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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0408600 |
| Transcript ID | LotjaGi2g1v0408600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ and TAZ domain protein; TAIR: AT5G67480.1 BTB and TAZ domain protein 4; Swiss-Prot: sp|Q9FJX5|BT4_ARATH BTB/POZ and TAZ domain-containing protein 4; TrEMBL-Plants: tr|I3TAA7|I3TAA7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0408600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90573436..90580682) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAAATAAATTGGTTTTGTCTTTCGTAAATAAAATAAAAATAAAAATAAAATAAAACGTGCACATTAATTTCTTTGCT GTTGTTGATATTTTGATTTTATTTTAGTATATTTATAGCAAGGAGCGTGAGTGAGTGACAAACAGCTAGGCTCTGTTTGT TTGTGTGTTTATATATCCTTCCGCGTAAATCTCATTCTCCTTGGCAATTTCCTTCCCGCGGAAGAGAGAGAGAGAGAGAA AAGGGCAAACTCTGATTCAGAATCAGAAACCCTCGTCTCTTCCTTTCTTCTTAATTTGCATTGTTCTTCATTTTTTCAAG GGAGGAGGAAGTGCTTCAAAATTACAGAACGAAACGCTTCAAAGTTCAAACGAACAAGGTAACCTGATCCATTTTTCTCT GTGAATTCATTTCTGCCATTATGAAGATCTTGTTTATTTGGTGATTTTTTATGCTTGCTATTTCAATTTCTTCTGCGTTG ATTATGATCTGCAATTGGAAAATTTGTTGAATCAAATATTTAAATGTCTTATAGATAAATTTGTTGATCTTAGTTAGATC CTCTGTTCTGTAGCTTTTGTATAATTTTGATTTCGTTCATTTAGCAAATTAATCCTGATTAGTTGAAGAGATTAATTTGT GAAAACCTCCAAGGGTCGTTGTTGGAAGTGTGAACCGAAGGGTGCTGTTGCATTAATGATGGCAAATTGTCAATGAAAGT GAACCATCACGGTTAACCAATTAGTTTGATGAATAATAAAACAGTGCAATTTGGCTATCAAAATCAATCATAAGAACATC TCTAATGGTAGTTTAAATACATACTTATACGAGTATTTATTACTATTGGAGTACATTTTCAATTCTAACATGACAAAGAT GAGTATGTGGGAATAGATACTCCACACTAGACTTGAAAAGTGAGCTTGTATTTATTACAAGCACTTACCGTTAAGAACAT CTACCTCCATCATATTTAAGTTGCAAATATAATTAATTAAAATGGATATAAATAATAAAATATATAAATGTGAAGTTGAT GGTGGGATCCACTATAGAAACTTTTAAGAGTTGTTGGGTTGAAGTAAAAAGTTAGTCAAATGTCGTAGATAATGTGGCTT ATGGGGAATTGTAAAAATTAAAGTGTAGATATTTTAGTGAGTATGATGAATGTAGATGCTAATCATGTAAGACTAAGAGG GAGGGTGTATTTGATGATCATGGAAGATCCGAGGGCTTGATGTTACATTTTAGATGTTGACATTAGCATTGTACTTTCTG GGTAGTTGTTTGGCATATTATTTGTCTACAACTCATGGGCAAGATAGTTTTCAAAAAAAAAAAGGGGGATTGAATGGTGG AATATAAATAGACAATATTATAAAACACATAGTTATTAAATTAAAAAAAAGATTGATTTAAAAAAATTATTGATAAAGAG CAAGTATATTTTTTGTGCAACCTTGATATATTCACATTTAGCTTCACTTACAACTCATTTTTACTCAGTTTTTATTTCAA TTTCTTTTTTTTCCCCTATCACATCATTCCTCATAAGTTTCATTTTTCACTCTTCTCTTTTTATATGTATCTCTAGTAGA ACTGTGAAGGAGTGTTTACATTACATTTTTTATTTTTCGTGTGTGCCTAAGTAAACAACGTAGTACATAAAGAAGGCAGA GACTAGGGTGGGTTTTGCCCATAAAGAAAAGTATTAATATTAAAGTATCTAAGATTGATTTTAAAAAATTATTCACAAAG AGCAACTATAGCAACCTTGATATATTCACATTTAGGGTCCGTTTGGTGGTCAGGATAAGATATGATAGGATATAATATGT GAACAGGATAGCAACAGGATAGGATAAGAGCAGGATAGACTCTTATCATATCATGTGTTTGAGGTGCACATGATAAAGAC AAGATATGGTAAAGAAAAATGTATCAGATTTATATTTGAATAAAAAATATATTTAAAATTGATCATTCTATTAAATTTAA TTCATTTACATTTTCATGAATGCGTCTATATTTTAAAATAAATAAAATTAATTTAAATTTTATTAATTAGTCTTTTTTTT TGAAGATAGCCTATATTTCAAATAAAATTATGCAGTTAACCAATTGGTTTTCACTTAGTTGTGACACGTGATAATTAACA ATAAAAATTAACTAAATTAAGAATATTATTATTTCAAAAGTACTTTATGTTTTAATTATAAATTATTATACAAGTAGATA AGTAGTTTTAAATAATAGGAGATGAAAATAAAAAATTAATCTATTACTATTAAAAAATCAATATTTGTAATCAATGGTTT TCACTTAGTTGTGACACGTGATAAACAATAAAAATTAACTAAATTAAAAATATTATTATTTCAAAAATATTTTATATTTA AATTATTATATAAGTAGATAAATAATTTTTAAATAGTAGGAGATGGAAATATTAAATTAGTCTATTATTATTAATAAATT AGTATTTGTAAGTGAGTAGTCTATTTTACTATTTATGAATAATAATTTTATTTATTTTTTATTTTAGTTAAATTAATATT TTACATTTATTAATTAATATTATTATTAATTATATAATATTAAAATAAATTAATTTGGAGTTAGGATACTGAAATAAAAT ATATAACTGGTATCCTATCCTGTTCTATCCTAGCTCTCCCCTCAAGATAACTTTTACACATGATTGACAGGATAGGATAG GAGACAGGATAGTGTTATCCTATCCTGCTGACGCAACAAACAACATATAACAACAGGATATGATTATTATCCTGTCCTAT CCTATTTTGTCCTGACCACCAAACGGGCCCTTAATTAGCTTCACTTACAACTCAATTTCACTCGGTTTGTATTTCTTTTT TTTTCCCCTATCACATCACTCCTCCTCATAAGTTTCATTTTTCACTCTTCTCTTCCTATATATTTCTCTAGTAGAACTGT GAAGGAGTGTTAACATTGCATTTTTTCTTTTTTGTGTGTGCCTAAGTAAACAACTAGTACATAAAGAAGGCAGACTAGGG TGGGTTTTGCCCATAACGAAAAGTATTAACATTAAAGAATCTAATATATGTGATTCATGTGGGTCAAATATCAGCCCACA CAAGATAAATACTTGGACCCATTTGATCAGGACTGACCCGACATATACATAGGCCTAAAATGAGATTTTATGTACGAGTT AGAATAAATTACTAATTTACTATTGACAAAAAAAAATTCTAAAATTATTAGAAATTTATTTGCATTTTTTTAATATGAGA AAATTGGTGATTAATTAAAATTCATGGCAATTAGTAATAGGGGCTTGGGTATGCTCCAATGTTTTTAATATTGAATATTG AAATATAGTATTTTAAGTATGAAAATTCGCTTTTTAAAGACTTTGATCTCTATCACACTCGAGTTAAACATGATTGACTC AGTAATGGATGCATGTGGCATGAATTTTTGACATGAAAACTGACTAAAATAATAATGTGAGGATTAGCCGGCACTTCATT TGAAGTCTCAAGTTTTTTTTATGGTAGAAGAGGTCTCAAGTTTTTTCCCTTTAAAATTAAGTTTATAAAGAAAAATACTT CATTGTGTTGAATATTATTAATAAGAGAAATCAGTAATGATAAAGAAAATAAGGTCTACTGGTTCAGAGGAAAATCTTTT CTTCTAACACTGCCTATCAATTACCATGAGTTAATTTTTTTTTAAAAATTCAAGTACCATAAGTTAATGTTTATACTGTC CATAAATTAAACGATTTTCTTTCAAAATCAGTAAAAGAAATTAAACATTTTATTGATGAAATTTTCTCTTGATATTGCAT TAAAACAATTTTACAATCCATAATTTAACAAAAGCGGTGAAATCTTATCCATACTTACGTGGAAAAGCTTGTCATAATCA AACAACAAAAAGAAATAGTTAAGAGTCAAAATATGTAAAGATTTGCATTAATTTGTACGCGTTTCAATGTAAAAAAGTTT CCAACTGTCATCCAGTCTTATACTACTCATTAAATGATGTAATTATATATAGGATTTATGACAATTTGACCAAAAAATAG AAGGAATTAATGCATCAATATTTTGTTTGAACTTGGAATTGGATAAATTCAAACGACATAAACGGACAAATAAGACATCC TTATCCATAATGCTAGTATAAATATTAGTAAGAACTTGATTTTATGTTCTATTCATGCAGCAGTGAAGAAACTGATGATG TCTAACACTGACAGCAATTGTTGTAAACCACCCCGGAGCGGTGAGAAACGCATTCCGGCACCACCGCCTTTGCCCCGTTT TACAGCAATTGGTTGTCCTTGTGACTGCCTGGTGACGAATCAGTATTCAGCACAGAAAGGGTCAGCAACAAGAGATTTGT GGGAGCGTCTCTTTGATGCAGGTTACAGAGCAGATGTTTGCATTAATACTGAAAATGGTGGCATTGTTTATGCTCACTCT AACATTCTTGTAAGTTCATTCACCTTGCTTGGTGTTGTACCATAGATACTTATTCTGGTTTTGCAAGCACATGTATTACT GGTAAAGCTACATCAATTTTACTGCAATGAATTATGCTCATGTTAACATGTTTGAATAATTGGATCAACGTTGTGACAAT TGATTTTGGTAAAATTGTTCATCCTATAATTGAATTGAAGGTGACGGGATTTATGTTTGGTTACATGGGAAAAGTAATTC TTGTAGGGTGATGTTGTGACTGCAAGAATTAGATTTTGTAACTTCATTCCAATATTAATTTTACAGTTAGAATCAATTGC AAGAAAAAAAAAATTCAAATCCCTGGAAATTGATTTTGAGATTTTCACTGATGTAGTAGGCAAATATATTCAGTTTTTCA GGTTCATGTTACTGCTTTAACTATCCAGATACTAACTAGAGTACTAGATCTGCTCAGTCAAATAAGAGCTGGATATATTG GATTCTGAGTCCATGGAGGCATGGAGTGCTTTGTTTGTATGATCTGCATCATCATGGAATGCAGATGTTTTGTCATTAAT CATTAATACTAGACAGACTGATCTGTATGTTATCTTGAATTCAATTTTTGTGGATACCACTCACTTTGTCCTATATGAAC AGGGCATGACTTCTCCCGTTATCAGAGGCATGCTGAAGCAAGCAAAACGTCACAATCGATGGCGATCAATCTCAATCTTT GGTGTTCCTCATGACGTGGTTCGAGTTTTCATTCGATTCCTGTACTCTTCTCGGTATGTTTGATCCCTCAATTTACCTCA AAATTCTCAGAATGTTTGTGTAGAAATCATTAGCTTAACCTATGCTGTGGGGTAAGAAGGTCTGATAATATTCTCTTGAA ATTTTGTTTGCTCAAAGCAATTGCGTGATTGATTTGTTCGACTCCTTCAATTTGTTTCGTTTCTGATACTCACGTTGCAC AATATAATTGGCAATGGAGTTCCTCGCAAATTATACAGCAAAACTTGTTCTGCATTACTCATATTGAACATAAATGTGCT GAAAATTTTGCTTTGCCCTTCTTTCATAGTTTGGAGAAAGAAGAAATGGAGGAATACATCCTACATTTGCTGGTGCTGTC ACATGTATACATGGTCCCAGACTTGAAGCGTGAGTGCGAACAGAAGCTAGAATTGGGATTACTCACTATAGATAATTTAG TTGATGTATTTCAACTTGCATTACTGTGTGATGCTCCACGGCTCAGCCTCATTTGTCACCGTAAGATACTAAAGAACTTC AAAGCTGTTTCTGTGTCCGAAGGATGGAAAGCAATGAAGCAGAGCCACCCTATTCTAGAAAAGGAAATTCTGGAGTCAGT GATTGACGAGGAAAATGTAAGGCTGTCTTTCCCCCCTCATTTTAGTTTTAGCATGTTTAGATAATCTTCTCTTTTTCTCA GATCAACTTCAACGCACAGATTACTTATAGGAGCTTCTCTTAGAATTGATTTTATCTTTAGACATCATTGCATAATGTGT TCCCAAACATGCTATCTTACACTATGTGTAACTTGATTAGTGCATTGCCTAATTGCCTTTCGATCAACTGATTGCTCAGA GCAAAAAGGAGAGGATAAGAAAAATCAATGAAAGAGAGATATATCTGCAACTATACGATGCGATGGAAGCGCTTGTTCAC ATATGTAGAGATGGTTGTCGAACTATTGGCCCTCATGATAAGGACTTCAAAGCAAACCAACCATGTAGGTATGCCGCCTG CAAGGCATTGGAGTTGCTTGTTCGACATTTTGCTGGCTGCAAGTTGAGAGTCCCAGGGGGTTGTGTTCATTGCAAGAGGA TGTGGCAACTATTGGAGCTACACTCTAGACTATGTGCTGATCCTGATTTTTGTAGAGTTCCGTTATGCAGGTAATAATAT TGTTTATGGTCTAAGATTTTGCTTAGTGCAGTTCAATCATACAACTTAATTGTTACAAAAACCTTGTCATTTCAGGAACT TTAAGCAGCGAGTGTCAAAACAAAGCAAGAAAGAAGAAATCAGATGGAAAATATTGGTTGAAAAGATCTTGAGAACAAGA GGAATTGGGATAGCACCATGCTTTAGGCCACAATGACTATGGCTTTTTGTTGGAGATATAGGACTTAGATCGCAGCTATT GATCTAAGACCAGCTTCAAATTGTATATTTGATGTATGTTTTGTGTAACTGTAATTAAGAAATCTCCCTCAAGGATTAAG TGCTGCTCCTCTCTCTACCTTGATTTTAAAAGAATGTGAAGCGGAGGAACACTTTCCACCTATTTTCTCTTTTTTCCTGC CGTTGTTTTGTCTAATTATTTTCTTATGCTTTCCTTGACTAAATGGTCAAACTATATATTTAAAGATTAATTTTAAATAT TAGTTGGATATTTGTATATTTAAAATGGACATTGCTTGCCATTCATTTTTGAAGTTCTTCAATAAAAAATAAAAATGTTC TTCTTCCAAGAAGAAACCAAGTACCTCAAACTCATCTCTTTGAAAGAACAGAAAAAATCACCTCAATTAAACTTTCAATC TGGTCTGATATATGTTTGATGCCGGAGTATTGAGTTTCCCAAAATCTACAGGCACGCTAGTGATTGGTGAGTGATGACTC TAATAAAGGGTGATCTTTAGCTCTGTCCATAGGTTCTTGAAATACAATGCTAAGAACACGTTGTTAATTAGTGTTGCAAC AAATTGTGTACCTTTAGATTTCCGTTGGCAACTAAGGAGATGTTGGC
CDS sequence (LotjaGi2g1v0408600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCTAACACTGACAGCAATTGTTGTAAACCACCCCGGAGCGGTGAGAAACGCATTCCGGCACCACCGCCTTTGCC CCGTTTTACAGCAATTGGTTGTCCTTGTGACTGCCTGGTGACGAATCAGTATTCAGCACAGAAAGGGTCAGCAACAAGAG ATTTGTGGGAGCGTCTCTTTGATGCAGGTTACAGAGCAGATGTTTGCATTAATACTGAAAATGGTGGCATTGTTTATGCT CACTCTAACATTCTTGGCATGACTTCTCCCGTTATCAGAGGCATGCTGAAGCAAGCAAAACGTCACAATCGATGGCGATC AATCTCAATCTTTGGTGTTCCTCATGACGTGGTTCGAGTTTTCATTCGATTCCTGTACTCTTCTCGTTTGGAGAAAGAAG AAATGGAGGAATACATCCTACATTTGCTGGTGCTGTCACATGTATACATGGTCCCAGACTTGAAGCGTGAGTGCGAACAG AAGCTAGAATTGGGATTACTCACTATAGATAATTTAGTTGATGTATTTCAACTTGCATTACTGTGTGATGCTCCACGGCT CAGCCTCATTTGTCACCGTAAGATACTAAAGAACTTCAAAGCTGTTTCTGTGTCCGAAGGATGGAAAGCAATGAAGCAGA GCCACCCTATTCTAGAAAAGGAAATTCTGGAGTCAGTGATTGACGAGGAAAATAGCAAAAAGGAGAGGATAAGAAAAATC AATGAAAGAGAGATATATCTGCAACTATACGATGCGATGGAAGCGCTTGTTCACATATGTAGAGATGGTTGTCGAACTAT TGGCCCTCATGATAAGGACTTCAAAGCAAACCAACCATGTAGGTATGCCGCCTGCAAGGCATTGGAGTTGCTTGTTCGAC ATTTTGCTGGCTGCAAGTTGAGAGTCCCAGGGGGTTGTGTTCATTGCAAGAGGATGTGGCAACTATTGGAGCTACACTCT AGACTATGTGCTGATCCTGATTTTTGTAGAGTTCCGTTATGCAGGAACTTTAAGCAGCGAGTGTCAAAACAAAGCAAGAA AGAAGAAATCAGATGGAAAATATTGGTTGAAAAGATCTTGAGAACAAGAGGAATTGGGATAGCACCATGCTTTAGGCCAC AATGA
Protein sequence (LotjaGi2g1v0408600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSNTDSNCCKPPRSGEKRIPAPPPLPRFTAIGCPCDCLVTNQYSAQKGSATRDLWERLFDAGYRADVCINTENGGIVYA HSNILGMTSPVIRGMLKQAKRHNRWRSISIFGVPHDVVRVFIRFLYSSRLEKEEMEEYILHLLVLSHVYMVPDLKRECEQ KLELGLLTIDNLVDVFQLALLCDAPRLSLICHRKILKNFKAVSVSEGWKAMKQSHPILEKEILESVIDEENSKKERIRKI NEREIYLQLYDAMEALVHICRDGCRTIGPHDKDFKANQPCRYAACKALELLVRHFAGCKLRVPGGCVHCKRMWQLLELHS RLCADPDFCRVPLCRNFKQRVSKQSKKEEIRWKILVEKILRTRGIGIAPCFRPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 12 | 373 | 362 | 3.6E-199 | – | |
| PANTHER | 12 | 373 | 362 | 3.6E-199 | – | |
| Gene3D | 43 | 161 | 119 | 1.6E-15 | – | |
| SUPERFAMILY | 50 | 162 | 113 | 7.3E-15 | ||
| Pfam | 59 | 162 | 104 | 3.7E-13 | ||
| CDD | 66 | 166 | 101 | 5.87509E-52 | – | |
| ProSiteProfiles | 66 | 134 | 69 | 11.771 | ||
| SMART | 66 | 166 | 101 | 1.8E-13 | ||
| Gene3D | 167 | 241 | 75 | 3.6E-12 | – | |
| CDD | 168 | 225 | 58 | 2.07162E-5 | – | |
| Coils | 223 | 243 | 21 | - | – | |
| Gene3D | 242 | 361 | 120 | 4.2E-21 | ||
| SUPERFAMILY | 243 | 343 | 101 | 1.23E-22 | ||
| SMART | 243 | 335 | 93 | 1.6E-37 | ||
| Pfam | 251 | 334 | 84 | 5.1E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transcription coregulator activity | A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to either activate or repress the transcription of specific genes. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class modulates interactions of DNA-binding transcription factor with other transcription coregulators. | ||
| Molecular function | Histone acetyltransferase activity | Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
Expression pattern of LotjaGi2g1v0408600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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