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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0460700 |
| Transcript ID | LotjaGi2g1v0460700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family; TAIR: AT3G43740.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|B8BB68|BAK1_ORYSI LRR receptor kinase BAK1; TrEMBL-Plants: tr|I3SMM2|I3SMM2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0460700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95396008..95397668) extracted from Lotus japonicus Gifu genome v1.2.
ATGACTTGTTTGATTTCCCTTTCTGTTTTACTTCTCCTCCTTCAGTATCCTCTCTCATCCCTCTCAGCCAACTCTGAAGG TATCTATCTATGTTCCTTTCCCTTCCACTCCTTCATTTAATTGCTATTACAATTAATTCATGAAAACTGGTTTTGTTTGT TGAAGGAAATGCTCTGCATGCTTTGAGAAGCAAGCTTTCTGACCCCAACAACGTGCTCCAGAGCTGGGACCCTACACTCG TTGATTCCTGTACTTGGTTCCATGTTTCCTGCGATTCCAACAATCATATCATTCGCTTGTAAGATCCCATTCCCATTCCC TTACTTCTTTTTCTTTTTTCTTTTTATCTCTTAATTAATTTAATCCCCTTCACTTCAATTTCAGGGACTTGGGCAATGCC AACATTTCTGGAACTTTGGCCCCTGAACTTGGACAGCTACACCACCTCCAATACCTGTAGCCCCTCCCTTCCCTTCCCTT ACCTATTTTCAAAACATGCCCCTCAACTCAACTTTACTTATTTTTCACTAACCTGGTAAAAAAATATTAATTGCAGGGAG CTCTATGGGAATAACATAGGTGGGAAGATTCCTGAGGAACTTGGTAACTTAAAAAACCTTATTAGCATGGATTTGTATGA CAACAAATTTGAAGGAAAAATTCCAAACTCATTTGCCAACTTAAACTCACTTAAATTCCTGTAAGTATCATTATATGTGA ATTGAATGATAGGTTAATCGTTTCCTGTTTTGCTCACCCTTTTTCATTCATTATGATTTATGTAGACGGCTAAACAACAA CAAGCTCACAGGATCCATCCCTAGAGAGCTCACTCATCTTAAAAATCTCAAAATCTTGTCAGTTTCTGTTTCTATACTTT TTGCAATTTCATTTGAGGTAATTGATTTATCTGCTAATTTGAAACCCCTATTGTGCAGTGATGTTTCTAACAATGACCTC TGTGGAACTATACCAGTAGATGGCAACTTCGGATCTTTCCCAGCGGAAAGGTACTGTAACTAACTGTGTTGTTGTAACTT GTAACTGTTATCCCTTTACTCTTGCTGATATTAAAAACTCCATTGACCTGTAAATCAATATGTTGTGATACTTGCGCTAG TTTAGCCATTTACAGTATAGTTTCTCACATCAAACATGTCAAATGGTTAATTTCAGTAGGCACTAGGCAGAGTCAAACCA AGATACTTTACCCCCATACACCATGGTTCTGAACTTCTGTCAAAATGCAGCATTAAAACTCTGAAAACATCAAGTGCCCA TACTTACTGCATCTGCATCACTTTCTAGAGCTTTTACCTTGTCAAGCATCTAAGCAAGACAGATAATTTGTATAAGGGCT CTAGAAACTGTCCACCAATTCAATGCCTAGCTTATATTTATCATCAAAGATTAGATGACCATATTTGACATGCATACATG AGATAATTTGCAGAGTGAGGATGGTCACTCAAACTTGAATTCGTAACTAGTATACTCTATGGCATAAAATCTAGACATTT GTAATTTGAAGCTATAGTGATTCAGATTTCTTCCTGCTGTTGGATTTACTATATGTCTTCTACTTGTGTTTCAGTTTTGA AAATAACCAACTCAACGGCCCAGAGCTGAAAGGTCTGGTTCCTTATGATTTTGGGTGCTGA
CDS sequence (LotjaGi2g1v0460700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTGTTTGATTTCCCTTTCTGTTTTACTTCTCCTCCTTCAGTATCCTCTCTCATCCCTCTCAGCCAACTCTGAAGG AAATGCTCTGCATGCTTTGAGAAGCAAGCTTTCTGACCCCAACAACGTGCTCCAGAGCTGGGACCCTACACTCGTTGATT CCTGTACTTGGTTCCATGTTTCCTGCGATTCCAACAATCATATCATTCGCTTGGACTTGGGCAATGCCAACATTTCTGGA ACTTTGGCCCCTGAACTTGGACAGCTACACCACCTCCAATACCTGGAGCTCTATGGGAATAACATAGGTGGGAAGATTCC TGAGGAACTTGGTAACTTAAAAAACCTTATTAGCATGGATTTGTATGACAACAAATTTGAAGGAAAAATTCCAAACTCAT TTGCCAACTTAAACTCACTTAAATTCCTACGGCTAAACAACAACAAGCTCACAGGATCCATCCCTAGAGAGCTCACTCAT CTTAAAAATCTCAAAATCTTTGATGTTTCTAACAATGACCTCTGTGGAACTATACCAGTAGATGGCAACTTCGGATCTTT CCCAGCGGAAAGTTTTGAAAATAACCAACTCAACGGCCCAGAGCTGAAAGGTCTGGTTCCTTATGATTTTGGGTGCTGA
Protein sequence (LotjaGi2g1v0460700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTCLISLSVLLLLLQYPLSSLSANSEGNALHALRSKLSDPNNVLQSWDPTLVDSCTWFHVSCDSNNHIIRLDLGNANISG TLAPELGQLHHLQYLELYGNNIGGKIPEELGNLKNLISMDLYDNKFEGKIPNSFANLNSLKFLRLNNNKLTGSIPRELTH LKNLKIFDVSNNDLCGTIPVDGNFGSFPAESFENNQLNGPELKGLVPYDFGC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| PANTHER | 13 | 200 | 188 | 3.5E-48 | – | |
| PANTHER | 13 | 200 | 188 | 3.5E-48 | – | |
| Phobius | 15 | 22 | 8 | - | – | |
| Gene3D | 18 | 204 | 187 | 1.7E-57 | ||
| Phobius | 23 | 212 | 190 | - | – | |
| Pfam | 23 | 63 | 41 | 9.0E-9 | ||
| SUPERFAMILY | 24 | 200 | 177 | 1.51E-39 | – | |
| Pfam | 91 | 113 | 23 | 1.1 | ||
| Pfam | 115 | 137 | 23 | 0.18 | ||
| Pfam | 139 | 161 | 23 | 1.3 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0460700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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