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LotjaGi3g1v0008300.3

Overview

Field Value
Gene ID LotjaGi3g1v0008300
Transcript ID LotjaGi3g1v0008300.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT1G52540.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|I3SL22|I3SL22_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0008300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:934056..936677) extracted from Lotus japonicus Gifu genome v1.2.

TTTTCATTGATGATATACTTGAAGGTGTTTTGAAGTAGAGGTTTTAGGTTTAAAGTCTTGTCTTGCTTGTGCTTTTTTGA TAGATGGTTGATGATAGTGTCTCTATTAATGCAGCAAAGGGAGAGGGAAGAAGCAACCCGCATGGAGGGTGTTTTCTTTG AAAGAATTGCACTCTGCTACAAATAATTTCAACTATGATAACAAGCTTGGTGAAGGTGGATTCGGCAGTGTATACTGGGG CCAGCTTTGGGATGGATCACAAGTAGGAATATACTTTATTTTCTGCTCTTTGTTGCATGTTATCAAATCAGCTTTTGTTT ATGGTTATTCTTGATCATTCTAAGCTGAATTGTTTCGGTATGGTTAATTTGCTTAGTTTTACACAATATGTGTCCCAGAT ATTGGCCCCATTTGGAAGAGCTTATTTGAGCTTATCTGATAGCATAAGCTCTTATGCCAGTGTTTGAGAGAGCTTATGCA AACAGCTTATGGCCTACCATAAGCTGTTTTGAGCTTATTTTCATAAGCTACTCAAGATAGCTTATGAAAAAGAGCTGATG CCTATATATGCTTATTTTCGATTTATTTCAATAAATATTTTAAAATAGCTTATGAATAAGCACTTATGTCATAAGCGCTT ATGATCATAAGCGCTTAATTAAGCTGTGTTTCCATACGGGGCCATTATGGCCATTTGGTATCTTAGGCATCTGGCGGTAT ACATCTCAAAAGTTTTCCTTTAGCTTTCTCAATTTTAGTTGACCCTTAGTCTATGATGATTTTATCATGTAACACTGAAA AGGGTCAGATTGTGAGGGTGGAACTAATTCAAATGAAATAAATGAATGTAAGCACCCAACCCAGGACTGCTACTGCAGTA AATGGTCTTGAAATTTTACATGATCAGGCTCATCACGAGCAGGAAATGAAGAATTGGGTTTGGACTTTTTATGATCTTAT AGGAATTTCATTACCTTGGTAAACGCCCAACTTGAAGGACTAAAATGGAAGGGAAGGAAAATCATGTAAGGTTGATTATG GGTGTAATTTTGTGATGTGGAGCCGTGTATGAATAAGAAAGACAGCAATAGATGGGGGTTGATCTCCTCCCTATTTTTTT TACCAATCAAATATTGAGTAGCAGGCAAAAATACCCTAAATCTGGCATCTCCACTGGCTTCTTTTTTTTCTATTTCACCA ATCCTTCAATGTAAGTACGAAAGATCTCTTTCAATGATTTGTGAGTGAACTTCCAACAACTTGATGCCTTGGCTGCCTTA TTAGTTAACAGTAACCAGTTTTTTTAAACTTATTTCATTCAGTTCTGCTATCGGGCTAGGATGATTATTGCTTGAAGGAA AAACGTGATTAAGTTCCTTAATGAATGACTCTGACTTGTGAGTTTTGATTTGACCTTAAAATGTGATTTCTAAAACACTT AATCAGAAGTTTCAGGTGCTTATGCTTCAAAATCCTCTCATAAAAACATTTTACCTGCTGCCTGTGAAACCAACCTCTTT AAAATATGCTGATGGCCAAAATAGTAGTGTTAACTGTGTAACCTTTTTCTGAGATCTCTTCTTGTTGGCTGCTTGCAACT CTATGTATTTTCATCTGTGTATGCATGTAGATTGCAGTGAAAAGATTGAAAGTCTGGAGCAACAAAGCGGACATGGAATT TGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTTCGTGGCTATTGTGCTGAAGGTCAGG AACGGTTGATCGTATATGACTATATGCCGAACTTGAGCCTACTCTCTCATCTTCATGGACAGCACTCATCAGAATGCCTT CTTGATTGGAATCGACGGATGAATATTGCAATAGGGTCTGCCGAGGGAATTGTGTGAGTACTAAGGACTAAACTTGCTTT CTTCATTAACTTATGCCTCTGTCTTTTTAGTAATACTAAGATTTAATGCTTTTCAGATATCTTCACCACCAAGCAACACC ACATATCATCCACAGAGATATTAAAGCAAGCAATGTGTTATTGGATTCAGACTTCCAGGCTCGGGTTGCTGATTTTGGTT TCGCCAAGTTGATCCCTGATGGTGCAACTCATGTGACCACAAGAGTCAAGGGCACCCTTGGCTACCTTGCACCAGAATAT GCCATGTTAGGTAAAGCTAATGAGTGTTGTGATGTGTTCAGTTTCGGAATCCTCCTTCTAGAACTCGCTAGTGGCAAAAA ACCACTTGAAAAACTCAGTTCCACAGTGAAGCGTTCAATAAACGATTGGGCCCTGCCATTGGCTTGTGCGAAGAAATTTA CTGAATTTGCAGATCCAAGGCTTAATGGCGAGTATGTGGAGGAAGAGCTTAAAAGAATTGTTTTAGTTGCTCTGATATGT GCTCAGAGTCAACCTGACAAGAGACCCACCATGATTGAGGTGGTAGAGCTTCTGAAGGGAGAGTCCAAAGATAAGCTTTC TCAGTTGGAGAACCATGAACTCTTTAAGAACCCTCCAGGTGTAGGACATGATGATGGGACTTCAGCTGCTGAAGGTAGTT CAGACTTCATCTCTGAGGAGAAGGAATCAAAACATGAGTTGGAAGAGAGTACAGAACCATGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0008300.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTTCGTGGCTATTGTGCTGA AGGTCAGGAACGGTTGATCGTATATGACTATATGCCGAACTTGAGCCTACTCTCTCATCTTCATGGACAGCACTCATCAG AATGCCTTCTTGATTGGAATCGACGGATGAATATTGCAATAGGGTCTGCCGAGGGAATTGTATATCTTCACCACCAAGCA ACACCACATATCATCCACAGAGATATTAAAGCAAGCAATGTGTTATTGGATTCAGACTTCCAGGCTCGGGTTGCTGATTT TGGTTTCGCCAAGTTGATCCCTGATGGTGCAACTCATGTGACCACAAGAGTCAAGGGCACCCTTGGCTACCTTGCACCAG AATATGCCATGTTAGGTAAAGCTAATGAGTGTTGTGATGTGTTCAGTTTCGGAATCCTCCTTCTAGAACTCGCTAGTGGC AAAAAACCACTTGAAAAACTCAGTTCCACAGTGAAGCGTTCAATAAACGATTGGGCCCTGCCATTGGCTTGTGCGAAGAA ATTTACTGAATTTGCAGATCCAAGGCTTAATGGCGAGTATGTGGAGGAAGAGCTTAAAAGAATTGTTTTAGTTGCTCTGA TATGTGCTCAGAGTCAACCTGACAAGAGACCCACCATGATTGAGGTGGTAGAGCTTCTGAAGGGAGAGTCCAAAGATAAG CTTTCTCAGTTGGAGAACCATGAACTCTTTAAGAACCCTCCAGGTGTAGGACATGATGATGGGACTTCAGCTGCTGAAGG TAGTTCAGACTTCATCTCTGAGGAGAAGGAATCAAAACATGAGTTGGAAGAGAGTACAGAACCATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0008300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSSECLLDWNRRMNIAIGSAEGIVYLHHQA TPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANECCDVFSFGILLLELASG KKPLEKLSSTVKRSINDWALPLACAKKFTEFADPRLNGEYVEEELKRIVLVALICAQSQPDKRPTMIEVVELLKGESKDK LSQLENHELFKNPPGVGHDDGTSAAEGSSDFISEEKESKHELEESTEP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
1 38 38 1.2E-11 –
SMART
SM00220
1 233 233 1.4E-11
IPR000719
PIRSF
PIRSF000654
1 251 251 4.9E-29 –
ProSiteProfiles
PS50011
1 250 250 31.538
IPR000719
SUPERFAMILY
SSF56112
2 233 232 3.83E-64
IPR011009
PANTHER
PTHR27001
2 275 274 6.0E-121 –
PANTHER
PTHR27001:SF774
2 275 274 6.0E-121 –
Pfam
PF07714
2 233 232 5.3E-35
IPR001245
CDD
cd14066
2 235 234 1.88288E-91 –
Gene3D
G3DSA:1.10.510.10
39 252 214 3.8E-59 –
ProSitePatterns
PS00108
84 96 13 -
IPR008271
MobiDBLite
mobidb-lite
248 288 41 - –
MobiDBLite
mobidb-lite
270 288 19 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0008300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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