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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0004300 |
| Transcript ID | LotjaGi3g1v0004300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT5G10930.1 CBL-interacting protein kinase 5; Swiss-Prot: sp|Q9LEU7|CIPK5_ARATH CBL-interacting serine/threonine-protein kinase 5; TrEMBL-Plants: tr|Q53VD9|Q53VD9_LOTJA Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi3g1v0004300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:563257..566369) extracted from Lotus japonicus Gifu genome v1.2.
GATAGCTTCACCAAATAAAACAAACATGCAATTCACAAGAAAGAAAGAAAGAAAACCACTCCACGCCACGTTAATCCAAG TGTTCCGCGTTCTAATTGACCACATTTCACTTAATTTAGGCTTTTCCAGATATTTCCCGCTGTTTGTTTATCTTTTTCTG TTTCTTTCCTTTCTTCTCATGCTATCCATGCTTGGTCAGAGTCAGAGACACCACAGCCCACAGTCATCTTCAAAATCCAT GTGTTTCTCCATGCTTCTTTCCTTTTCCAGTCTCAATCCTATTCAGCATGACGTCTTCCTTCTAATCTAACCCTTTCAAT TATCAATAATTAAATTTTAAACCTTTTCTGAATTTCCTTCCTTCTTATTCTATTTTTTGCCAACACAAGTCAAACAACAA ACAAACAAACCACTAGTTTTATCTATCTATTTATATTTATTTATTTATTCAACACCTCCCAAATTGGCACACACACACAC CAATCCCTAATCAAAACAATCACTATAAAACCTCTTCCTCCATTCTCCACTTTTTCCCATCCCCTTCTCCTCCCCCTCTG CATGCACCATGAAGATCTTCAACCCCTCTATGTGTTTCCTCCAGAATGTTGTGTGTCCCTTCGACACCATCTTCATTAAA ACAACCACCCCTTTGGATCTGGGTCTCACTCTCACCCAATTCCAATTCCATTTCAGAAGCTGCTAGAAAAAATTTAGAAC AACACCACTTGCACATAATTAGACATTCTTTCACACATTCATCATAATCATTACCCTCCCTCCCTCAACCCACCACCAGA AACAAAACAATCAACATGGATCAACGACAACAATCAAGGACGATGAGAGCGGCCAAGAGGAACATATTGTTCAACAAGTA CGAGATTGGCAAGATCCTAGGCCAAGGAAACTTCGCCAAGGTCTACCATGGAAGAAACATGGAGACAAACGAGAGCGTTG CCATCAAGGTTATCAAGAAGGAAAGGCTGAAGAAGGAGAGACTAGTCAAGCAAATCAAGCGTGAAGTTTCCGTGATGCGC CTCGTTCGCCACCCCCACATCGTGGAGCTGAAGGAAGTCATGGCCACCAAGACCAAGATCTTCATGGTGGTTGAATACGT CAAGGGAGGTGAGCTCTTCGCGAAGCTCACCAAAGGGAAGATGACGGAGGTCGCCGCTAGAAAATACTTCCAGCAGCTAA TAAGCGCAGTCGATTTCTGCCATAGTCGCGGCGTCACGCACCGCGACTTGAAGCCGGAGAATCTTCTCCTCGACGACAAC GAGGATCTGAAGGTCTCCGACTTCGGGTTATCGTCGCTGCCCGAGCAGCGACGATCCGACGGGATGCTCCTCACCCCATG CGGAACTCCGGCGTACGTCGCGCCGGAGGTCCTCAAGAAGAAAGGCTACGACGGATCCAAAGCTGATATATGGTCTTGTG GGGTGATCCTCTACGCTCTGCTTTGCGGGTATCTTCCATTTCAGGGTGAGAATGTGATGAGGATTTACAGCAAATCGTTC AAAGCTGATTATGCGATTCCGGAATGGATCTCGCCGGAGGCGAAGAATTTGATCTCGAAACTGCTGGTGGTTGATCCGGA GAAGAGGTATTCCATTGATGAGATAATGAGGGATCCTTGGTTTGAGATCGGGTTCATGAGACCGCTTGCTTTTTCGATGA AAGCGAGCGCGGTGGATGATACTGTGATTGATTTCAACGACGATGTGGTTGAAGATCTTGATCCGAAGAGTGATGTTGGT GGTGGTGAGTTTGTGGAGGCGGCGCGTCCGTCGTACAACGCGTTTGAGATAATCTCGTCGCTGTCGCACGGGTTTGATCT GAGGAATTTGTTTGAGACGAGGAAGAGGTCGCCGTCGACGTTTATCTCGAAACTGTCGGCGTCGGCGGTGGTGGCGAAGC TTGAGGCGGTGGCGAAGAAGCTGAATTTGAGGATCACGGGGAAGAAGGAGTTTATGGTGCGGATGCAGGGGGTGACGGAG GGGAGGAAGGGGAAGGTGGGGATGACGGTGGAGGTATTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCGAAGAA TGCCGGAGACACGCTGGAGTATATAAAGCTGTGTGAGGATCAAGTAAGGCCTTCGTTAAACGACATCGTTTGGTCATGGC AGGGACAGGGTAGTTCGTAGTAGGCTTAGTATCATGCTCTTCCTTCCTGCAATGGCGATTGATTGATTAATTGTATTTAA TTAATCATTAAACACAAAAAAGGAGAGGAAAAAAGTGTATCCTTGTTTTGTTTGTTGTATGTATTATTAATCATTAATCA TTCAGATTTATATTGCCAGATTTTTGCTATGGAATGTTTGGATGTCTCAAGATATTAAGGATTATCTTGTTTAGTTTAGA GGTTGGGAGTCTCATGATTAACCTCTTAACACAAATTACAAAGATGAACATCCCTCCTACATCTACAACACAATGAACAC ATAAAGCAATCTGTCAATCATGCAAGGATCTTCACTTTTAAAATTAAAATCAATGGTTAGGATTGTGGAGGGAGCTAAAG ACAATCTTGTATTATTGATGAAAGTTAATCTTATTGATGAAAGTTGGTGATGGATAAGATTGGAAAGTGAAAAAATTCAC TCAATTAATCCAATCTCTTCCCAAATTGAGGTAAAAGGTGTAGAACCTATTGGGTTATCTTAAAGATCTTCAATGTTAGT TTTTAGAGATGAATTTTTTTTTTTAAGGAAAATACATCTATCAATTAAATGAAACCGCAAATACATCTGCTAAAAGAGCA GAGTTCACCTGTGCAGGGAACTCACTCCACGAACAGGTATCAGGAAAATCATAAGCTAAAGAAGCTAAAACATGAGCAAC ATTATTGCCCCCTCGTTTTACATGAACAATATCAAAGCATTGAAATTGTGAGGCCATCCTCCTACAATGGTTCAACTTCC GCTAGCATGCGCGTCCCTTTGAGAGCTTCAACAACCTCTAATGCATCCATCTTTAGCACCAAGCTATTAATCTCAAGTTG AAGTGCTGCATCCAAAGCCCAGTGTAAAGCCATCACTTCTGCTACTGTGGCACTTGTACGAAAAACATTATAC
CDS sequence (LotjaGi3g1v0004300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAACGACAACAATCAAGGACGATGAGAGCGGCCAAGAGGAACATATTGTTCAACAAGTACGAGATTGGCAAGAT CCTAGGCCAAGGAAACTTCGCCAAGGTCTACCATGGAAGAAACATGGAGACAAACGAGAGCGTTGCCATCAAGGTTATCA AGAAGGAAAGGCTGAAGAAGGAGAGACTAGTCAAGCAAATCAAGCGTGAAGTTTCCGTGATGCGCCTCGTTCGCCACCCC CACATCGTGGAGCTGAAGGAAGTCATGGCCACCAAGACCAAGATCTTCATGGTGGTTGAATACGTCAAGGGAGGTGAGCT CTTCGCGAAGCTCACCAAAGGGAAGATGACGGAGGTCGCCGCTAGAAAATACTTCCAGCAGCTAATAAGCGCAGTCGATT TCTGCCATAGTCGCGGCGTCACGCACCGCGACTTGAAGCCGGAGAATCTTCTCCTCGACGACAACGAGGATCTGAAGGTC TCCGACTTCGGGTTATCGTCGCTGCCCGAGCAGCGACGATCCGACGGGATGCTCCTCACCCCATGCGGAACTCCGGCGTA CGTCGCGCCGGAGGTCCTCAAGAAGAAAGGCTACGACGGATCCAAAGCTGATATATGGTCTTGTGGGGTGATCCTCTACG CTCTGCTTTGCGGGTATCTTCCATTTCAGGGTGAGAATGTGATGAGGATTTACAGCAAATCGTTCAAAGCTGATTATGCG ATTCCGGAATGGATCTCGCCGGAGGCGAAGAATTTGATCTCGAAACTGCTGGTGGTTGATCCGGAGAAGAGGTATTCCAT TGATGAGATAATGAGGGATCCTTGGTTTGAGATCGGGTTCATGAGACCGCTTGCTTTTTCGATGAAAGCGAGCGCGGTGG ATGATACTGTGATTGATTTCAACGACGATGTGGTTGAAGATCTTGATCCGAAGAGTGATGTTGGTGGTGGTGAGTTTGTG GAGGCGGCGCGTCCGTCGTACAACGCGTTTGAGATAATCTCGTCGCTGTCGCACGGGTTTGATCTGAGGAATTTGTTTGA GACGAGGAAGAGGTCGCCGTCGACGTTTATCTCGAAACTGTCGGCGTCGGCGGTGGTGGCGAAGCTTGAGGCGGTGGCGA AGAAGCTGAATTTGAGGATCACGGGGAAGAAGGAGTTTATGGTGCGGATGCAGGGGGTGACGGAGGGGAGGAAGGGGAAG GTGGGGATGACGGTGGAGGTATTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCGAAGAATGCCGGAGACACGCT GGAGTATATAAAGCTGTGTGAGGATCAAGTAAGGCCTTCGTTAAACGACATCGTTTGGTCATGGCAGGGACAGGGTAGTT CGTAG
Protein sequence (LotjaGi3g1v0004300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQRQQSRTMRAAKRNILFNKYEIGKILGQGNFAKVYHGRNMETNESVAIKVIKKERLKKERLVKQIKREVSVMRLVRHP HIVELKEVMATKTKIFMVVEYVKGGELFAKLTKGKMTEVAARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDDNEDLKV SDFGLSSLPEQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVMRIYSKSFKADYA IPEWISPEAKNLISKLLVVDPEKRYSIDEIMRDPWFEIGFMRPLAFSMKASAVDDTVIDFNDDVVEDLDPKSDVGGGEFV EAARPSYNAFEIISSLSHGFDLRNLFETRKRSPSTFISKLSASAVVAKLEAVAKKLNLRITGKKEFMVRMQGVTEGRKGK VGMTVEVFEVAPEVAVVEFSKNAGDTLEYIKLCEDQVRPSLNDIVWSWQGQGSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 202 | 202 | - | – | |
| PANTHER | 11 | 451 | 441 | 3.4E-274 | – | |
| PANTHER | 11 | 451 | 441 | 3.4E-274 | – | |
| Gene3D | 13 | 313 | 301 | 1.0E-105 | – | |
| SUPERFAMILY | 18 | 277 | 260 | 1.17E-93 | ||
| ProSiteProfiles | 22 | 276 | 255 | 53.177 | ||
| SMART | 22 | 276 | 255 | 2.4E-107 | ||
| Pfam | 22 | 276 | 255 | 3.6E-78 | ||
| ProSitePatterns | 28 | 55 | 28 | - | ||
| Coils | 50 | 70 | 21 | - | – | |
| ProSitePatterns | 140 | 152 | 13 | - | ||
| Phobius | 203 | 222 | 20 | - | – | |
| Phobius | 223 | 454 | 232 | - | – | |
| Gene3D | 322 | 447 | 126 | 1.9E-39 | – | |
| ProSiteProfiles | 322 | 347 | 26 | 11.019 | ||
| Pfam | 326 | 381 | 56 | 9.5E-17 | ||
| CDD | 328 | 442 | 115 | 1.06701E-40 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi3g1v0004300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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