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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0005200 |
| Transcript ID | LotjaGi3g1v0005200.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT1G80660.2 H -ATPase 9; Swiss-Prot: sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type; TrEMBL-Plants: tr|I1M5Y0|I1M5Y0_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0005200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:641656..645661) extracted from Lotus japonicus Gifu genome v1.2.
TTTGCTGATAGATATCCAAAATAGCCATAGTAGTCATCAAAGTCTTATCTATGTGTTGTTATTTGTTAGCTAGCTTCTAG TATTTGGATGGTAATGCAGCTTCACTGTAATGTGTATAGTATAGTACTTAATGTTTTAACATGCATATGTTCTGTTTGAA CAATTGACAGGTTCTGAGAGATGGAAGGTGGACTGAGCAGGAGGCTGCTATATTGGTACCTGGAGATATAATCAGTATGA AATTAGGAGATATCGTTCCAGCTGATGCTCGTCTTTTAGAAGGAGATCCCCTCAAGATTGATCAATCTGCACTCACGGGT GAGTCCTTGCCTGTTACTAAGAACTCTGGTGATGAAGTCTTCTCTGGTTCCACAGTAAAACAAGGAGAAATTGAGGCTGT TGTGATAGCTACTGGGGTGCACACCTTCTTTGGTAAAGCTGCACACTTGGTAGATAGCACTAACCAAGTTGGCCATTTCC AAAAGGTACTACTATTATCAGCTATCTCTTTGTTCTTTGAGTTACATACTATTTGTCTCTTCACTAATGTGCATTTTGAT GGTTATGATCAGGTGCTGACAGCTATTGGTAACTTCTGCATTTGCTCAATTGCTGTGGGAATGATCATAGAGCTTGTTGT CATGTACCCAATCCAGCACCGCAAGTATAGGAGTGGAATCAACAATCTCTTGGTGCTCCTCATTGGTGGGATTCCTATTG CCATGCCAACAGTCTTGTCAGTAACAATGGCTATTGGTTCCCACAGGCTGTCCCAGCAAGGTGCAATCACAAAGAGAATG ACAGCCATTGAGGAGATGGCTGGGATGGATGTGTTGTGCAGTGACAAGACTGGCACTCTTACACTGAACAAGCTTACTGT GGACAAGAATTTGGTAGAGGTAAGGGGATCCAAGACAGACAATTCATTAAAAGTTTACTTGTGTTGGAACATCAATTTAA TGTCATTTGTTTTTCAGATTTACTAATCATGGAACCAATTTCTCCACATTGCAGGTTTTTTGCAAAGATGCTGACAAGGA CACAGTAATTCTGCTTGGAGCTAGGGCCTCTAGGGTTGAGAACCAAGATGCTATTGATGCTTGCATTGTTGGAATGTTGG GAGATCCAAAAGAGGTTTGTAATTTCTTCCACATGATTTCTTGTCCTGGTGGTTTCCTACACGAATAAGCCAGATTCTAC ATGCTTGAAATCTTTGAACAAAGAAAAAAAAATTCACATTAATAAAGTTCTCTTGCTAGCCTAGTGAATGACTCTTGGGG TAACCTTGTAAAATATGCTAAGGTGCTTCTTTAGACATGCATATGAAACTTTTGATTACCATGACCATAGGTGATTCACT GATTTGATAAGATTATAACTATAATGACACACTTTTCATGCTTACTACAGGCTAGAGAAGGTATTGAAGAGGTGCATTTC TTACCCTTCAATCCAGTGGACAAGCGTACAGCCATAACATACATAGACCATCTGGGAGATTGGCACCGAGTGAGCAAAGG GGCACCAGAGCAGGTAAATCGATCTTTCAATGCACTACACATAATTGATGTCTCCTGTTTCCTTTAACAATGTAACTCAT ATTGAATTTCTTGCTAGATTATCGAACTCTGCAAGGTTAGAGAAGATGTGAAGAACAAAGCCCTTTCCATTATTGATAAG TTTGCTGATCGCGGTCTTCGTTCGCTTGCTGTTGCCAAACAAGTGAGTTATGGTCCTTAGTAGTAGTACATGCCTACCCC CCAACAAATAATTGCTCATACATGGTTTGAATAAGTTTTGTGACAAACTATACATGCTTTCAGGAAGTGCCAGAAAAGAG CAAGGAGAGTCCAGGAGCACCATGGGTGTTTGTGGGTCTTTTGCCTCTCTTTGACCCACCTAGGCATGACAGTGCAGAAA CCATCCAACGCGCTCTTCACCTAGGAGTGAATGTCAAGATGATTACTGGTGATCAACTAGCTATCGGCAAGGAAACTGGT CGCAGGCTTGGCATGGGAAGTAACATGTACCCTTCATCCTCCCTCCTTGGTGAGCACAAGGATGCGTCTATTGCTGCTCT TCCAATTGATGAGCTTATTGAGAAGGCTGATGGCTTTGCTGGTGTTTTCCCTGGTAAATTACTACTTTCTTACAAACTTG TACTTGAAAATCAATTTTTTTTACTAGAATTATGAAGGCAACAATCATCGAACTCTAGACCACTTAGTCATAGATGCTAT GATATTATGTCATGAACTAACTATCCAAAAAGTTTAAGTAATTAGTTGATCACACATGGATGATTTTATATTTTATTTCT AACATTCTTCACCTTACTAATTGATGTGAGTCTGAATCTTGTCCTTTTGTCCAATCCAGAACATAAATATGAGATTGTTA AGAGGCTTCAGGACAGGAAGCACATATGTGGGATGACTGGGGATGGTGTCAACGATGCTCCAGCCTTGAAAAGAGCAGAT ATTGGAATTGCAGTGGCTGATGCAACCGATGCAGCGCGAGGTGCATCTGATATAGTCCTCACGGAGCCTGGTTTGAGTGT CATTGTGAGCGCAGTGTTGACAAGCAGAGCCATCTTTCAGAGAATGAAGAACTACACCATATATGCTGTTTCCATAACAA TCCGAATCGTGCTAGGCTTTATGCTCCTTGCACTCATCTGGAAGTTTGATTTCTCACCTTTTATGGTTCTGATCATTGCC ATACTAAATGACGGGACGATCATGACAATTTCCAAGGATAGGGTGAAGCCATCTCCTCTTCCGGATTCATGGAAGCTGAA TGAGATCTTTGCCACCGGCATAGTGCTTGGTGCCTACCTTGCTGTTATGACTGTTGTCTTCTTCTGGCTTGCTCATGCAT CTAATTTCTTCTCAGTAAGATGGAGATTTCAAAATCATATATCGGTTGGAACATGATTTCAGACATAACTCACATGCTAA AATGTTGTTTGCAGGACAAATTTGGAGTGAGATCAATCAGGGATAGCCACAATGAGCTCACAGCAGCTATTTACCTTCAA GTGAGTACTGTAAGTCAGGCTCTCATCTTTGTCACACGTTCAAGGAGTTGGTCTTATGTTGAACGTCCGGGCGCCCTTCT CATGGTCGCCTTTCTGGCAGCACAACTGGTGAGTTATGATGACATGAATAGGCAAATGTTAGTTGTTAATAATGTTAGTC AATTAATCACTCATCAGGGTTCGAACCCTGGACCCTTCACCCTTATCCCACTTTCTGATTTAGTCTTGTGTGTCAAACAA ATTACTTATAGTTTGTATTTCTTTTCATGAATAACTTGTTAGGTTGCCACACTCATTGCTGTGTATGCAAACTGGGGCTT TGCTGATATGAAAGGAATTGGATGGGGTTGGGCTGGTGTCATTTGGCTCTACAGCATTGTTTTCTACATCCCCTTGGACA TCCTTAAATTCATCATAAGATATGCATTGAGTGGAAAAGCATGGAGTAACATTACTGAGAACAGGGTAAAATCTCAATCT CAAAATTCTAAATATCACACTGTTAGTGTTATCTACTAAACAGAACCATATGGATGCAAAATATGTGACCATTTTATTTT CTGTGCTGTGATGCAGGTTGCTTTCACCTCAAAGAAGGATTATGGAAAGGGAGAGAGAGAAGCACAATGGGCTGCAGCTC AACGCACACTGCATGGTCTCAACCCTCCTGAAACTGAGACTATGATGAATGAGAAGAACAACTATAGGGAACTTTCTGAA CTTGCAGAACAGGCCAAGAAACGTGCTGAAGTTGCAAGGTATTGTCCGTCCAGAATTTGAGCCGAGCGGAACCACAATGT TCATTGAAATGCTTACTAATTTAAAGGTAAATCCAATCCAATGTGCCTCATTTGGTTTACACTTTGCAGGTTGAGGGAGC TTCACACGCTTAAGGGGCACGTTGAGTCTGTTGTGAAGCTCAAGGGGCTTGACATTGAGACAATTCAGCAGCACTACACT GTTTGA
CDS sequence (LotjaGi3g1v0005200.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATTAGGAGATATCGTTCCAGCTGATGCTCGTCTTTTAGAAGGAGATCCCCTCAAGATTGATCAATCTGCACTCAC GGGTGAGTCCTTGCCTGTTACTAAGAACTCTGGTGATGAAGTCTTCTCTGGTTCCACAGTAAAACAAGGAGAAATTGAGG CTGTTGTGATAGCTACTGGGGTGCACACCTTCTTTGGTAAAGCTGCACACTTGGTAGATAGCACTAACCAAGTTGGCCAT TTCCAAAAGGTGCTGACAGCTATTGGTAACTTCTGCATTTGCTCAATTGCTGTGGGAATGATCATAGAGCTTGTTGTCAT GTACCCAATCCAGCACCGCAAGTATAGGAGTGGAATCAACAATCTCTTGGTGCTCCTCATTGGTGGGATTCCTATTGCCA TGCCAACAGTCTTGTCAGTAACAATGGCTATTGGTTCCCACAGGCTGTCCCAGCAAGGTGCAATCACAAAGAGAATGACA GCCATTGAGGAGATGGCTGGGATGGATGTGTTGTGCAGTGACAAGACTGGCACTCTTACACTGAACAAGCTTACTGTGGA CAAGAATTTGGTAGAGGTTTTTTGCAAAGATGCTGACAAGGACACAGTAATTCTGCTTGGAGCTAGGGCCTCTAGGGTTG AGAACCAAGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGAGATCCAAAAGAGGCTAGAGAAGGTATTGAAGAGGTG CATTTCTTACCCTTCAATCCAGTGGACAAGCGTACAGCCATAACATACATAGACCATCTGGGAGATTGGCACCGAGTGAG CAAAGGGGCACCAGAGCAGATTATCGAACTCTGCAAGGTTAGAGAAGATGTGAAGAACAAAGCCCTTTCCATTATTGATA AGTTTGCTGATCGCGGTCTTCGTTCGCTTGCTGTTGCCAAACAAGAAGTGCCAGAAAAGAGCAAGGAGAGTCCAGGAGCA CCATGGGTGTTTGTGGGTCTTTTGCCTCTCTTTGACCCACCTAGGCATGACAGTGCAGAAACCATCCAACGCGCTCTTCA CCTAGGAGTGAATGTCAAGATGATTACTGGTGATCAACTAGCTATCGGCAAGGAAACTGGTCGCAGGCTTGGCATGGGAA GTAACATGTACCCTTCATCCTCCCTCCTTGGTGAGCACAAGGATGCGTCTATTGCTGCTCTTCCAATTGATGAGCTTATT GAGAAGGCTGATGGCTTTGCTGGTGTTTTCCCTGAACATAAATATGAGATTGTTAAGAGGCTTCAGGACAGGAAGCACAT ATGTGGGATGACTGGGGATGGTGTCAACGATGCTCCAGCCTTGAAAAGAGCAGATATTGGAATTGCAGTGGCTGATGCAA CCGATGCAGCGCGAGGTGCATCTGATATAGTCCTCACGGAGCCTGGTTTGAGTGTCATTGTGAGCGCAGTGTTGACAAGC AGAGCCATCTTTCAGAGAATGAAGAACTACACCATATATGCTGTTTCCATAACAATCCGAATCGTGCTAGGCTTTATGCT CCTTGCACTCATCTGGAAGTTTGATTTCTCACCTTTTATGGTTCTGATCATTGCCATACTAAATGACGGGACGATCATGA CAATTTCCAAGGATAGGGTGAAGCCATCTCCTCTTCCGGATTCATGGAAGCTGAATGAGATCTTTGCCACCGGCATAGTG CTTGGTGCCTACCTTGCTGTTATGACTGTTGTCTTCTTCTGGCTTGCTCATGCATCTAATTTCTTCTCAGACAAATTTGG AGTGAGATCAATCAGGGATAGCCACAATGAGCTCACAGCAGCTATTTACCTTCAAGTGAGTACTGTAAGTCAGGCTCTCA TCTTTGTCACACGTTCAAGGAGTTGGTCTTATGTTGAACGTCCGGGCGCCCTTCTCATGGTCGCCTTTCTGGCAGCACAA CTGGTTGCCACACTCATTGCTGTGTATGCAAACTGGGGCTTTGCTGATATGAAAGGAATTGGATGGGGTTGGGCTGGTGT CATTTGGCTCTACAGCATTGTTTTCTACATCCCCTTGGACATCCTTAAATTCATCATAAGATATGCATTGAGTGGAAAAG CATGGAGTAACATTACTGAGAACAGGGTTGCTTTCACCTCAAAGAAGGATTATGGAAAGGGAGAGAGAGAAGCACAATGG GCTGCAGCTCAACGCACACTGCATGGTCTCAACCCTCCTGAAACTGAGACTATGATGAATGAGAAGAACAACTATAGGGA ACTTTCTGAACTTGCAGAACAGGCCAAGAAACGTGCTGAAGTTGCAAGGTTGAGGGAGCTTCACACGCTTAAGGGGCACG TTGAGTCTGTTGTGAAGCTCAAGGGGCTTGACATTGAGACAATTCAGCAGCACTACACTGTTTGA
Protein sequence (LotjaGi3g1v0005200.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNSGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH FQKVLTAIGNFCICSIAVGMIIELVVMYPIQHRKYRSGINNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMT AIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFCKDADKDTVILLGARASRVENQDAIDACIVGMLGDPKEAREGIEEV HFLPFNPVDKRTAITYIDHLGDWHRVSKGAPEQIIELCKVREDVKNKALSIIDKFADRGLRSLAVAKQEVPEKSKESPGA PWVFVGLLPLFDPPRHDSAETIQRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDASIAALPIDELI EKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTS RAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGIV LGAYLAVMTVVFFWLAHASNFFSDKFGVRSIRDSHNELTAAIYLQVSTVSQALIFVTRSRSWSYVERPGALLMVAFLAAQ LVATLIAVYANWGFADMKGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWSNITENRVAFTSKKDYGKGEREAQW AAAQRTLHGLNPPETETMMNEKNNYRELSELAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 83 | 83 | - | – | |
| PANTHER | 1 | 770 | 770 | 0.0 | – | |
| Pfam | 1 | 151 | 151 | 2.3E-38 | – | |
| Gene3D | 1 | 57 | 57 | 1.4E-12 | – | |
| PANTHER | 1 | 770 | 770 | 0.0 | – | |
| TIGRFAM | 1 | 649 | 649 | 7.0E-288 | ||
| CDD | 2 | 684 | 683 | 0.0 | ||
| SUPERFAMILY | 2 | 72 | 71 | 3.01E-20 | ||
| TIGRFAM | 4 | 201 | 198 | 2.6E-29 | ||
| PRINTS | 22 | 36 | 15 | 2.0E-42 | – | |
| Gene3D | 58 | 194 | 137 | 5.1E-47 | – | |
| SUPERFAMILY | 72 | 690 | 619 | 1.57E-57 | ||
| Phobius | 84 | 110 | 27 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 111 | 121 | 11 | - | – | |
| Phobius | 122 | 144 | 23 | - | – | |
| TMHMM | 122 | 144 | 23 | - | – | |
| Phobius | 145 | 489 | 345 | - | – | |
| SFLD | 154 | 483 | 330 | 0.0 | – | |
| SFLD | 154 | 483 | 330 | 0.0 | – | |
| SUPERFAMILY | 168 | 478 | 311 | 2.39E-37 | ||
| Pfam | 168 | 445 | 278 | 1.7E-15 | – | |
| PRINTS | 172 | 186 | 15 | 2.0E-42 | – | |
| ProSitePatterns | 174 | 180 | 7 | - | ||
| Gene3D | 195 | 338 | 144 | 8.2E-13 | ||
| PRINTS | 288 | 306 | 19 | 2.0E-57 | ||
| PRINTS | 326 | 337 | 12 | 2.0E-42 | – | |
| PRINTS | 348 | 358 | 11 | 2.0E-42 | – | |
| Gene3D | 385 | 689 | 305 | 1.8E-112 | – | |
| PRINTS | 403 | 419 | 17 | 2.0E-57 | ||
| TIGRFAM | 406 | 516 | 111 | 9.3E-28 | ||
| PRINTS | 431 | 450 | 20 | 2.0E-42 | – | |
| PRINTS | 431 | 447 | 17 | 2.0E-57 | ||
| PRINTS | 454 | 466 | 13 | 2.0E-42 | – | |
| PRINTS | 462 | 487 | 26 | 2.0E-57 | ||
| TMHMM | 490 | 512 | 23 | - | – | |
| Phobius | 490 | 512 | 23 | - | – | |
| Phobius | 513 | 517 | 5 | - | – | |
| Phobius | 518 | 535 | 18 | - | – | |
| Phobius | 536 | 554 | 19 | - | – | |
| TMHMM | 554 | 576 | 23 | - | – | |
| Phobius | 555 | 578 | 24 | - | – | |
| Phobius | 579 | 597 | 19 | - | – | |
| Phobius | 598 | 617 | 20 | - | – | |
| PRINTS | 603 | 624 | 22 | 2.0E-57 | ||
| Phobius | 618 | 628 | 11 | - | – | |
| TMHMM | 628 | 650 | 23 | - | – | |
| Phobius | 629 | 650 | 22 | - | – | |
| Phobius | 651 | 661 | 11 | - | – | |
| TMHMM | 660 | 679 | 20 | - | – | |
| Phobius | 662 | 686 | 25 | - | – | |
| Phobius | 687 | 794 | 108 | - | – | |
| Coils | 738 | 765 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of LotjaGi3g1v0005200.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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