Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0457000 |
Transcript ID | LotjaGi2g1v0457000.4 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | ARM repeat protein interacting WITH ABF2 protein; TAIR: AT5G19330.1 ARM repeat protein interacting with ABF2; Swiss-Prot: sp|B9DHT4|ARIA_ARATH ARM REPEAT PROTEIN INTERACTING WITH ABF2; TrEMBL-Plants: tr|A0A151TJY1|A0A151TJY1_CAJCA Vacuolar protein 8; Found in the gene: LotjaGi2g1v0457000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95049439..95055660) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAACTTGAGGGTCGGCAAGATCAGTGCCTCCCGGAGGCGGAGAGGGAGAAGAAAGGCCAGAAGAGGAAGCTCGAACA CCGTCAGATCTACGTTTCTCCCACCCTATTCTCCGACGTCTTGGATCACGTTTCAATTCTCCACTCCACTTTCTCCTCCA ATGATTCCGATCGAGCTGCTGCTAAGCGCGCCACTCACGCCCTCGCCGATCTTGCTAAAAACGGTATTCATTTATTCCTT TCCTTCATTCCATCGTTCAATTGCGCTGATTCATTCATTCGTTTTGCAGAGGAAGTTGTCAATGTCATCGTTGAAGGAGG CGCCGTTCCGGCTTTGGTTAAGCATCTTCAACCGCCTCCTTTACCGGAAAATGACCGCATCATCATGCCGTTTCAACACG AGGTTGAGAAAGGGAGTGCGTTCGCACTCGGTCTTCTTGCCGTTAAGGTAACTTCACTTTTCTGCTTTCTCGTTGTGACT ATTAGTATTTCTTAGGAATCATTACACCTGAACTTGTTTATGCTTCCAATTCTCCAATTTGCTCAACTCTATAGTACTCA TGTTTGATATCATTCTCCAAACTCAGATTAAGCTTACTAGCTTTGTTTCAAATGCTATTTATTCCCTTTTTCAAAATAAA ATCGTGTGCTTAGTTTATTTTGGCTAAATGATGTGAACGATTTTGGAAGCTTCAAAGATAATGCCAGGGGGAGGTCTAAT TTGTCATGTAATTCCGAACCTGATCTAGCTTTTTTTGTTTCCAAATGCCTTCTACAGCCAGAACATCAACAGCTCATCGT TGACAATGGTGCCTTGAAGCATCTTGTTGATCTTTTGGAGAGGCATAATGATGGCTTAACGTCTCGGGCCATTGCTAGTC TAATTCGTAGGGCTGCAGATGCCATTACGAATCTTGCTCATGAGAACAGCAGTGTTAAAACCCGAGTCAGGTTTGCTTCT TCAAGGACTTCCACGTAATACATACATTTAGTCTGAATTGTTACGAACTTGTGATTATCTGGAGTTAATTTGTAGGATGG AAGGTGGGATTCCACCTCTTGTTCATTTGCTTGAATTTGCCGATATAAAGGTGCAAAGAGCAGCTGCTGGTGCATTGAGA ACTCTGGCCTTTAAAAATGATGAAAATAAAAACCAAGTACGTGGTCTTTTGCTGAAAGTTTGATATATATATTGACTTCC ATTTCCATATGATATGAGTAAGTCATATAACATCTTGACTTGTCAGATTGTTGAATGCAATGCGCTTCCGACTCTGATTC TAATGCTCCGTTCGGAAGATGCTGCTATTCATTATGAAGCGGTATTGCTTTTGTAACCCTAATTTATACCTGCTTAATGT TGCAATATTGTTGAGTTTGGTCTTTACACTTATCTTACCGGGGACATCAATGTTTTTTTTTTTGTACCACAGGTTGGTGT GATTGGAAATCTGGTCCACTCTTCCCCTAATATAAAAAAAGAAGTTCTTCTTGCTGGAGCCTTACAACCTGTTATTGGAT TGCTTAGGTATAATCTCAGCTTAGACCTGGAAAACCACAGTGATCTCTTTACCCCTTTCCAAACCCTGCCCTCAATTTGT AATGGTGTTATAATATCTCTGAAGTTCCTATTTTTCTTGGCAACACATATACTGCTGAAAAGGATATATATCTATTAACC TATGGTGATGATGTTTTATCTAACAGCTCCTGTTGCTCTGAAAGTCAGAGGGAAGCAGCCTTATTACTTGGACAGTTTGC AGCAACTGATTCAGACTGCAAGGTAAGCACAAACTTTAGTTTCTAATTACATCTTTGTGACTTGTCTCAAGGGTACGGGA GTGGGAGGTAGAGAGGGAAACGACCTTGACACCTCTTGCCTATACTTAATGATTAGATGTGGAAGAGGGGTGGGAAAAGG CAACAATAGACGCCTGAACTTTAGTTTGGAGCAATTATTTTATAACTGCATCTTAAAAGGCTGGGTTCTTTGTGCTATTT AATTCTTTATAGGTAGGTGTTAGCTACTGGGTCGATGCTTCACGTATTGTGCGGCACCATTTTTAATTCTCACGTTCTCT CATTTGGTTTTTGTAGATTCACATTGTACAGAGAGGTGCTGTACGACCTTTGATAGAGATGCTTCAGTCCCCTGATGTTC AGCTCAGAGAAATGTCTGCCTTTGCATTGGGAAGATTGGCTCAGGTAACTGTTTTCCTTGTCTTTTCCATGTTATAACTT ATAATTCACGTGTGTAAGTTGAGTAGGTAAAATTATCATTATATCTATGAAAAATATTTGTTGGTCTTTTTCCTCTTTCT AACGTAGTTTTTGAATCCATAACATATATATACTCTAAAGATTTCCATCTTTGTGTTAGACCATAGTTATCGAATTGTGA TTCGTATTGTGTATCGGAAGACCCTAATTTTTGAATCATTAATCATATCGTTTAATGTATCATAAGATGCAGATACAAAA AATTTAAGTCATAAATTGAATAACAAACTGATATATCATATAAATACTTCAAAATAATCAAATATCCAAGCCAAAAAAAA AAATAAGAAGAAAAATAGTTAGTGGTTGCACGAAGTTCAAGTGGTAAACACTTAACCCCTCAAAAACAAATGCAAGAATA GAGCACGTGAATAAGGGGGGACTGAGTGGTGCTGAAGAACAAAGGGCGGGGTACTAGGTTAACCAATTGGTGACAGGGGC GGGGGGAAATGGTGTTAAAGAACATGGGTGGGAGACCAAGCGGTGATAGAAAAACAAATCAGTCCCTGTTTGCAAGGAAG AAAGTGGTGCACATGAGAAGGTTGAGGTTGGACCAAATTAGAGTATTGTTTATAGTATTTTTTAACTTTGGTCATTAGGA GTTGAAGACTTTTGAAAAGAAAATTGAAAAAAAAATAAACCTTAAAGGGTGAGGAAGTAGTGATTCATAAGAGCCAAGTC TCATACGATACATGCTATTCAGGGTGCATTCAGACTCAGATCGATACATACATGCGGCAAACCAAATCGAATCAGGAGGC GTATCGCACGATACAACCGATACTAACTAACATGTGTTAGAAATTATATTTAGTGAGCTTATCTTTGAGCGTCGAAGTCA TCTTATCTTACTTACTAATTTAACATATTACAGCCTTTTAAATCCAAGTTTCACGTGTAAGTTAAATTGCACGTTCCTTT TAGCACCATGAGTAATTCCTCTGGCATGAAAATATTTAATTATAAATTTCAGGACACACATAACCAAGTTTCACGTGTAA GTTGAATTGCACGTTCCTTTTAGCACCATGAGTAATTCCTTTGGCATGAAAATATTTAATTATAATTTTCAGGACACACA TAACCAAGCTGGTATTGCACACAGTGGTGGTTTAGTGCCATTACTGAAGCTTCTTGACTCAAAAAATGGGTCTCTGCAAC ATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAATGAGGTAAGCTAAACTGTAAGAATTCTATTGAAGATCTTCTAC CATTATTTACTGAAAACCAAAGTTAATTAACTTTTTTTTGTTGTTGTTTTACTTTGTCACATAGGATAATGTGTCCGATT TTATTAGGGTAGGTGGAATTCAGAGATTGCTGGATGGAGAGTTTATTGTTCAAGTAAGTTTAACTCTATCGTACCTTGGA AGTAGCTCTGGTTTCAGGATTTTTCTGCCTCTAGGCACTTTGTTTCCTATATCAATAGGAATTCAATGCTTCAGATGACT GCGAATTTTATCTTCATGAATTGGAAAAATTAGTCTTCTCGACACACTGATAGGAATTTTTTTGGATTGGAATTGGTTTC TATTTCAGGCAACTAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAAGAGAAAATTCATGGCCGTGTAAGCACAACT TCAGATTGATTTGTTTCTATATGCTTTATTACTGAAATTGACATGAAAATGACAAGGATGCTATAACTCTATCAATTTTC AGTTCCATAAGTTCTATACAACAACAACTACCAAGCCTCATCTACCAAGTTGAGTTTTATATGATGATAAAATTTGTAAT CTGTTGATTTCTCTTTGTAGGCACTGAACCATTTATTATATCTTATGCGAGTTTCGGAAAAGGCTTTTCAAAGACGAGTT GCTTTGGCACTTGCTCATCTTTGTTCTGCAAATGATCAGAGAAAAATATTTATTGATCACCACGGTAGGCATCTTAGTCA AATCTTTTGCGTAAATGTGATGTATCTTATTTCTAGCTTATAATATCGGTTTTGTGGGTGCTTTATTGCTTGTTCTATTC TATTCGAAGCTGAGCATCTACCCATGCAGGTTTGGAGTTACTTATTGGGCTTCTTGGCTCATCCAGCCCTAAGCCGAAAC TTGATGGGGCTGTGGCTTTATGCAAGTTGGCCAACAAAGCTATGACTTTGTCTCCCATAGATGCCGCCCCCCCTTCTCCA ACACCCCAGGTAGGCTTATATAAAGCTTGACATGTGACATGCCCTCAGTCTTCATTATCATAAGCTCACCTCTAGGCACT AGGAGTCCCCCCCCTCCCCCAAAGATCTCAATGCTTTACCTGTACATTGGTGTTTCTTGTTCACAAATTTCTTTTCATGT CTTATTCTTGATGATATAGGAAAACTCATGCTTCAAAAGCCAAAAGTATTAGCTGTGACTATGAGGCTGTTTACTTATTT GCATCCTATCTCTTAGCCCATATAGTAGTGTGTGGAACAATGCAGACTTTTCCCCCAGTTATGCACATAATATTGGGTTT GGCATGTTTTGATATCTCTTGGTGTTTAAAGTTGGTTTGAATATCTGTGTGATTATGTGTAGTTATAAATATATGCCATA TGGCCCTTTAATTAATTGGCATCTGCTCACTGAATAATCAATAGTTAATACGATCAATGTCTTCCATATTATACGTCTGC TACTTGCATAAGAAGCCAGCTGTCTTGTCTAAATAATTCTGGATAAGGTGTTGTTCAGAGTTGGAATATCTTTCATCCTA GACTCGTCTTCTCGCAGGTCTATTTGGGAGAGCAGTATGTAAACAATGCTACGTTGTCTGATGTTACATTTTTGGTCGAA GGTTGGTGCTTTTCATCCATATTGTTTTTCTCGTAAATGTTGCTTGGAAAATAATTGAAATGAAGTGCTGTAGCTTCAGT TGATATTGGTAGATAACCAGGTATCTTCATACTTTGCTGCAGGCAAACGGTTTTATGCTCACAGAATTTGCCTTCTCGCA TCTTCAGATGCATTTCATGCAATGTTTGATGGTGGTTATAGGGTGGGTATATATTGTTCTCCCCCAGTGAATCACATTCT CCTCCCTCTCCACCAGTATTCTCTTTGTTATTAGTTGAGTATTGGCCAAACGAAGAAAGATCTATTGTTGACCCCTCCTG ATTACATGAGAAGCATTATTTATTACCAATTATTTTGGTTTTAAAATGCTTTCTCTACCTCGTGAAAACTTTAATTGGAA ATTTGATTATTGAATAAACGGTGAATTGAAACATCAAATTAGAAGTTTATTTCTTATTTTATTCTAAGTTAAAAATCTAT GTCTGATATACAATTCATTTGTTGTATGACAGGAAAAGGATGCACGGGACATAGAGATTCCAAATATTAGATGGGAGGTT TTTGAGCTGATGATGAGGTCTGATGACGCCCCTTACAAAAGTTGTAAATTGATAGCTAGTAATGATATGTGGACAACTTA AATCTCATTGTTTCATCTTTGTCCAGATTTATATATACTGGATCAGTTGATGTCACCCTTGATATTGCCCAAGATCTCCT CCGAGCAGCTGATCAATATCTTTTAGAAGGGCTTAAGAGACTCTGCGAATACACAATTGGACAGGTTAGCTAAAAGATGT GGTTTTGTTGCACAACACTATTAAACCTGCACTAGTTTTACACATGAAGGTGGATTCCTCATTATTTGATGTTTTTCGTC GCAGGATATATCGCTGGAGAATGTGTCAAGTATGTATGAACTTTCTGAAGCTTTTCATGCTATATCGTTGAGGAAAACAT GCATCCTTTATATCTTGGAGCACTTTGATAAATTGAGTGCAAGGCCAGGGTATGATCTTACTCCCCCAATTTTGTATTTG CTTCTTGTAGATGTTTCTTTTCCTCTGTAACATATATTGGATTTTTATTATAAACAAATTAA
CDS sequence (LotjaGi2g1v0457000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACTTGAGGGTCGGCAAGATCAGTGCCTCCCGGAGGCGGAGAGGGAGAAGAAAGGCCAGAAGAGGAAGCTCGAACA CCGTCAGATCTACGTTTCTCCCACCCTATTCTCCGACGTCTTGGATCACGTTTCAATTCTCCACTCCACTTTCTCCTCCA ATGATTCCGATCGAGCTGCTGCTAAGCGCGCCACTCACGCCCTCGCCGATCTTGCTAAAAACGAGGAAGTTGTCAATGTC ATCGTTGAAGGAGGCGCCGTTCCGGCTTTGGTTAAGCATCTTCAACCGCCTCCTTTACCGGAAAATGACCGCATCATCAT GCCGTTTCAACACGAGGTTGAGAAAGGGAGTGCGTTCGCACTCGGTCTTCTTGCCGTTAAGCCAGAACATCAACAGCTCA TCGTTGACAATGGTGCCTTGAAGCATCTTGTTGATCTTTTGGAGAGGCATAATGATGGCTTAACGTCTCGGGCCATTGCT AGTCTAATTCGTAGGGCTGCAGATGCCATTACGAATCTTGCTCATGAGAACAGCAGTGTTAAAACCCGAGTCAGGATGGA AGGTGGGATTCCACCTCTTGTTCATTTGCTTGAATTTGCCGATATAAAGGTGCAAAGAGCAGCTGCTGGTGCATTGAGAA CTCTGGCCTTTAAAAATGATGAAAATAAAAACCAAATTGTTGAATGCAATGCGCTTCCGACTCTGATTCTAATGCTCCGT TCGGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTCCACTCTTCCCCTAATATAAAAAAAGA AGTTCTTCTTGCTGGAGCCTTACAACCTGTTATTGGATTGCTTAGCTCCTGTTGCTCTGAAAGTCAGAGGGAAGCAGCCT TATTACTTGGACAGTTTGCAGCAACTGATTCAGACTGCAAGATTCACATTGTACAGAGAGGTGCTGTACGACCTTTGATA GAGATGCTTCAGTCCCCTGATGTTCAGCTCAGAGAAATGTCTGCCTTTGCATTGGGAAGATTGGCTCAGGACACACATAA CCAAGCTGGTATTGCACACAGTGGTGGTTTAGTGCCATTACTGAAGCTTCTTGACTCAAAAAATGGGTCTCTGCAACATA ATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGAATTCAGAGA TTGCTGGATGGAGAGTTTATTGTTCAAGCAACTAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAAGAGAAAATTCA TGGCCGTGCACTGAACCATTTATTATATCTTATGCGAGTTTCGGAAAAGGCTTTTCAAAGACGAGTTGCTTTGGCACTTG CTCATCTTTGTTCTGCAAATGATCAGAGAAAAATATTTATTGATCACCACGGTTTGGAGTTACTTATTGGGCTTCTTGGC TCATCCAGCCCTAAGCCGAAACTTGATGGGGCTGTGGCTTTATGCAAGTTGGCCAACAAAGCTATGACTTTGTCTCCCAT AGATGCCGCCCCCCCTTCTCCAACACCCCAGGTCTATTTGGGAGAGCAGTATGTAAACAATGCTACGTTGTCTGATGTTA CATTTTTGGTCGAAGGCAAACGGTTTTATGCTCACAGAATTTGCCTTCTCGCATCTTCAGATGCATTTCATGCAATGTTT GATGGTGGTTATAGGGAAAAGGATGCACGGGACATAGAGATTCCAAATATTAGATGGGAGGTTTTTGAGCTGATGATGAG ATTTATATATACTGGATCAGTTGATGTCACCCTTGATATTGCCCAAGATCTCCTCCGAGCAGCTGATCAATATCTTTTAG AAGGGCTTAAGAGACTCTGCGAATACACAATTGGACAGGATATATCGCTGGAGAATGTGTCAAGTATGTATGAACTTTCT GAAGCTTTTCATGCTATATCGTTGAGGAAAACATGCATCCTTTATATCTTGGAGCACTTTGATAAATTGAGTGCAAGGCC AGGGTATGATCTTACTCCCCCAATTTTGTATTTGCTTCTTGTAGATGTTTCTTTTCCTCTGTAA
Protein sequence (LotjaGi2g1v0457000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELEGRQDQCLPEAEREKKGQKRKLEHRQIYVSPTLFSDVLDHVSILHSTFSSNDSDRAAAKRATHALADLAKNEEVVNV IVEGGAVPALVKHLQPPPLPENDRIIMPFQHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLERHNDGLTSRAIA SLIRRAADAITNLAHENSSVKTRVRMEGGIPPLVHLLEFADIKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLR SEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKIHIVQRGAVRPLI EMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHSGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQR LLDGEFIVQATKDCVAKTLKRLEEKIHGRALNHLLYLMRVSEKAFQRRVALALAHLCSANDQRKIFIDHHGLELLIGLLG SSSPKPKLDGAVALCKLANKAMTLSPIDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFHAMF DGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIGQDISLENVSSMYELS EAFHAISLRKTCILYILEHFDKLSARPGYDLTPPILYLLLVDVSFPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 25 | 25 | - | – | |
PANTHER | 21 | 670 | 650 | 0.0 | – | |
PANTHER | 21 | 670 | 650 | 0.0 | – | |
Gene3D | 42 | 219 | 178 | 1.7E-32 | ||
SUPERFAMILY | 44 | 402 | 359 | 6.04E-56 | ||
SMART | 74 | 126 | 53 | 33.0 | ||
ProSiteProfiles | 85 | 139 | 55 | 8.732 | ||
SMART | 127 | 175 | 49 | 2.3E-5 | ||
ProSiteProfiles | 138 | 188 | 51 | 10.657 | ||
SMART | 177 | 217 | 41 | 2.9E-7 | ||
Pfam | 184 | 216 | 33 | 2.6E-7 | ||
ProSiteProfiles | 188 | 223 | 36 | 12.267 | ||
Pfam | 219 | 258 | 40 | 3.7E-7 | ||
SMART | 219 | 259 | 41 | 4.6E-6 | ||
Gene3D | 220 | 428 | 209 | 1.6E-42 | ||
ProSiteProfiles | 230 | 272 | 43 | 9.537 | ||
SMART | 261 | 301 | 41 | 1.5 | ||
SMART | 303 | 343 | 41 | 0.0014 | ||
Pfam | 303 | 342 | 40 | 2.8E-5 | ||
ProSiteProfiles | 314 | 356 | 43 | 10.867 | ||
SMART | 344 | 384 | 41 | 5.4 | ||
ProSiteProfiles | 355 | 397 | 43 | 9.887 | ||
SUPERFAMILY | 429 | 600 | 172 | 1.24E-7 | ||
Gene3D | 429 | 507 | 79 | 1.3E-5 | ||
SMART | 459 | 499 | 41 | 22.0 | ||
CDD | 518 | 633 | 116 | 2.91415E-78 | – | |
Gene3D | 522 | 666 | 145 | 1.1E-42 | – | |
SUPERFAMILY | 523 | 624 | 102 | 1.65E-29 | ||
Pfam | 524 | 624 | 101 | 1.7E-25 | ||
SMART | 531 | 628 | 98 | 8.2E-24 | ||
ProSiteProfiles | 531 | 598 | 68 | 18.307 | ||
CDD | 627 | 669 | 43 | 1.54673E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0457000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…