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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0028300 |
| Transcript ID | LotjaGi3g1v0028300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09918|LOX3_PEA Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7IS30|G7IS30_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0028300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3094538..3099686) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAAGCATGCACGCACTCCATAAGTATTATTGAGTTTTAACAGTTTCTTCATTCGAAACTATGCATGCACGTATGACA CATTGCACATTGGAGTCAGTGATCCATTCCATTCAAGACACACAATACTTGCTTGAGTTGCTTCATATCTCATCAATCTT CCATCATCGTTATAAGTAGCAGCATTCTGCACTCCGCATACTCACACTTCACTCACCATTTCTGTTCTGAAATTAATCAC AAGTTATAGCGAAGATGTTTTCGGGGGTGCATGGGATGCTGAATAGGGGGCAGAAGATAAAAGGGACGGTGGTGCTGATG CGGAAGAATGTGTTGGATATAAACAGCCTCACCAGTGTTGGTGGAGTCATCGGTTCAGGCCTCGACATCCTTGGTTCCAC AGTTGATAATCTCACTGCTTTCTTAGGCCGATCTGTCTCTCTCCAGTTGATTAGTTCCACCAAAGCTGATGGTATATATA TCTATCTATGCTTAATCAATTCCTTTCTTCCTTCTAATTTATTGATTTCACTCACTTAATCTCTTCGCAAAGGATTAATA AGGTCTTAATTAATGAGTATACTCTTCACTTAGTAATTCTTTAATTAAAGGTCATTTTAACTAATGTTTAAACACCATCA CTCAAAATTTCAAGTCAATTTAATTAATCTTTACCACCTCTTAATGGAAAGTGTGTGAGAACAATTAATCTTTACCACCT ATCATTTTTTAGCTTTTTCTGAAACTTGCTTTTTAGCCTGGCTAAATGAAATTTGATTATTTAGCCATTATAAAACGGCT TCACTGATTTCAAGTTTCACTTTTACTTGTTACCTTTAATTTTTCTTTGTAGCAAATGGGAAAGGGAAACTTGGAAAGGA AACTTTTCTTGAAGGAGTCATCACTTCGTTGCCAACCTTGGGAGCAGGCCAATCTGCATTCAAAATTCACTTTGAATGGG ATGATGACTTTGGAATTCCTGGAGCATTTTACATCAAGAATTTCATGCAAACTGAGTTTTTCCTTGTGAGTTTGATTCTT GAAGACATTCCAAACCATGGAACCATCTACTTTGTTTGCAACTCCTGGATTTACAATGCTAAACACTTCAAAAATGACCG AATTTTCTTTGCCAACACGGTAAGAAACTTATATACTCCCTCTCATCCGTTCCTTAATATCTGTCAGCTTAAGAGATTTT GTTACGTGTATTAAGAAATAGTTTTAATATTCTTGTTTCTATCAAAATTACTACCTAACTTCTTGAGTTTTTTAAGTTGT AAAAGTGACTGATAAGTAAGAACAAGAAAGAGATCAAAATAATGATAGATATATAGCACCAGAGAGGGAGTAGTTCATAA TTTTTCTTAAAATTTGTTGTAATTTAGTTTCTATACAATCAGCTGTGAGGAAAATTCTTTGAGGAATTGTGAAGAAAATT AACAAATTATATGTTGCAGCCATATCTTCCAAGTGAAACACCAGCTCCATTGGCTCAGTACAGAGAAGAAGAGTTGAAGA ATTTGAGAGGAGATGGAACTGGTGAACGTAAAGAATGGGAAAGGATCTATGATTATGATGTCTACAATGATTTGGGGGAT CCAGATAAAGGTGAAAAGCATACCCGTCCAGTTCTTGGAGGGTCTGAGACCCATCCTTATCCTCGCAGGTGTAGAACTGG CAGAAAACCATCGAAGAAAGGTGAAGCTTCTATTTCCATTTTTAAGCTATTCTATCACAATTCAAGGAAACAAATCTGTT TTTCAATTCAAGTGGTCCTAATCCCCTGAAGTAAGCTCTCAAGTTCGAACTATTATGATATGAGTGTTCCTAGTAAGCTC TCAAGAAACCTTGTTTTCTTGGCTTACAAGGTTACTGTGAATATTTGAATTGGTGGCTATGTATGTTGGGTGAATTTATA TAATGATGAAGTATTTTGAAAAATTATTTTGTTGAACTTCAATACTTTCTCTGTTATGGTTTTGAAAATTTCTGTTATTG TTGCTAATAAATTTTGCTATGATGTTATTAAACAGATCCTAATAGTGAGAGCAGGACCAGTGATATTTATCTTCCAAGAG ATGAAGCTTTTGGTCACTTGAAGTCATCTGACTTTCTAGTTTATGGATTGAAGTCTGTGTCTCAAGATGTTGTCCCGGCA CTACAATCTGTATTTTTTGACTTAAATTTCACGCCGAATGAGTTTGATAGCTTTGATGAAGTTCATGGACTCTATGATGG TGGAATTAAGCTGCCTACAAATGTACTTAGTAAGATTAGTCCATTACCTGTGCTCAAGGAAGTCTTTCGAACCGATGGTG AACAAGCCCTCAAGTTTCCACCGCCTAAAGTAGTTCAAGGTATCTCATATATAATAGCATATTTGGATCAACTTATTTTT CCTCAAAATTAATTCTGGCACCTAGAAGCTACTCAGAGAAGCTCATCCCAGAATTGATTTTGGCTTCAAAATACCAATTG TAGAAATAGTTCCAAACATGCACAAAGTTAAAAGTACTTGTACCTAAAATATCCCATTCAAGTGACATAGTCCTCTTATT TAAGACCTAACAATAAGGTAATTAAGCTTATGGATCTTGTGAATTAGTCTTATTTGGCAATGGCTATTTGTTGTTACTTG AGCAGCAACTAAGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTCGCCGGTGTAAATCCAAATGTGATTC GTTGTCTTAAGGTAAGCCTAATTAAGAGTTTCTCATAAGAAATTACACAAAACTGAGGTTGCATTTTCTTGGCATGTTAA GTTTGATTGATGGCATATTGAACGATATATTGTTTATCAAAGTTCCTAATAATTATCCTGGATTTTTTGATGTTGCAGGT GTTCCCTCCACCAAGCAAGCTAGACAGTCAAGTCTACGGTGATCATACCAGTAAAATAACCAAAGAACACCTGGAGCCTA ACTTAGAAGGCCTCACTGTAGATCAGGTATATAACAGATAAAATTGTGTTTCACAAAAAAAAATTCACTGGTTGAATTCT GTTTCAATTGTTGACTTCATTTTAGATGTTCCAATGAATAAGTTTTATTTGGTTTGAAAGGCAATTCAAAAAGAGAGATT GTTCATATTGGATCATCATGACTCAATCATGCCATACTTAAGGCGCATAAACTCAACTTCCACAAAGGCTTATGCTACCA GAACCATCCTTTTCTTAAAAGATGATGGAACTTTAAAGCCACTGGTCATAGAGTTGAGTTTGCCACATCCTGACGGAGAT CATCATGGTGCTGTTAGTGATATTTACCTGCCTGCAAAAGAAGGTGTTGAAAGTTCTCAGTGGCTACTGGCCAAGGCATA TGTGATAGTGAATGACTCATGCTACCATCAACTTGTCAGCCATTGGTATAATATAAATCATGTCAATTAAATAACATTAG AATAGTTCTTTCTGTAGAATATCTATAAATTGATTATTAACATCTCTTCATGGATGACAGGTTAAATACTCATGCAGTTA TTGAGCCATTCGTCATTGCAACTCACAGACATCTTAGCTTTGTTCACCCTATATATAAGCTTCTGTATCCTCACTATCGT GACACCATGAATATAAATTCCCTTGCTCGAGGATCACTGGTCAACGACGGTGGTATCATAGAACAAACATTTTTGTGGGG GCGGTACTCTATGGAAATGTCCTCTGTACTTTACAAGAATTGGGTTTTTATAGAGCAATCACTGCCTGCTGATCTCATAA AAAGGTAATTCTTATTTCTTACAAACATAAACCAGTAAAAAAGTCATAAGTCCAAATTTATACATATACTGAAGTCATAA ACTTGAATGCATTTTTATGTTAATTACTGTTTGTAACTCTGCCTATGCTGTGTCATAGCCGGTCCTAAGCCTGATAAAGG AGGAAAGTAGTGTGAGGCCTGCGGCAGCCAGCATAAAATTGGCATTAATCTTTAATATGTATCAAGTGATCCATATAGCC AACCTCACTTAGTGGAATAAGGCTTTTGTTTAGGTTTATGGTTCATGTTTGATTTGTATTTTGTAAATTTTGATTTAGAG GAATGGCATATGCGGATTCAGCTTCACCTCATGGCGTTCAACTTGTGATAGAGGACTACCCTTATGCAGTTGATGGACTG GAGATATGGGATGCTATCTGGATATGGGTCAAAGACTACGTCTCCTTGTACTACCCCTCTGATGAAAAACTTCAACAAGA TTCTGAACTCCAAGCTTGGTGGAAAGAAATTGTAGAAGTGGGTCATGGTGACAAGAAAGATGGAAAATGGCCTACAATGC AAGCTTGTCATGAACTGATTGAAGCTTGCACTATCATCATATGGATTGCTTCAGCTCTTCATGCAGCTGTTAACTTTGGC CAGTATCCTTATGGCGGTTTAGTCTTGAACCGCCCGACTCTTAGCCGGCGGTTCATGCCGAAGAAAGGAACTCCTGAGTA TGATGAGCTGGTCAAGAGCCCTCAGAAGGCTTACTTGAAGACAATCACTCCAAAGTTTCAGACCCTTATTGACCTTTCTG TTATAGAAATCTTGTCAAGACATGCTTCTGATGAGTTGTACCTTGGGGAGAGAGACAATCCAAATTGGACATCTGATTCA AGTGCATTAGAGGCCTTTAAGAAGTTTGGGAACAAGCTTGCTGAAATTGAGAAAAAACTCTCTCAGAGAAACAATGATGA GAAGCTGAGAAACCGTCGTGGACCGGTTCAGATGCCTTATACCCTGCTTTATCCTTCTAGTGATGAAGGATTAACCTTCA GAGGAATTCCCAACAGCATCTCTATCTGAAGAAGTCTATGGTTACTTAAGTTATGTTTCTATGAATAAAAGATGCAGAAT AAGAAGGAATCCAAATTCCTTCATCCACTGCCTTAGTTTATCGTGTGTGTTTGAGTGCTTTCATCTTAGGAAATAAATAA AAGCACTTTTGTTGTATAATGTTATGAAATAATAAAAGCAGTGATGTTACCATGTAACATGGTCTGTGCATGAATTGAAT AAAACAATTTGTTTACTAGTGTTTGCCCCCCATATCCGTTCACCCAACATCTCAAATATGGAAAATACTGATTGCAAAAT CTTACATTACATTTCTGCGACAATTTCAG
CDS sequence (LotjaGi3g1v0028300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTCGGGGGTGCATGGGATGCTGAATAGGGGGCAGAAGATAAAAGGGACGGTGGTGCTGATGCGGAAGAATGTGTT GGATATAAACAGCCTCACCAGTGTTGGTGGAGTCATCGGTTCAGGCCTCGACATCCTTGGTTCCACAGTTGATAATCTCA CTGCTTTCTTAGGCCGATCTGTCTCTCTCCAGTTGATTAGTTCCACCAAAGCTGATGCAAATGGGAAAGGGAAACTTGGA AAGGAAACTTTTCTTGAAGGAGTCATCACTTCGTTGCCAACCTTGGGAGCAGGCCAATCTGCATTCAAAATTCACTTTGA ATGGGATGATGACTTTGGAATTCCTGGAGCATTTTACATCAAGAATTTCATGCAAACTGAGTTTTTCCTTGTGAGTTTGA TTCTTGAAGACATTCCAAACCATGGAACCATCTACTTTGTTTGCAACTCCTGGATTTACAATGCTAAACACTTCAAAAAT GACCGAATTTTCTTTGCCAACACGCCATATCTTCCAAGTGAAACACCAGCTCCATTGGCTCAGTACAGAGAAGAAGAGTT GAAGAATTTGAGAGGAGATGGAACTGGTGAACGTAAAGAATGGGAAAGGATCTATGATTATGATGTCTACAATGATTTGG GGGATCCAGATAAAGGTGAAAAGCATACCCGTCCAGTTCTTGGAGGGTCTGAGACCCATCCTTATCCTCGCAGGTGTAGA ACTGGCAGAAAACCATCGAAGAAAGATCCTAATAGTGAGAGCAGGACCAGTGATATTTATCTTCCAAGAGATGAAGCTTT TGGTCACTTGAAGTCATCTGACTTTCTAGTTTATGGATTGAAGTCTGTGTCTCAAGATGTTGTCCCGGCACTACAATCTG TATTTTTTGACTTAAATTTCACGCCGAATGAGTTTGATAGCTTTGATGAAGTTCATGGACTCTATGATGGTGGAATTAAG CTGCCTACAAATGTACTTAGTAAGATTAGTCCATTACCTGTGCTCAAGGAAGTCTTTCGAACCGATGGTGAACAAGCCCT CAAGTTTCCACCGCCTAAAGTAGTTCAAGCAACTAAGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTCG CCGGTGTAAATCCAAATGTGATTCGTTGTCTTAAGGTGTTCCCTCCACCAAGCAAGCTAGACAGTCAAGTCTACGGTGAT CATACCAGTAAAATAACCAAAGAACACCTGGAGCCTAACTTAGAAGGCCTCACTGTAGATCAGGCAATTCAAAAAGAGAG ATTGTTCATATTGGATCATCATGACTCAATCATGCCATACTTAAGGCGCATAAACTCAACTTCCACAAAGGCTTATGCTA CCAGAACCATCCTTTTCTTAAAAGATGATGGAACTTTAAAGCCACTGGTCATAGAGTTGAGTTTGCCACATCCTGACGGA GATCATCATGGTGCTGTTAGTGATATTTACCTGCCTGCAAAAGAAGGTGTTGAAAGTTCTCAGTGGCTACTGGCCAAGGC ATATGTGATAGTGAATGACTCATGCTACCATCAACTTGTCAGCCATTGGTTAAATACTCATGCAGTTATTGAGCCATTCG TCATTGCAACTCACAGACATCTTAGCTTTGTTCACCCTATATATAAGCTTCTGTATCCTCACTATCGTGACACCATGAAT ATAAATTCCCTTGCTCGAGGATCACTGGTCAACGACGGTGGTATCATAGAACAAACATTTTTGTGGGGGCGGTACTCTAT GGAAATGTCCTCTGTACTTTACAAGAATTGGGTTTTTATAGAGCAATCACTGCCTGCTGATCTCATAAAAAGAGGAATGG CATATGCGGATTCAGCTTCACCTCATGGCGTTCAACTTGTGATAGAGGACTACCCTTATGCAGTTGATGGACTGGAGATA TGGGATGCTATCTGGATATGGGTCAAAGACTACGTCTCCTTGTACTACCCCTCTGATGAAAAACTTCAACAAGATTCTGA ACTCCAAGCTTGGTGGAAAGAAATTGTAGAAGTGGGTCATGGTGACAAGAAAGATGGAAAATGGCCTACAATGCAAGCTT GTCATGAACTGATTGAAGCTTGCACTATCATCATATGGATTGCTTCAGCTCTTCATGCAGCTGTTAACTTTGGCCAGTAT CCTTATGGCGGTTTAGTCTTGAACCGCCCGACTCTTAGCCGGCGGTTCATGCCGAAGAAAGGAACTCCTGAGTATGATGA GCTGGTCAAGAGCCCTCAGAAGGCTTACTTGAAGACAATCACTCCAAAGTTTCAGACCCTTATTGACCTTTCTGTTATAG AAATCTTGTCAAGACATGCTTCTGATGAGTTGTACCTTGGGGAGAGAGACAATCCAAATTGGACATCTGATTCAAGTGCA TTAGAGGCCTTTAAGAAGTTTGGGAACAAGCTTGCTGAAATTGAGAAAAAACTCTCTCAGAGAAACAATGATGAGAAGCT GAGAAACCGTCGTGGACCGGTTCAGATGCCTTATACCCTGCTTTATCCTTCTAGTGATGAAGGATTAACCTTCAGAGGAA TTCCCAACAGCATCTCTATCTGA
Protein sequence (LotjaGi3g1v0028300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSGVHGMLNRGQKIKGTVVLMRKNVLDINSLTSVGGVIGSGLDILGSTVDNLTAFLGRSVSLQLISSTKADANGKGKLG KETFLEGVITSLPTLGAGQSAFKIHFEWDDDFGIPGAFYIKNFMQTEFFLVSLILEDIPNHGTIYFVCNSWIYNAKHFKN DRIFFANTPYLPSETPAPLAQYREEELKNLRGDGTGERKEWERIYDYDVYNDLGDPDKGEKHTRPVLGGSETHPYPRRCR TGRKPSKKDPNSESRTSDIYLPRDEAFGHLKSSDFLVYGLKSVSQDVVPALQSVFFDLNFTPNEFDSFDEVHGLYDGGIK LPTNVLSKISPLPVLKEVFRTDGEQALKFPPPKVVQATKSAWMTDEEFAREMLAGVNPNVIRCLKVFPPPSKLDSQVYGD HTSKITKEHLEPNLEGLTVDQAIQKERLFILDHHDSIMPYLRRINSTSTKAYATRTILFLKDDGTLKPLVIELSLPHPDG DHHGAVSDIYLPAKEGVESSQWLLAKAYVIVNDSCYHQLVSHWLNTHAVIEPFVIATHRHLSFVHPIYKLLYPHYRDTMN INSLARGSLVNDGGIIEQTFLWGRYSMEMSSVLYKNWVFIEQSLPADLIKRGMAYADSASPHGVQLVIEDYPYAVDGLEI WDAIWIWVKDYVSLYYPSDEKLQQDSELQAWWKEIVEVGHGDKKDGKWPTMQACHELIEACTIIIWIASALHAAVNFGQY PYGGLVLNRPTLSRRFMPKKGTPEYDELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNPNWTSDSSA LEAFKKFGNKLAEIEKKLSQRNNDEKLRNRRGPVQMPYTLLYPSSDEGLTFRGIPNSISI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 860 | 860 | 0.0 | – | |
| PANTHER | 1 | 860 | 860 | 0.0 | ||
| Gene3D | 5 | 170 | 166 | 3.4E-72 | – | |
| SUPERFAMILY | 12 | 170 | 159 | 2.21E-61 | ||
| SMART | 13 | 167 | 155 | 1.3E-66 | ||
| CDD | 14 | 167 | 154 | 1.49854E-53 | ||
| ProSiteProfiles | 41 | 166 | 126 | 21.365 | ||
| Pfam | 68 | 165 | 98 | 1.5E-15 | ||
| PRINTS | 136 | 154 | 19 | 9.9E-96 | ||
| PRINTS | 162 | 183 | 22 | 9.9E-96 | ||
| ProSiteProfiles | 169 | 860 | 692 | 318.082 | ||
| Gene3D | 171 | 270 | 100 | 5.5E-47 | – | |
| SUPERFAMILY | 171 | 860 | 690 | 1.15E-285 | ||
| Pfam | 179 | 843 | 665 | 0.0 | ||
| PRINTS | 201 | 217 | 17 | 9.9E-96 | ||
| MobiDBLite | 215 | 260 | 46 | - | – | |
| PRINTS | 234 | 253 | 20 | 9.9E-96 | ||
| MobiDBLite | 245 | 260 | 16 | - | – | |
| Gene3D | 271 | 359 | 89 | 4.7E-36 | ||
| PRINTS | 302 | 323 | 22 | 9.9E-96 | ||
| PRINTS | 347 | 363 | 17 | 9.9E-96 | ||
| Gene3D | 360 | 494 | 135 | 5.4E-60 | – | |
| PRINTS | 386 | 405 | 20 | 9.9E-96 | ||
| PRINTS | 452 | 476 | 25 | 9.9E-96 | ||
| Gene3D | 495 | 859 | 365 | 1.4E-167 | – | |
| PRINTS | 499 | 516 | 18 | 4.4E-24 | ||
| ProSitePatterns | 517 | 531 | 15 | - | ||
| PRINTS | 517 | 534 | 18 | 4.4E-24 | ||
| PRINTS | 537 | 557 | 21 | 4.4E-24 | ||
| ProSitePatterns | 544 | 554 | 11 | - | ||
| PRINTS | 773 | 787 | 15 | 9.9E-96 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0028300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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