATATGTGGGTATGCTATAA CATTGATACATGTTTCTGCCAATTTGATTTTCTGAATCGTTAGAATTGTTAAAATCAAATTCTTCTGGTCAAACCAGAAT CCACCGTATAATGTAAATCTTAGGCCATGAAACACACCTTATGAAGTTCACCTTGGTTCCCATTTTTTAGAGCAACTCCA TATGAATTAGAAACATACCTTCAGTTTTTATTCTTTTTTGTTTTTGTTTTAAATTGTTTGATGTACTGTGCCATTTCAAT TCTTCTTAGAAGTATTTCTTATTTTGCAAGCTCTTTAACAATCCACAGATTAAAAGAGAGATAAAAATACTTCAGAACCT TTGTGGAGGCCCAAATATTGTCAAGCTTCTTGATATTGTCAGAGACCAACATTCAAAAACTCCTAGCTTGATATTTGAGT ATGTCAACAGTACAGACTTCAAAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTATTACATATATGAGCTCCTA AAGGTAATGTGATACCTCCTGCACCTTACTTGGGACTGTTATTATATGTGTCATCTCCATAATCAACATACTGGTCTTCC CTTATATAATTTTCTATACTCTGTCTTGAATAAGATTCCTACATGAATTCTGCGTTCGGTTCATGCATATAAATCATAAA AATTATTACTAATATATCAGCCTTTCATTGTACCTGAGTGCTTTAGTTTTAAATTGCAGGCCTTGGATTACTGTCATTCT CAAGGCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGATCATGAGTTGCGGAAACTTCGCTTGATAGATTG GGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGAGTAGCTTCAAGGTAACATCATTTTAAAAATAGAC ATGTTCTCGAAGCACATGTGTGAAATAGAAAAGCTCAAACGAGTGCATTCATATATGGCTTAAATCAAAATCAGCAAGGT TTGACTCAACTTAGATTTTTCAAAATGTACAATTGTTAGGAAACTGTCTAAATTTTTTATTTTCGTCATAAAAGTAATTC TGGAGTTCTGGAGGCATGAACCAAGAGTACATCAGTTATATTAAAATTTAGCACAAATACTTTTTTTTCTCAACTTAAGT TATAATCATTAATATACATTTATTTTATTATTGTTGTTACATTTTGAGTATTATACCTTGAAATTACATATTGATTTATT TGTAGATTTAAACGTGTTGGCCGACACAATGATTTATCATATCTTACTATGAAGTAAGATTTAAAATAGGCTTTAATCCT ACCAGCCCAACCTTTTTCTCAACCTATTAGCCTATAATCATGTTGCCCTGTTTATAATATGTTTGTTTTATTATATTTTG GGTCGTTGCCTATAACTCTGTTGGCCTATGTACTTTAAGAGCAAATTATGAAATACTCATTTAAACAAGCTACCAGGCTT TTAAGATTAGACTAGGCCTTGAAAAATCCTACGACAGTTAAAAGACCAGACTTGGGTCTCAAATTTTTTTAATTAGACCA AAGCTTAGCCTAAACCAGCCTATTCGACCCCTAGTTGTTGGTTAATATATGTGACGTTTCTTTCAGTCACTAAACATAGC GACACTTTAAGATTTCTTGCAGTCACTAACTCATTTGTGCAAGATAAATCTTATCTACAGATTATAGCACAAAGTTTCCT GACATTTGTGTAAAATATTGATCGACTTATGGCTGGAATAGTCCTCATTTGCCTAGGTTTTTATTCCATGCTTTCAAGCT TCTTGCAGTGTTTGCCAAGTATGTTAAAATTAACCTATGGTTTGATGTGATTTTAGCGGTTTCTACTCCTTTGAGCTGTC TCCCTCTTATTTTTTCAGGCCGAAACAAATTCCTGCTTTTTGTTTGATTACCTAAACCCAAACCCGACACTGAACTTCTG TAAACACTTATTAGTAACATGTTGCAAGTTTGTAATCTTCTATAAAAGACCATACTTAGCTTATTTTATTACAAGTATTT GCTTACCATTACAGTTCACTTATTTGATTACAAGTATTTGCTTACCATCACAGTTCACTTATTTGATTTCTTATTTACTT AACTTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATTTGATTCTGAAATCATAGG TTAGGTTAAAACTTGACAAAGGAAAAATGGTTATTTAAATTTCGTAGACTTTTATTTTATAATTGCTATGTGAGCGAAAG ATGTGGTTTCTATATTTCTTAAATGCCACCTATCAAAACCAATTGTCATATTATGGGTACTCTGTTTCTCAGATATTTTA AGGGGCCTGAGCTTCTAGTTGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTCGGCTGCATGTTTGCTGGA ATGGTGAGAATTATTGCTGCAAGTTACTGGTTATATATGGCATACTGTTGACATTATTTACGCAGATAGTTGAGCATCCA CAAATGTAGATGTATAATTCTGGGTCATAATTTGTTCGTTGTACTTTTATGTAGATATTTCGCAAAGAGCCTTTCTTTTA TGGTCATGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTAATATTCATGTTGGTTTACCATTACTTTTGAAGGTTTA ATTATCTTGCTAATGCTTTACAAATTAATTTCATGTTTTAGTTCCAGAATATGATATCTTGTGATCTATTCAATGTAGGT TTTCAAAGCATAAAATCATTGATCATTTGTTTAGCATATCAAAATCATAGACCAGATTTAAGTTTTTATTAGATATTGTT CATTATTATTTGTTATCTGCATTCTGCAGGTACTTGGAACTGATGAACTGAATGCATATCTTAATAAGTATCATCTGGAG CTTGATCCTCAACTTGATGCACTTGTTGGAAGGTATCGTCTTCTAGCTGATCTTCCATTTATTTCACTGCAAGTTGAATT TAGTTAATTCTCAACTTTTTATCAAAAATTCTTCTGTGGCAATGTAATATACTAATCTCTGCCCAAGCTCTCTTTGGTAG ATAGATGAAGTGTTACTACCTTAATACATCATACATAATTTATATCTGACTATTTTCTTTGACAGGCACAGTCGCAAGCC CTGGTCTAAATTTATCAATCCTGATAATCAGCACCTTGTGTCTCCTGAGGTCACTTGAGCAATTTTCTAATCTGGCATTG ACATTGTATTTAGTGTATTCTGCAATTTAACAATTATTGTTTGTGTAGATTTTTATTTCTTTCCATATGTCTGACATGCA GGCAATTGATTTTCTTGATAAGCTCCTTCGGTATGATCACCAGGACAGGCTAACAGCAAGAGAAGCAATGGTAATGTTTA AGGGCTCATTAATTCGTAGTTCTATTTTTTCCAACTGAGTTGTTTTTTAAATTGAGTGCTCTAACCTTTTGCTGCCATTT TGGTGCATATCCCGCAGGCACATCCTTATTTTTCTCAAGTAAGGGCAGCAGAAAGTAGCAGAATGAGGACACAGTAA
CDS sequence (LotjaGi2g1v0407000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGAAGGCGCGTGTTTACACCGACATCAATGTTCTTCGTCCCAAAGAGTATTGGGATTACGAGTCTCTCACCGTTCA ATGGGGTGATCAAGATGATTACGAGGTTGTGCGAAAAGTGGGAAGGGGGAAATATAGCGAGGTTTTTGAAGGCATAAATG TTAATAGCAATGAGCGCTGTATAATCAAGATTCTCAAGCCTGTCAAGAAGAAAAAGATTAAAAGAGAGATAAAAATACTT CAGAACCTTTGTGGAGGCCCAAATATTGTCAAGCTTCTTGATATTGTCAGAGACCAACATTCAAAAACTCCTAGCTTGAT ATTTGAGTATGTCAACAGTACAGACTTCAAAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTATTACATATATG AGCTCCTAAAGGCCTTGGATTACTGTCATTCTCAAGGCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGAT CATGAGTTGCGGAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGAGT AGCTTCAAGATATTTTAAGGGGCCTGAGCTTCTAGTTGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTCG GCTGCATGTTTGCTGGAATGATATTTCGCAAAGAGCCTTTCTTTTATGGTCATGACAACCATGATCAGCTTGTCAAAATA GCTAAGGTACTTGGAACTGATGAACTGAATGCATATCTTAATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACT TGTTGGAAGGCACAGTCGCAAGCCCTGGTCTAAATTTATCAATCCTGATAATCAGCACCTTGTGTCTCCTGAGGCAATTG ATTTTCTTGATAAGCTCCTTCGGTATGATCACCAGGACAGGCTAACAGCAAGAGAAGCAATGGCACATCCTTATTTTTCT CAAGTAAGGGCAGCAGAAAGTAGCAGAATGAGGACACAGTAA
Protein sequence (LotjaGi2g1v0407000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKARVYTDINVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPVKKKKIKREIKIL QNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI AKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINPDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFS QVRAAESSRMRTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 333 | 333 | 1.6E-238 | – | |
| PANTHER | 1 | 333 | 333 | 1.6E-238 | – | |
| SUPERFAMILY | 9 | 323 | 315 | 8.63E-78 | ||
| CDD | 15 | 319 | 305 | 0.0 | – | |
| SMART | 34 | 319 | 286 | 7.4E-76 | ||
| ProSiteProfiles | 34 | 319 | 286 | 43.255 | ||
| Pfam | 34 | 319 | 286 | 1.0E-65 | ||
| Gene3D | 34 | 110 | 77 | 3.2E-113 | – | |
| ProSitePatterns | 40 | 63 | 24 | - | ||
| Gene3D | 111 | 319 | 209 | 3.2E-113 | – | |
| ProSitePatterns | 147 | 159 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0407000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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