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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0020200 |
| Transcript ID | LotjaGi3g1v0020200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT1G10340.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680; TrEMBL-Plants: tr|I1MCT7|I1MCT7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0020200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2084408..2087327) extracted from Lotus japonicus Gifu genome v1.2.
TCTAGATAATAAACATTGAAAAGTCTATACTCTCTATAGTCTATATGTTCCTCATCGATCCCTACTACAAAGTTTCATTT TCCTCAAAGTTGAGTACTATTGCTAAGGTGCTTCAACCCAGGAATATGGATCCAAAGTTTTTTGAAGCAATAAGGAAAAA TGACATAACCACATTTTCAAGCTTAGTTAAAGGGAATGAAGAAATACTTAATCAGAAAACGGAAGATTCATTCAGCACTC CATTACACCTTGCTTCCAAGTATGGTTGCACTGAAATGGTGTCTGAGATTCTCAGGTTGTGCCCTGACATGGTTTTTGCT GAGAATAAACAACTCAAGACTCCAATTCATGAGGCTTGCCAACAAGAGAATGTCAAGGTCTTAATGTTGCTGTTGGAGGC CAATCCAACAGCTGCTTGTAAGCTGAACTCATCTTGTAAAAGTGCTTTTTTGGTGGCTTGCAGCCATGGTCATCTAGACA TGGTGAATCTCCTGCTGAATCTATCTGAGATGGTGGGGCTAGAAGTAGCAGGCTTTGATGAAACTTGTATCCATATTGCT ATATCAAGAGGGCACACAGGTAGGCATGAGAGTTTTCTGCAAGTTTTTGTAAATTGTATTTAGCGCATATTTGGATCAGC GTAGTCACAATTGATTATGGATAAAATTGATTACAGTAAAAGTAAGCTGATTTATATTTGTTTACATTTATGAAAATGGT GATTTGTTTTGTAAAATGGTTAGCACAGAAGCTGCTCTCTCTAACTTTGATTTTGCGACTGAAATTAATTCTCCAACATA ACTTCCAAATATATATATTGTCATTCAAAAGTGATTTTACTCGATAAGAATTGATTCTGAGGATTCATTGGGGAACTAAT TTTAGCTAGAATCACCTTTGCATTGATTTCAACTTTCAAGTCAAACTTCTGACTCTTTTGAATCATGTAATATTAATCAC TTAACAATAAGAAGGGGGTGGATTAGAAAATTCAAATAGTTGATGATCTAAGGAAACTCCTAAACTATTGATTGTTTGTG CAGATGTTGTGAGAGAGTTGTTGAATAAGTGGCCAGGGCTTAATCAAGTGATTGACGACAATGGAAATTCACTATTGCAT CATGCTTGTAATAAAGGGCACAAGGAGATTGCATGGATCCTACTAAGACGTGATCCAAATCTTGCTTTACAATACAACAA CAATGGTTACACACCACTGCACCTGGCAGTGATGAATGGGAAAGTCTCAATCCTTGAGGACTTTGTGTCAAGCTGTGCTG CATCATTTCACTATCTCACAAGAGAAGAAGAGACAATATTTCACTTAGCTGTGAGGTACGGATGCTATGATGCATTTGTA TTCTTGGTGCAAGTTTCCAATGGTACCAATCTATTGCATTGTCAAGATAGATTTGGCAATAGTGCTCTACACCTTGCAGT TATAGGTGGCCGCCATAAGGTGAGAAATTACTCAGAGTTTTCATTATGTTTAATTACCATGAGAAATCTCAACATTTACT CTTTTGAAATCAAGAAAAATGTAAGAAAACAAGAAATAAATTGAGACTTCAGTGCTTTCCCTCCTTCAATATCATTCAAT AGTTAATTCTTTGTTGAAATATTGTTCAGACTACTACCATGAAAAAGAACTTACCTTAATTAATATACCTAAATCAAAAT AACAGCCTATTTGTTTTGAATGTAAAACTATACACATCTGTAGTTGTGCTAAATTGTTTTATGATCATTGTAGATAGCAG AGTTCTTGATCATCAAGACAAAGCTAGATATTAATACTCGGAACAGTGAAGGGATCGCAGCACTTGACATCCTTGACCAG GCTATGGACAGTGCAGAAAATAGGCAATTACAAGCCACTTTTATCCGAGCTGGAGGTAAAAGAAGCTTCAACCAATCTTC ATCTTTTTCACTGGAAATAGAAAAGTCCAATTCGCATTCACCAGCAGCGTCTAGGCTTTCTTTGTCAAGGAGGTTTATGG CTAACGAAGTGGAAGTGCTGAATGACATGGTTTCTTATGATTGTACAAGCCCTCCTAAAGTTAGCAAAAGCACAGACCCT AGATCACCTCAGCCTCAAGTAAGTGAGACATTAGAGAATGGAGCCTATACACCATATTACTTCTCCCCAACAATTTTAGG GAAACACAAGCATCACAGCAAAAGAAAAGTGGAAAATCTAAATCAACATTACTATACTCAGAGGAATAAGTACCATCATG AAATGCACAAAGAGGCATTACTGAATGCTAGGAACACAGTTGTATTAGTTGCTGTTTTGATTGCAACTGTCACTTTTGCC GCCGGTATTAGTCCCCCTGGTGGTGTGTACCAAGACGGACCGATGAAAGGGAAGTCAATGGTGGGTAAAACAACAGCTTT CAAGGTCTTTGCAATAAGCAACAACGTAGCACTTTTCACCTCTTTGTCTGTAGTTATTGTTCTTGTTAGTATCATTCCCT TTAGGAGAAAACCACAGACAATACTACTAATGATGGCTCACAAGGTCATGTGGGTAGCTGTGGCATTTATGGCAACCAGC TACGTTGCTGCCACATGGGTGATCTTGCCACATAGTCAAGAGATGCAATGGCTTTCTGTTGTGCTGATAGCATTAGGTGG TGGCTCTTTGGGAACAATATTCATTGGTCTTAGTGTGATGCTGGTTGAGCACTGGCTGAGGAAATCCAAGTGGAGAAAGA CAGGGAAGGAAGGCCTTGATGGAGATGCAAACTCAGAAAAGGAAAGTAAAAATTCAGATTTTGAGAGCTCTTATTTGCAG GGTTATCATTCATACTGATTAATTTGGCTCCCTAAGTGAAAATATTATGTTATGTGTAAGGAGAATGTACATTAATACCA CTTCTACAAGAATGATATAAAAGTATGAGTATTGTTTGGT
CDS sequence (LotjaGi3g1v0020200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCTCATCGATCCCTACTACAAAGTTTCATTTTCCTCAAAGTTGAGTACTATTGCTAAGGTGCTTCAACCCAGGAA TATGGATCCAAAGTTTTTTGAAGCAATAAGGAAAAATGACATAACCACATTTTCAAGCTTAGTTAAAGGGAATGAAGAAA TACTTAATCAGAAAACGGAAGATTCATTCAGCACTCCATTACACCTTGCTTCCAAGTATGGTTGCACTGAAATGGTGTCT GAGATTCTCAGGTTGTGCCCTGACATGGTTTTTGCTGAGAATAAACAACTCAAGACTCCAATTCATGAGGCTTGCCAACA AGAGAATGTCAAGGTCTTAATGTTGCTGTTGGAGGCCAATCCAACAGCTGCTTGTAAGCTGAACTCATCTTGTAAAAGTG CTTTTTTGGTGGCTTGCAGCCATGGTCATCTAGACATGGTGAATCTCCTGCTGAATCTATCTGAGATGGTGGGGCTAGAA GTAGCAGGCTTTGATGAAACTTGTATCCATATTGCTATATCAAGAGGGCACACAGATGTTGTGAGAGAGTTGTTGAATAA GTGGCCAGGGCTTAATCAAGTGATTGACGACAATGGAAATTCACTATTGCATCATGCTTGTAATAAAGGGCACAAGGAGA TTGCATGGATCCTACTAAGACGTGATCCAAATCTTGCTTTACAATACAACAACAATGGTTACACACCACTGCACCTGGCA GTGATGAATGGGAAAGTCTCAATCCTTGAGGACTTTGTGTCAAGCTGTGCTGCATCATTTCACTATCTCACAAGAGAAGA AGAGACAATATTTCACTTAGCTGTGAGGTACGGATGCTATGATGCATTTGTATTCTTGGTGCAAGTTTCCAATGGTACCA ATCTATTGCATTGTCAAGATAGATTTGGCAATAGTGCTCTACACCTTGCAGTTATAGGTGGCCGCCATAAGATAGCAGAG TTCTTGATCATCAAGACAAAGCTAGATATTAATACTCGGAACAGTGAAGGGATCGCAGCACTTGACATCCTTGACCAGGC TATGGACAGTGCAGAAAATAGGCAATTACAAGCCACTTTTATCCGAGCTGGAGGTAAAAGAAGCTTCAACCAATCTTCAT CTTTTTCACTGGAAATAGAAAAGTCCAATTCGCATTCACCAGCAGCGTCTAGGCTTTCTTTGTCAAGGAGGTTTATGGCT AACGAAGTGGAAGTGCTGAATGACATGGTTTCTTATGATTGTACAAGCCCTCCTAAAGTTAGCAAAAGCACAGACCCTAG ATCACCTCAGCCTCAAGTAAGTGAGACATTAGAGAATGGAGCCTATACACCATATTACTTCTCCCCAACAATTTTAGGGA AACACAAGCATCACAGCAAAAGAAAAGTGGAAAATCTAAATCAACATTACTATACTCAGAGGAATAAGTACCATCATGAA ATGCACAAAGAGGCATTACTGAATGCTAGGAACACAGTTGTATTAGTTGCTGTTTTGATTGCAACTGTCACTTTTGCCGC CGGTATTAGTCCCCCTGGTGGTGTGTACCAAGACGGACCGATGAAAGGGAAGTCAATGGTGGGTAAAACAACAGCTTTCA AGGTCTTTGCAATAAGCAACAACGTAGCACTTTTCACCTCTTTGTCTGTAGTTATTGTTCTTGTTAGTATCATTCCCTTT AGGAGAAAACCACAGACAATACTACTAATGATGGCTCACAAGGTCATGTGGGTAGCTGTGGCATTTATGGCAACCAGCTA CGTTGCTGCCACATGGGTGATCTTGCCACATAGTCAAGAGATGCAATGGCTTTCTGTTGTGCTGATAGCATTAGGTGGTG GCTCTTTGGGAACAATATTCATTGGTCTTAGTGTGATGCTGGTTGAGCACTGGCTGAGGAAATCCAAGTGGAGAAAGACA GGGAAGGAAGGCCTTGATGGAGATGCAAACTCAGAAAAGGAAAGTAAAAATTCAGATTTTGAGAGCTCTTATTTGCAGGG TTATCATTCATACTGA
Protein sequence (LotjaGi3g1v0020200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLIDPYYKVSFSSKLSTIAKVLQPRNMDPKFFEAIRKNDITTFSSLVKGNEEILNQKTEDSFSTPLHLASKYGCTEMVS EILRLCPDMVFAENKQLKTPIHEACQQENVKVLMLLLEANPTAACKLNSSCKSAFLVACSHGHLDMVNLLLNLSEMVGLE VAGFDETCIHIAISRGHTDVVRELLNKWPGLNQVIDDNGNSLLHHACNKGHKEIAWILLRRDPNLALQYNNNGYTPLHLA VMNGKVSILEDFVSSCAASFHYLTREEETIFHLAVRYGCYDAFVFLVQVSNGTNLLHCQDRFGNSALHLAVIGGRHKIAE FLIIKTKLDINTRNSEGIAALDILDQAMDSAENRQLQATFIRAGGKRSFNQSSSFSLEIEKSNSHSPAASRLSLSRRFMA NEVEVLNDMVSYDCTSPPKVSKSTDPRSPQPQVSETLENGAYTPYYFSPTILGKHKHHSKRKVENLNQHYYTQRNKYHHE MHKEALLNARNTVVLVAVLIATVTFAAGISPPGGVYQDGPMKGKSMVGKTTAFKVFAISNNVALFTSLSVVIVLVSIIPF RRKPQTILLMMAHKVMWVAVAFMATSYVAATWVILPHSQEMQWLSVVLIALGGGSLGTIFIGLSVMLVEHWLRKSKWRKT GKEGLDGDANSEKESKNSDFESSYLQGYHSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 491 | 491 | - | – | |
| Gene3D | 18 | 382 | 365 | 7.2E-60 | ||
| SUPERFAMILY | 32 | 152 | 121 | 2.57E-16 | ||
| Pfam | 35 | 121 | 87 | 2.8E-7 | ||
| PANTHER | 37 | 634 | 598 | 1.1E-235 | – | |
| PANTHER | 37 | 634 | 598 | 1.1E-235 | – | |
| ProSiteProfiles | 62 | 341 | 280 | 44.325 | ||
| SMART | 62 | 91 | 30 | 1.2 | ||
| SMART | 96 | 125 | 30 | 1.7 | ||
| SMART | 130 | 159 | 30 | 7.9 | ||
| SUPERFAMILY | 131 | 343 | 213 | 5.38E-39 | ||
| Pfam | 137 | 224 | 88 | 7.8E-15 | ||
| SMART | 164 | 193 | 30 | 0.25 | ||
| ProSiteProfiles | 198 | 230 | 33 | 9.057 | ||
| SMART | 198 | 227 | 30 | 0.0019 | ||
| ProSiteProfiles | 232 | 254 | 23 | 9.324 | ||
| SMART | 232 | 262 | 31 | 0.0037 | ||
| Pfam | 237 | 334 | 98 | 2.4E-10 | ||
| SMART | 266 | 295 | 30 | 160.0 | ||
| SMART | 302 | 332 | 31 | 0.088 | ||
| MobiDBLite | 416 | 435 | 20 | - | – | |
| Pfam | 484 | 593 | 110 | 2.1E-29 | ||
| Phobius | 492 | 511 | 20 | - | – | |
| TMHMM | 493 | 515 | 23 | - | – | |
| Phobius | 512 | 530 | 19 | - | – | |
| Phobius | 531 | 555 | 25 | - | – | |
| TMHMM | 535 | 557 | 23 | - | – | |
| Phobius | 556 | 574 | 19 | - | – | |
| Phobius | 575 | 595 | 21 | - | – | |
| TMHMM | 577 | 596 | 20 | - | – | |
| Phobius | 596 | 600 | 5 | - | – | |
| Phobius | 601 | 628 | 28 | - | – | |
| TMHMM | 606 | 628 | 23 | - | – | |
| Phobius | 629 | 671 | 43 | - | – | |
| MobiDBLite | 641 | 659 | 19 | - | – | |
| MobiDBLite | 641 | 671 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0020200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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