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IPR042057 is a Plant lipoxygenase, PLAT/LH2 domain.
<p>This is the PLAT/LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators [[cite:PUB00092418], [cite:PUB00092419], [cite:PUB00092420]]. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins [[cite:PUB00018111]].</p> <p>Lipoxygenases can be classified as 9- and 13-lipoxygenases, according to the position of oxygen incorporation in linoleic acid and linolenic acid, the most important substrates for LOX catalysis in plants. There are six A. thaliana lipoxygenases identified: AtLOX1-6, among which AtLOX-1 and AtLOX-5 are 9S-lipoxygenases, and AtLOX-2, AtLOX-3, AtLOX-4 and AtLOX-6 are 13S-lipoxygenases [[cite:PUB00092509]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5; TrEMBL-Plants: tr|I1JRC2|I1JRC2_SOYBN Lipoxygenase; Found in the gene: LotjaGi1g1v0772900 | 30 | ||
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09918|LOX3_PEA Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7IS30|G7IS30_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0028300 | 30 | ||
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P14856|LOX2_PEA Seed linoleate 9S-lipoxygenase-2; TrEMBL-Plants: tr|G7IS29|G7IS29_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0028600 | 30 | ||
| – | Lipoxygenase; TAIR: AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|Q93YA9|Q93YA9_SESRO Lipoxygenase; Found in the gene: LotjaGi3g1v0413600 | 30 | ||
| – | Lipoxygenase; TAIR: AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|Q93YA9|Q93YA9_SESRO Lipoxygenase; Found in the gene: LotjaGi3g1v0413600 | 30 | ||
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|O24470|O24470_PEA Lipoxygenase; Found in the gene: LotjaGi3g1v0419600 | 29 | ||
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|G7LIZ7|G7LIZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420000 | 30 | ||
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09918|LOX3_PEA Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7LI99|G7LI99_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420500 | 30 | ||
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09186|LOX3_SOYBN Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7LI99|G7LI99_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420800 | 30 | ||
| – | Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMH0|A0A151TMH0_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496800 | 29 | ||
| – | Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMJ6|A0A151TMJ6_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496900 | 31 | ||
| – | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5; TrEMBL-Plants: tr|V7BGT3|V7BGT3_PHAVU Lipoxygenase; Found in the gene: LotjaGi5g1v0221100 | 30 | ||
| – | Lipoxygenase; TAIR: AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic; TrEMBL-Plants: tr|G7ID71|G7ID71_MEDTR Lipoxygenase; Found in the gene: LotjaGi5g1v0314800 | 29 | ||
| – | Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A072VA97|A0A072VA97_MEDTR Linoleate 13S-lipoxygenase 2-1, related protein; Found in the gene: LotjaGi6g1v0195200 | 30 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.14 |