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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0008300 |
Transcript ID | LotjaGi3g1v0008300.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase family protein; TAIR: AT1G52540.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|I3SL22|I3SL22_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0008300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:934056..936611) extracted from Lotus japonicus Gifu genome v1.2.
TTGTGCTTTTTTGATAGATGGTTGATGATAGTGTCTCTATTAATGCAGCAAAGGGAGAGGGAAGAAGCAACCCGCATGGA GGGTGTTTTCTTTGAAAGAATTGCACTCTGCTACAAATAATTTCAACTATGATAACAAGCTTGGTGAAGGTGGATTCGGC AGTGTATACTGGGGCCAGCTTTGGGATGGATCACAAGTAGGAATATACTTTATTTTCTGCTCTTTGTTGCATGTTATCAA ATCAGCTTTTGTTTATGGTTATTCTTGATCATTCTAAGCTGAATTGTTTCGGTATGGTTAATTTGCTTAGTTTTACACAA TATGTGTCCCAGATATTGGCCCCATTTGGAAGAGCTTATTTGAGCTTATCTGATAGCATAAGCTCTTATGCCAGTGTTTG AGAGAGCTTATGCAAACAGCTTATGGCCTACCATAAGCTGTTTTGAGCTTATTTTCATAAGCTACTCAAGATAGCTTATG AAAAAGAGCTGATGCCTATATATGCTTATTTTCGATTTATTTCAATAAATATTTTAAAATAGCTTATGAATAAGCACTTA TGTCATAAGCGCTTATGATCATAAGCGCTTAATTAAGCTGTGTTTCCATACGGGGCCATTATGGCCATTTGGTATCTTAG GCATCTGGCGGTATACATCTCAAAAGTTTTCCTTTAGCTTTCTCAATTTTAGTTGACCCTTAGTCTATGATGATTTTATC ATGTAACACTGAAAAGGGTCAGATTGTGAGGGTGGAACTAATTCAAATGAAATAAATGAATGTAAGCACCCAACCCAGGA CTGCTACTGCAGTAAATGGTCTTGAAATTTTACATGATCAGGCTCATCACGAGCAGGAAATGAAGAATTGGGTTTGGACT TTTTATGATCTTATAGGAATTTCATTACCTTGGTAAACGCCCAACTTGAAGGACTAAAATGGAAGGGAAGGAAAATCATG TAAGGTTGATTATGGGTGTAATTTTGTGATGTGGAGCCGTGTATGAATAAGAAAGACAGCAATAGATGGGGGTTGATCTC CTCCCTATTTTTTTTACCAATCAAATATTGAGTAGCAGGCAAAAATACCCTAAATCTGGCATCTCCACTGGCTTCTTTTT TTTCTATTTCACCAATCCTTCAATGTAAGTACGAAAGATCTCTTTCAATGATTTGTGAGTGAACTTCCAACAACTTGATG CCTTGGCTGCCTTATTAGTTAACAGTAACCAGTTTTTTTAAACTTATTTCATTCAGTTCTGCTATCGGGCTAGGATGATT ATTGCTTGAAGGAAAAACGTGATTAAGTTCCTTAATGAATGACTCTGACTTGTGAGTTTTGATTTGACCTTAAAATGTGA TTTCTAAAACACTTAATCAGAAGTTTCAGGTGCTTATGCTTCAAAATCCTCTCATAAAAACATTTTACCTGCTGCCTGTG AAACCAACCTCTTTAAAATATGCTGATGGCCAAAATAGTAGTGTTAACTGTGTAACCTTTTTCTGAGATCTCTTCTTGTT GGCTGCTTGCAACTCTATGTATTTTCATCTGTGTATGCATGTAGATTGCAGTGAAAAGATTGAAAGTCTGGAGCAACAAA GCGGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTTCGTGGCTATTG TGCTGAAGGTCAGGAACGGTTGATCGTATATGACTATATGCCGAACTTGAGCCTACTCTCTCATCTTCATGGACAGCACT CATCAGAATGCCTTCTTGATTGGAATCGACGGATGAATATTGCAATAGGGTCTGCCGAGGGAATTGTGTGAGTACTAAGG ACTAAACTTGCTTTCTTCATTAACTTATGCCTCTGTCTTTTTAGTAATACTAAGATTTAATGCTTTTCAGATATCTTCAC CACCAAGCAACACCACATATCATCCACAGAGATATTAAAGCAAGCAATGTGTTATTGGATTCAGACTTCCAGGCTCGGGT TGCTGATTTTGGTTTCGCCAAGTTGATCCCTGATGGTGCAACTCATGTGACCACAAGAGTCAAGGGCACCCTTGGCTACC TTGCACCAGAATATGCCATGTTAGGTAAAGCTAATGAGTGTTGTGATGTGTTCAGTTTCGGAATCCTCCTTCTAGAACTC GCTAGTGGCAAAAAACCACTTGAAAAACTCAGTTCCACAGTGAAGCGTTCAATAAACGATTGGGCCCTGCCATTGGCTTG TGCGAAGAAATTTACTGAATTTGCAGATCCAAGGCTTAATGGCGAGTATGTGGAGGAAGAGCTTAAAAGAATTGTTTTAG TTGCTCTGATATGTGCTCAGAGTCAACCTGACAAGAGACCCACCATGATTGAGGTGGTAGAGCTTCTGAAGGGAGAGTCC AAAGATAAGCTTTCTCAGTTGGAGAACCATGAACTCTTTAAGAACCCTCCAGGTGTAGGACATGATGATGGGACTTCAGC TGCTGAAGGTAGTTCAGACTTCATCTCTGAGGAGAAGGAATCAAAACATGAGTTGGAAGAGAGTACAGAACCATGA
CDS sequence (LotjaGi3g1v0008300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTTCGTGGCTATTGTGCTGA AGGTCAGGAACGGTTGATCGTATATGACTATATGCCGAACTTGAGCCTACTCTCTCATCTTCATGGACAGCACTCATCAG AATGCCTTCTTGATTGGAATCGACGGATGAATATTGCAATAGGGTCTGCCGAGGGAATTGTATATCTTCACCACCAAGCA ACACCACATATCATCCACAGAGATATTAAAGCAAGCAATGTGTTATTGGATTCAGACTTCCAGGCTCGGGTTGCTGATTT TGGTTTCGCCAAGTTGATCCCTGATGGTGCAACTCATGTGACCACAAGAGTCAAGGGCACCCTTGGCTACCTTGCACCAG AATATGCCATGTTAGGTAAAGCTAATGAGTGTTGTGATGTGTTCAGTTTCGGAATCCTCCTTCTAGAACTCGCTAGTGGC AAAAAACCACTTGAAAAACTCAGTTCCACAGTGAAGCGTTCAATAAACGATTGGGCCCTGCCATTGGCTTGTGCGAAGAA ATTTACTGAATTTGCAGATCCAAGGCTTAATGGCGAGTATGTGGAGGAAGAGCTTAAAAGAATTGTTTTAGTTGCTCTGA TATGTGCTCAGAGTCAACCTGACAAGAGACCCACCATGATTGAGGTGGTAGAGCTTCTGAAGGGAGAGTCCAAAGATAAG CTTTCTCAGTTGGAGAACCATGAACTCTTTAAGAACCCTCCAGGTGTAGGACATGATGATGGGACTTCAGCTGCTGAAGG TAGTTCAGACTTCATCTCTGAGGAGAAGGAATCAAAACATGAGTTGGAAGAGAGTACAGAACCATGA
Protein sequence (LotjaGi3g1v0008300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSSECLLDWNRRMNIAIGSAEGIVYLHHQA TPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANECCDVFSFGILLLELASG KKPLEKLSSTVKRSINDWALPLACAKKFTEFADPRLNGEYVEEELKRIVLVALICAQSQPDKRPTMIEVVELLKGESKDK LSQLENHELFKNPPGVGHDDGTSAAEGSSDFISEEKESKHELEESTEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 38 | 38 | 1.2E-11 | – | |
SMART | 1 | 233 | 233 | 1.4E-11 | ||
PIRSF | 1 | 251 | 251 | 4.9E-29 | – | |
ProSiteProfiles | 1 | 250 | 250 | 31.538 | ||
SUPERFAMILY | 2 | 233 | 232 | 3.83E-64 | ||
PANTHER | 2 | 275 | 274 | 6.0E-121 | – | |
PANTHER | 2 | 275 | 274 | 6.0E-121 | – | |
Pfam | 2 | 233 | 232 | 5.3E-35 | ||
CDD | 2 | 235 | 234 | 1.88288E-91 | – | |
Gene3D | 39 | 252 | 214 | 3.8E-59 | – | |
ProSitePatterns | 84 | 96 | 13 | - | ||
MobiDBLite | 248 | 288 | 41 | - | – | |
MobiDBLite | 270 | 288 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0008300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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