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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0409700 |
| Transcript ID | LotjaGi2g1v0409700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidyl-prolyl cis-trans isomerase-like protein; TAIR: AT5G67530.1 plant U-box 49; Swiss-Prot: sp|Q9FJX0|PPIL2_ARATH Peptidyl-prolyl cis-trans isomerase CYP65; TrEMBL-Plants: tr|A0A151SC33|A0A151SC33_CAJCA Peptidyl-prolyl cis-trans isomerase-like 2; Found in the gene: LotjaGi2g1v0409700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90654005..90658132) extracted from Lotus japonicus Gifu genome v1.2.
AAGAAACCCGGCCCGAGAACTTCCGCACAACGGTGTTGAGGGAATCGTAGAATCTCTCTGGGAAGGGTGTGACTTGAGGT CCGAGAAGAGAAACCGAAGCACACAAAACAAACTCAAAAACAGAGATATCGTTCTGAAAATCGCCGGAAACTGAAGCACA GACCAAAGTCCAATAGAGATTTCGTTGGCGTGTGAAGCTGCAAATTTGTATCATATCACGGTAGAGGTAGTGATTACGAA AGGAGAAAGAAACCCTAAAAGATGGGGAAGAAGCAGCACAGCAAAGACAGAATGTTCATCACGAAAACCGAGTGGGCAAC GGAATGGGGAGGCTTCAAATCCAAAGACAACCGCACCGTCTTCAAGCGTCTTCCATTCTATTGCTGCGCCCTTACATTCA CGCCGTTTGAGTATCCCGTTTGTACACCTGATGGCAGTGTTTTCGATGTTATGTCAGTATATTCTCTTCTATTCTCTTCT CTGCTTAGTTATTGCAAAGTTTGCTTGATTTGATAACTTGATTTTGCACTTTGGCTTCAGGAACATCACTCCTTATGTTA TCAAATATGGTAAACATCCTGTTACCGGAACTCCGTTGAAGCAGCAGGATCTCATTCCACTCAATTTCCACAAGAATTCA GAAGGTACTTCTTAGAGAACAATCATTTTCTGTTGTTTTTTTATTGGATTATTTGTATTTAAATCCCTGCAAATTCAAAT ATGATGAATTGATGTTGAATTATCATTGTGGCTAGTCATCCTTTTGATTCTAGTGTACTATTGGAGAGGTGTCTCACTTA AAATATGACAGTTTAATAAAATTTGTGTGTAATATAGTAAGCTAACGAGCATAAAATTGGTTTTAAGGCGTAAATTTTTG TTCTGATAAATGAGATCCTTAGTCATTAAAAACCAATAACAAACAGTTAGACTCTAGAATTATTGGATGTTGGTCTCATG ATGGAATGCCAATATCTGTACTGTTTTTCAAAAGAACAAACTAAACTATTTCTGATGGTGAAAGTGAGTTATTTTGCTTA TAGGACTTGCCGTGATATTCGTAGGTTGTCTTGCATACTATTTAGCTATTTTAATTGAAATTACAGTGATAATATTCTTG TGGAGCTGTGGTATTGTTCAAAACCTACGTTTTCTCATGTTAAATATGTTATCTTTCTGCAATTACTTATTCGGGGAAGG GGTTGGACTGGTTAGCATTTACGGTTTTCCTGAATGTTTTTTTGCTTCTGTTTGCTAGCTGTTTCTCTATTAACCTTTCT ACGTTATTCTGCAGGAGAATTTCAGTGTCCTGTGCTAAATAAAGTTTTCACTGAATTTACACATATTGTGGCGGTGAAGA CAACAGGAAATGTGTTCTGCTATGAGGTTTGTTTTTTTTATAAGAATCCTTAATGTTAACAATGCTAATTTACTTGTGTA TATGATATTTATGTTTATGTAAGTTCTTATGGGAAATAGGCCGTTAAAGAGTTAAACATTAAGACAAAAAACTGGAAGGA GCTTCTCACTGATGAACCATTCACTAGGGATGACCTTATAACAATTCAGGTGAGTTGGCTTTCAACGAGAACATTTTCTC CTTTCCTTTATTTTTCATTGGCTTGATTTCACATCGTATGTTTGTCTGTGTTCACTGTACAGAATCCTAATGCACTTGAC AGCAAGGTTCTTCTGGATTTTGATCATGTTAAACACAATCTGAAAATTGACGATGAAGGTATGCTACACCCTGCAGCTCC GCCATCACTTATCAGCTATTAATCATAGTTTGTCTTGATGCTGCTGCTTTTGTTATATTTAGTATAGCCATGACACCTTC TGTTTTCTTTTCTCAGAACTACAGAAAATGAGTTCGGATCCAACATATAATATAAACATGTCTGGTGATCTCAAGCAAAT GTTTCAGGAGATTGGAACTGAGAAAGGAAAAGAAACCGCGATGCATGGAGGAGGTGGTGGCAAGGCACGGAAATTAAGGG CTGATGCACTTGCTGCCGTCATAGCTGCACGGTCACGTCTTAAAGAGGATTCCGAATCAAATCCAAATGAAGAAGCCAAA GCTCCTCAGGCGTTTAGTATTGTGGATGCTGCATCTGCCTCAGTACATGGAAGAAGTGCAGATGCTGCTAAAGCCTCATC AAGTGATAAAACTGCAGCTAGAATAGCTATGCACAAGGCTGGTGACAGGGCACCGGTGAATGCAAAGCTGGTGAGTTTCC TAGATATAACCTCTTTTTGAAAAAGGAACACATTTAGGTAGCTCTTATGCATAATTAAATGACCCTACTGATGTTCCATT TCAGGTAAAAAGCCGTTACACTACTGGTGCTGCTTCCCGGTCATTTACTTCAACATCTTTTGATCCAGTTACAAAAAATG AATTTGAATATGTCAAAGTGGAGAAGAACCCAAAGAAGAAGGGATATGTGCAACTGCATACAACACATGGTGAATTGAAC ATTGAGCTGCATTGTGATATCGCGCCCAGGGCATGTGAGAACTTTATCACACTTTGTGAACGTGGATATTATAATGGAGT TGCTTTTCATAGAAGCATTAGGTAAGATGGCCACCTTTGAGTCTTTCTTTCTTGAGGAAATCAAGCCTCACGCTTATGAT ATTTTATAATCATTTTTATGTAGGAATTTTATGATACAAGGCGGTGATCCTACTGGCACTGGTAAAGGAGGTGAATCAAT ATGGGGAAAGCCTTTTAAAGATGAACTTAATTCCAAATTGGTTCACTCTGGAAGGGGTGTTGTCAGCATGGCAAACAGCG GGCCACACACTAATGGTTCCCAGTTTTTTATCTTGTACAAGTCTGCGCCTCATCTAAACTTTAAACATACCGTTTTTGGA GGAGTTGTTGGAGGCCTGACTACATTAGCAGCAATGGAAAAGGTTCCTGTGGATGATGATGACCGACCTCTGGTGAGTGA TTCTTTTCACTGTTGATGCAATATTGTTTCTGTTTTTCATGGTTTCATTCTTCTCATATCATTGAATTTCAACCTGTATT TGCGAACATATGATCATTAAATAAGGCTCTGCTTTAGAAAAAGTAGATTCTTCTGCTGTTGTACATGTGTTGTCATCGTT TGCAAGACTATATTCTTTATTTTTGGCATCTGTTTAGAGTTTAGGGTTGAAGATTTTGTTTTAGACTCTCTCATGTGCAT TATATACTAGTGTCTCATTATGCTTCAAGAGCTTGATTGTTTAATGGTGGCTAGTGAAGAGCTGATATTTTAAACAACAA TGCTCGTGGGGGCAATTTATGTCTTCTGAATGATCCATTAACCATTAATGTAATATATTTTTTTTGTCTCGCAGGACGAA ATCAAGATAACAAATGTCACGATTTTTGTCAACCCTTACACTGAACCGGACGAGGAAGACGAAAAGGATAATGCCAAAGA GAAGAATGCAGAGGATGAAGATAATGTTTGTTCTGAAACATTTGAGATATCTCCTACTGATAATTTTTCACTTATACAAG GCTTTTGTTAACTAATCCTGTGGCCCTTTTTTCTAACTTTTCAGGATAAGATTGGCTCATGGTATAGCAATCCCGGTGCT GGTATATCTGAATCTGGAAGTAAGGGGGTTGGCGGTGGCGTTGGCAAGTACTTGAAAGCTAGGAGTGCTCAAGCTGAATC TGCTAATGTTGACACCGGTACAGCCGTTGGAAAGAAAAGAAAAGCAGTTGTCAGTAGTGAATTTAACGATTTTTCTGCTT GGTAATCATCCCAATTTTGTACAATTTGTAAAAAGTGTAAAATTTTCTTGTGCCGATAGCTTTACAGTGGGAAATTTGAC TGAGAAAGAAGATTTTTTTTCACGCCATTCAGAATTAGTAGCAATGAAGTTTATTTGATACAAGAATAGTGGATCATTTT GTCTCGAATGTGCGTTCCCCCACTCATTCTGTTGCTGCGTTCACAGAAATCAGAACTCCATGATTTTCTCATGGATATGA TTGATTCTATTTTACAAAACCCATATAGTATTTAACATTTTATTCTTTATCTATTCAATTCATTGAATTTTCCATGATGT AAATATTTGAATCGCTTTGTTCCTCAGTCCTGGGGTGCCATCCATTCC
CDS sequence (LotjaGi2g1v0409700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGAAGCAGCACAGCAAAGACAGAATGTTCATCACGAAAACCGAGTGGGCAACGGAATGGGGAGGCTTCAAATC CAAAGACAACCGCACCGTCTTCAAGCGTCTTCCATTCTATTGCTGCGCCCTTACATTCACGCCGTTTGAGTATCCCGTTT GTACACCTGATGGCAGTGTTTTCGATGTTATGAACATCACTCCTTATGTTATCAAATATGGTAAACATCCTGTTACCGGA ACTCCGTTGAAGCAGCAGGATCTCATTCCACTCAATTTCCACAAGAATTCAGAAGGAGAATTTCAGTGTCCTGTGCTAAA TAAAGTTTTCACTGAATTTACACATATTGTGGCGGTGAAGACAACAGGAAATGTGTTCTGCTATGAGGCCGTTAAAGAGT TAAACATTAAGACAAAAAACTGGAAGGAGCTTCTCACTGATGAACCATTCACTAGGGATGACCTTATAACAATTCAGAAT CCTAATGCACTTGACAGCAAGGTTCTTCTGGATTTTGATCATGTTAAACACAATCTGAAAATTGACGATGAAGAACTACA GAAAATGAGTTCGGATCCAACATATAATATAAACATGTCTGGTGATCTCAAGCAAATGTTTCAGGAGATTGGAACTGAGA AAGGAAAAGAAACCGCGATGCATGGAGGAGGTGGTGGCAAGGCACGGAAATTAAGGGCTGATGCACTTGCTGCCGTCATA GCTGCACGGTCACGTCTTAAAGAGGATTCCGAATCAAATCCAAATGAAGAAGCCAAAGCTCCTCAGGCGTTTAGTATTGT GGATGCTGCATCTGCCTCAGTACATGGAAGAAGTGCAGATGCTGCTAAAGCCTCATCAAGTGATAAAACTGCAGCTAGAA TAGCTATGCACAAGGCTGGTGACAGGGCACCGGTGAATGCAAAGCTGGTAAAAAGCCGTTACACTACTGGTGCTGCTTCC CGGTCATTTACTTCAACATCTTTTGATCCAGTTACAAAAAATGAATTTGAATATGTCAAAGTGGAGAAGAACCCAAAGAA GAAGGGATATGTGCAACTGCATACAACACATGGTGAATTGAACATTGAGCTGCATTGTGATATCGCGCCCAGGGCATGTG AGAACTTTATCACACTTTGTGAACGTGGATATTATAATGGAGTTGCTTTTCATAGAAGCATTAGGAATTTTATGATACAA GGCGGTGATCCTACTGGCACTGGTAAAGGAGGTGAATCAATATGGGGAAAGCCTTTTAAAGATGAACTTAATTCCAAATT GGTTCACTCTGGAAGGGGTGTTGTCAGCATGGCAAACAGCGGGCCACACACTAATGGTTCCCAGTTTTTTATCTTGTACA AGTCTGCGCCTCATCTAAACTTTAAACATACCGTTTTTGGAGGAGTTGTTGGAGGCCTGACTACATTAGCAGCAATGGAA AAGGTTCCTGTGGATGATGATGACCGACCTCTGGACGAAATCAAGATAACAAATGTCACGATTTTTGTCAACCCTTACAC TGAACCGGACGAGGAAGACGAAAAGGATAATGCCAAAGAGAAGAATGCAGAGGATGAAGATAATGATAAGATTGGCTCAT GGTATAGCAATCCCGGTGCTGGTATATCTGAATCTGGAAGTAAGGGGGTTGGCGGTGGCGTTGGCAAGTACTTGAAAGCT AGGAGTGCTCAAGCTGAATCTGCTAATGTTGACACCGGTACAGCCGTTGGAAAGAAAAGAAAAGCAGTTGTCAGTAGTGA ATTTAACGATTTTTCTGCTTGGTAA
Protein sequence (LotjaGi2g1v0409700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKKQHSKDRMFITKTEWATEWGGFKSKDNRTVFKRLPFYCCALTFTPFEYPVCTPDGSVFDVMNITPYVIKYGKHPVTG TPLKQQDLIPLNFHKNSEGEFQCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEPFTRDDLITIQN PNALDSKVLLDFDHVKHNLKIDDEELQKMSSDPTYNINMSGDLKQMFQEIGTEKGKETAMHGGGGGKARKLRADALAAVI AARSRLKEDSESNPNEEAKAPQAFSIVDAASASVHGRSADAAKASSSDKTAARIAMHKAGDRAPVNAKLVKSRYTTGAAS RSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQ GGDPTGTGKGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGGVVGGLTTLAAME KVPVDDDDRPLDEIKITNVTIFVNPYTEPDEEDEKDNAKEKNAEDEDNDKIGSWYSNPGAGISESGSKGVGGGVGKYLKA RSAQAESANVDTGTAVGKKRKAVVSSEFNDFSAW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 575 | 575 | 2.3E-238 | – | |
| PANTHER | 1 | 575 | 575 | 2.3E-238 | – | |
| ProSiteProfiles | 35 | 108 | 74 | 28.848 | ||
| SUPERFAMILY | 37 | 104 | 68 | 1.32E-15 | – | |
| CDD | 38 | 110 | 73 | 3.31135E-44 | – | |
| SMART | 39 | 101 | 63 | 1.6E-10 | ||
| Pfam | 39 | 90 | 52 | 2.0E-4 | ||
| Gene3D | 40 | 93 | 54 | 3.3E-13 | ||
| Gene3D | 329 | 508 | 180 | 1.8E-74 | ||
| SUPERFAMILY | 350 | 509 | 160 | 3.36E-64 | ||
| Pfam | 350 | 500 | 151 | 6.1E-49 | ||
| CDD | 350 | 508 | 159 | 3.18841E-106 | – | |
| ProSiteProfiles | 354 | 501 | 148 | 32.667 | ||
| PRINTS | 364 | 379 | 16 | 8.6E-24 | ||
| ProSitePatterns | 385 | 402 | 18 | - | ||
| PRINTS | 390 | 402 | 13 | 8.6E-24 | ||
| PRINTS | 433 | 448 | 16 | 8.6E-24 | ||
| PRINTS | 448 | 460 | 13 | 8.6E-24 | ||
| PRINTS | 461 | 476 | 16 | 8.6E-24 | ||
| MobiDBLite | 505 | 553 | 49 | - | – | |
| MobiDBLite | 512 | 531 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein peptidyl-prolyl isomerization | The modification of a protein by cis-trans isomerization of a proline residue. | ||
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi2g1v0409700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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