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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0005300 |
| Transcript ID | LotjaGi3g1v0005300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G80640.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q0V7T5|Y1864_ARATH Probable receptor-like protein kinase At1g80640; TrEMBL-Plants: tr|I1MCC0|I1MCC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0005300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:657677..659966) extracted from Lotus japonicus Gifu genome v1.2.
GTGGAGATCTTACTAGTCACTACCCTCTTGTTCATAGATTTAGTTTCATGAGTTGTGAACACTCATCAGCATTTTTTAAA TGTATTTTAGTATTGTCTTATGTTGAAACAGGATTTCAGGAGGTTAGAATAGTGCACCACCATAGTTTGAATAAGAGGAT TCTAGTAGCACTAATTGCTTGTTCTGCACTTCTTGGAGGAACCTTCCTATTCTTGCTATATGTCTGGCTCCGTCGACATA AATATGTTCGAAGCTCAAATGGTAAAAGCCTAGGAACCATGGGTATGACTATTTTCTCTCTTGAAACTTTTCTTTTGCTT TTGCACAGAGGTAATGCATTGCAGGCACAGAAAAAAAATCCATTTTTGTCGCTCACTCATTTTACTTATTGAACTTGTAG AGGTTGCAAAAGCGGAAAGTGTAAGCTCTGTTAATGCTAAACTTAATTACTCAAGGATGGCAGATAAGAAGAGTTCAGTA GCTATTTTCGACTTTCAGCTGTTAGAGGCTGCAACAAACAATTTTAGCACAAACAATGTAATGGGAGAGAGTGGCTCTAG AGTTGTTTATAGAGCTCGTTTTGATGAACATTTCCAGGCAGCAGTGAAAAAAGCAGATAGTGATGCTGATAGAGAATTTG AGGTGATAGTCCTTTAGAATTAGTTTTGAATATCAATTTCGTAGGATGTAGTATTTCCGTTTACTGAATTTGCCTTTAGT TACTGCACTAATTGCAGAACGAAGTGAGTTGGTTGAGCAAGATACGGCATCAGAATATCATAAAACTTCTGGGCTATTGT ATTCATGGTGAATCAAGGTTTCTTGTCTATGAATTGATGGAGAATGGATCTCTGGAAACTCAATTACATGGTAAGTTTTT CAGTAATGTTGATTCTGAAAACTGAGAAAAATACTGTTTAGTGGGAACTTAAGCATCATATGTTGTTCATTGGTATAACC AATTGTAGGGCCTAATCATGGATCACCGTTAACTTGGCATCTCCGGTTAAGAATTGCAATTGATGTTGCTCGGTGAGTTT ACGACGCATATTGTTCTAAAAACTAATTTAATATCCCTTGTTTTATGTATAATGAATGATACGTTTCATTTGGTAGAGCA TTAGAATATCTCCATGAGCACTCCAATCCTCCTGTGGTTCATAGAGACCTAAAATCTTCCAATGTTCTTCTGGATTCTAA CTTCAATGCCAAGGTTAGTTCCTTAGTGACCTATTAATCGTACATGTTACTTATGTCTTCACTACCCTTACTGAGTTTTG TGATTCAGCTATCAGATTTTGGACTTGCTATAGCTTCTGGAGTGCAACACAAGAACATGAAGATGTCAGGAACTTTGGGA TATGTGGCACCTGAGTACATATCACATGGTATAATAAAACATTCATTATTATCATTAAAAGACAAAAACATAAACCTTCT TGCCCTGTTTGCTCCTTTCTTGAACAAAGTGGTTGTAGTATTAATCATTTCTTAAAAACATTGCTTCAGTGTACCTTTCA ACCTTATCTATGATGTCAATTGATTTGGGTAGATGACCACCTCAAGTGGTAATGATTTTAGTTATATTTGTTATTGTATA AATTACGAGTTACTTTTATCAGAAAAGGGAGATATTAGTGAATTCTTTTACATTGGTTAAACTTTGAGCTTTAACTAAAA TATGGAACTTGATGTTTTCTTTTCTCCTATTCCTCAAAACAAAATATAACAATAGCTAGTTTTTCAGGTAAACTAACTGA TAAGAGTGATGTCTATGCTTTTGGGGTTCTCCTTCTAGAACTCTTAACAGCAAGAAAACCCATGGAGAACTCGTCCTCAC AACAATATCTATCCCTTGTCTCATGGGTATGTTTTCTTTCATAAGCTTTTCGTTAATGGATAATTGAGATACTGCGTTCT GTTGTACTTGGTGGTTAAAACTTTAAACTTGCAGGCCATGCCTCAACTAACTGACAGAGCAAAGCTTCCGAGTATTCTGG ATCCTGTTATCAGAGACACAATGGATTTGAAACATTTATATCAGGTTCATTGAATAGAGGCTCTGTAATGTAATCTCACA TGTTTTTCCTGGTTTGTGATAAATGCTGAATCTTAAGTTGACATTAACATTTTACAGGTTGCTGCAGTGGCTGTACTCTG TGTCCAACCAGAACCAAGTTATAGGCCATTGATAACAGATGTTCTGCATTCTCTCATCCCTTTGGTGCCTGTTGAGCTTG GAGGGTCACTCAGAGTTACAGAACCAATCAGCTCTGAGAATTCTCACTGA
CDS sequence (LotjaGi3g1v0005300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTGTGAACACTCATCAGCATTTTTTAAATGTATTTTAGTATTGTCTTATGTTGAAACAGGATTTCAGGAGGTTAG AATAGTGCACCACCATAGTTTGAATAAGAGGATTCTAGTAGCACTAATTGCTTGTTCTGCACTTCTTGGAGGAACCTTCC TATTCTTGCTATATGTCTGGCTCCGTCGACATAAATATGTTCGAAGCTCAAATGAGTTACTTATTGAACTTGTAGAGGTT GCAAAAGCGGAAAGTGTAAGCTCTGTTAATGCTAAACTTAATTACTCAAGGATGGCAGATAAGAAGAGTTCAGTAGCTAT TTTCGACTTTCAGCTGTTAGAGGCTGCAACAAACAATTTTAGCACAAACAATGTAATGGGAGAGAGTGGCTCTAGAGTTG TTTATAGAGCTCGTTTTGATGAACATTTCCAGGCAGCAGTGAAAAAAGCAGATAGTGATGCTGATAGAGAATTTGAGAAC GAAGTGAGTTGGTTGAGCAAGATACGGCATCAGAATATCATAAAACTTCTGGGCTATTGTATTCATGGTGAATCAAGGTT TCTTGTCTATGAATTGATGGAGAATGGATCTCTGGAAACTCAATTACATGGGCCTAATCATGGATCACCGTTAACTTGGC ATCTCCGGTTAAGAATTGCAATTGATGTTGCTCGAGCATTAGAATATCTCCATGAGCACTCCAATCCTCCTGTGGTTCAT AGAGACCTAAAATCTTCCAATGTTCTTCTGGATTCTAACTTCAATGCCAAGCTATCAGATTTTGGACTTGCTATAGCTTC TGGAGTGCAACACAAGAACATGAAGATGTCAGGAACTTTGGGATATGTGGCACCTGAGTACATATCACATGGTAAACTAA CTGATAAGAGTGATGTCTATGCTTTTGGGGTTCTCCTTCTAGAACTCTTAACAGCAAGAAAACCCATGGAGAACTCGTCC TCACAACAATATCTATCCCTTGTCTCATGGGCCATGCCTCAACTAACTGACAGAGCAAAGCTTCCGAGTATTCTGGATCC TGTTATCAGAGACACAATGGATTTGAAACATTTATATCAGGTTGCTGCAGTGGCTGTACTCTGTGTCCAACCAGAACCAA GTTATAGGCCATTGATAACAGATGTTCTGCATTCTCTCATCCCTTTGGTGCCTGTTGAGCTTGGAGGGTCACTCAGAGTT ACAGAACCAATCAGCTCTGAGAATTCTCACTGA
Protein sequence (LotjaGi3g1v0005300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSCEHSSAFFKCILVLSYVETGFQEVRIVHHHSLNKRILVALIACSALLGGTFLFLLYVWLRRHKYVRSSNELLIELVEV AKAESVSSVNAKLNYSRMADKKSSVAIFDFQLLEAATNNFSTNNVMGESGSRVVYRARFDEHFQAAVKKADSDADREFEN EVSWLSKIRHQNIIKLLGYCIHGESRFLVYELMENGSLETQLHGPNHGSPLTWHLRLRIAIDVARALEYLHEHSNPPVVH RDLKSSNVLLDSNFNAKLSDFGLAIASGVQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVLLLELLTARKPMENSS SQQYLSLVSWAMPQLTDRAKLPSILDPVIRDTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGSLRV TEPISSENSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | - | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 38 | 61 | 24 | - | – | |
| PANTHER | 59 | 400 | 342 | 8.1E-151 | – | |
| PANTHER | 59 | 400 | 342 | 8.1E-151 | – | |
| Phobius | 62 | 410 | 349 | - | – | |
| Gene3D | 80 | 192 | 113 | 4.0E-27 | – | |
| SUPERFAMILY | 97 | 386 | 290 | 2.29E-76 | ||
| SMART | 120 | 387 | 268 | 4.2E-33 | ||
| ProSiteProfiles | 120 | 387 | 268 | 35.99 | ||
| Pfam | 132 | 346 | 215 | 7.3E-44 | ||
| Gene3D | 193 | 391 | 199 | 1.8E-58 | – | |
| ProSitePatterns | 238 | 250 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0005300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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