Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0042300 |
| Transcript ID | LotjaGi3g1v0042300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TPR repeat thioredoxin TTL1-like protein; TAIR: AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1; Swiss-Prot: sp|Q9MAH1|TTL1_ARATH TPR repeat-containing thioredoxin TTL1; TrEMBL-Plants: tr|V7AK33|V7AK33_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0042300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4523489..4527575) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATATAGAGAGAGAAAGAAAGAAAGAAAAGAAAAGAGAGAGAAAACCTGTCTCATGAAACAGCAGGTGAAGAAGAAA AGAAAACCTTCTCTCTTCTTCTTCTTCTTCTTCTTCTCCTCTCTCTCTGTGATTTTCACTGCACACACCGATTTTCTCTC TCTACAAACTCTCTCTCTCTCTCTAGAAACTCTCTCTCTCTCTCTCTTCCTCAACAACACTCACATTCATTCTTTGCTTC TTCCTTTTGCTTCACGAGATCCTTCACCTTTTCTTCTTCACTGCTTCTTCTTCTTCTGTGCTTGTGTTTTCTGTGTTTTC TAGTTTCATTCACTGACATTGCAATTTGCAGTTGAATATACACACAGAGGGTGAGAGAGAGTGTGTGAGAGATAAGGTTT TTTTTCTTCTGGTTATGGAGGAGAAACTGGCACATTCTGGGAGACCCATGAACGAGTTAGGGCTGAGTGAGCGGTTACGC GACTCACCGAGTTGCGGTGGTGATGATGGGAACAAGCCAGATTTCCGAGAACTCGATCTGGGTTCACCCATTTCGCCGTT ACCGGGGCGACACCACCGACAGAGTGCGGCGGCGGCGACGACTACAAGTACTAGTACCACCACTAGTAGTGGTTCGTCTG GGGCGGGTTCTTGCCGGAGTGGGCATAATCTGGTTACGAGGAGATCCGATTCCGGTGAGCTTTCTGTGCAGAATAGTCCG ACCCGGAGTGTGAAACCGGGTCACCGGAGATCCGATTCGTGTTCGTCGCAGCCGTTGATATACTCAGGGCAGAGTCAGAG ATCTCCTTCCTCGTCTTCGTCGTCGTCCGGTGCTGCCGCTGTTAATTCGCCGCCGGTGAATGTTCTTCCGGCTGGGAACA TATGTCCCTCCGGCAGGGTTCTCAAGCCTGCCATGGTGGTGAACCGGAGCTCGAGGCCGGATGTTTTGGGCACAGGGACA GGGAATTACGGGCATGGGAGTATAATGCGGGGCGGTAGAGGCGTCGGTGGTGGTGGTGGTGGCAGCACTGGCGGTGAGGC TGGGAGGTTGAGCGGTGGAAGCGATTCGGTGAAGAGGGTTGAGGCGGAAGAGGTTAAGAGAGCAGGGAATGAGGAGTACA GGAGGGGGCGGTTTGTGGAGGCGTTGCGCCTGTATGATCGGGCAATTGCATTGTCTCCGGGCAATGTGGCTTACCGGAGC AACAGGGCGGCGGCGTTGAGTGCTTTAGGACGGTTGTCGGATGCGGTAACGACGTGTGAGGAGGCTTTGGGGTTGGATCC TAATTATGGAAGGGCTCATCAGCGCTTGGCAACTATCTTTCTTAGGTGAATTAAGTGCTAAAAATTACATGACACTGTTT GATTTATGTAGCTGACTTTACATACTTTGAAGGCTTCCTTGTTGTTGTTATTGAATTGAATTAGTTAATAGGAATTGAGT TGAAAATTGGAATACATGTTTCTTCTATATTTGGATTCGATAATGGCAATGCTAGTTACCATTTTGTGAGGTTTGATGCT TTTTGTTGTATATATGGTGTGTAGTATTGTTTGCTGATATGAAAATGAAGTGGGAAAGTGTTTATGTCACAGGTTAGGAC ATGTTGAGAATGCTAGGAAGCACCTTTGTTATCATGGGCTGCAGCCAGATCCTTCGGAGTTGCAGAAGTTGCAAATGGCG GAAAAGCATATTAAGAAATGTGTTGATGTCCGGAGGATAAGAGATTGGAGAAGTGTTATGAAGGAAGTTGATGCTGCTAT TGCTGCTGGCGTGGACTCTTGTGCAGAGGTATTTGTGTTTTTAACTTTTTGATCATATGAGTTGAGCATGATATGGAGGT GCGGTTGATGTATACAGGCGTCTTAACTTGTTGAAATTTGAATTTACAGCTCTTAATGTGTAGAGCAGAAGCCCTTCTGA AGCTTCACCAGATTGACGATGCCGAATCATGTTTATCACAGATTTCCAAATGTGGACCGCGTCCTACTTCCTCATCCGAG GCAAGGTTTTTTGGGATGCTCTCTGAAGCTTATTGCTTCTTTGTTAGATCTCAGATTGAGATGGCCCTTGGAAGGTGAGT TAAGCTTCATCAGAAATCTAAGCTGGCAAAGGTTACTGTTGTGGAGTGAGAATGGATACTGGATGTGTTGCAGGTTTGAG AATGCAGTTACGGCAGCTGAGAAAGCTAGTCAGATGGATCCCCGGAATATTGAAGTTGCTGTTTTGCTCAACAATGTAAG GATGGTGGCACGAGCTCGATTGCGCGGCAATGATCTCTTTAAATCAGAAAGGTTCACTGAGGCATGCTTGGCATACGGGG AAGGTCTGAGACTGGACCCTTCAAATTCTGTTCTCTATTGCAATAGAGCAGCATGCTGGTTTAAGCTAGGGCAATGGGAA AAATCAATTGAAGATTCCAATCAAGCCTTAAACATTCAACCAAATTATATGAAAGCCACTCTTCGAAGGGCAGCCTCAAA TAGTAAGGTAAATCGAATTCTTATTCTTTGTGATACAGTATATTATCATGCTCAAAGGTAATTGGTGTCATCTCTTGCTT TATTGTGCACAGCTAGAAAGGTGGGCAGAAGCAGTTAAGGATTATGAGCTCTTGAGGAGACGACTACCAGATGACAAAGA AGTTGCTGAAGCTCTATTTCATGCGCAAGTTGCATTAAAGAAATCTCGTGGAGAAGAAGTACATAATTTAAAATTCGGCG GTGAAGTGGAGGACGTATCAGGTCTTGAGCAGTTTAGAGCTGCAATCGCTTTACCAGGTAATTAGAATGGATACATGAAG GTTTCTGCTACTCATTTAACAGCTCGGTTATTTGGCAAATCTCATGTTATCTCTGATTTTACAGGTGTTTCTGTTGTCCA TTTTCAAACGACGTCTAACCAAGAATGCAAGCAAATATCGCCTTTTCTGGATACACTTTGTGCTCGCTATCCATCTATTA ACTTCCTTAAGGTAGCTATCTCACTTCATACATTTGGTTCTAGACTTGTCTCCGCAATACTTAATTTTAGGATTAAGCAA AGCATTATGGTAGAATTCTTATGCATGCAATTTTGTGTTTGATCAAAGGTGGATATTCAAGAAAGCCCGACAATTGCTAC TGCTGAGAATATTAGGATTGTACCAACCTTCAAGATATACAAAAATGGCAGTCGAGTGAAGGAAATTATATGCCCTACTC GTGATATGCTGGAACATTCTGTTAGGCACTACAGCTTGTAAAACTCTGGAATCTCACTGCTTTTCAAGTGTCTACTGCAC TTCTATATTGCTGCCAAACCCACAGTAAAGCCCTCCATAGTTCAACCAGTTTTGTGACCCACCATAAAATGATCTCCTGA TACCTGTGACATAGTCAGACATAATAATCTTGTTAGCAGCCAGCACCAGTGGAACCCGGGCCGGAGATACTCTAGTTCCT TATGCAGTTATTTATTCATTCATCCCTTATTGCCCTCCGGGTTCCATGTTCCTCCAACTTTCCTTTATCAATAATCATTT CTCCTCCTATCCTTCAGTTCTTGTAGGCCAGCTGTTCTAGCATCCCCAGCTTCTTTGTAGTTAAGGAAAAACGTGGAGAA TTTATGTATGTACAATTGATTAAGCTGTCAGTTTATATATTACCTTGAAGATAGATAGAAAACAGAAGAAAGAGGAGGTT GGTTTGCTACAAAGATCTGTACATGTATATTTGTGATGATGATTATATATACAAAACAATGGAAGCCTTTATAGGAGAAA GGATGAGTGGTGGGTACCTACTAGGTTAGGGAAATGAAATGAGGATGAATATTTTGTTATTTTTTTCATCTTATCCATTT GATCAATAAAAATTCCAATTGTTATTGTGGTTTCATTGTCATCATAAGTTAATAAACCTTTCTGTTTTCTATGTTCTATG TATCAGTGTACATAGATAAATGTATTGAGATAGAATTTCATTTATGCATATTGGGCGGAGGTAGAAAAAGATGACTTGGT TTTGTGGTTGGGAAGCAGGCGGTTGTGGCATTTAAGTTCATAGCTGGCTTTTAAATTAAGTTTGATGATAAAAGGGTAGT AATTGTG
CDS sequence (LotjaGi3g1v0042300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGAAACTGGCACATTCTGGGAGACCCATGAACGAGTTAGGGCTGAGTGAGCGGTTACGCGACTCACCGAGTTG CGGTGGTGATGATGGGAACAAGCCAGATTTCCGAGAACTCGATCTGGGTTCACCCATTTCGCCGTTACCGGGGCGACACC ACCGACAGAGTGCGGCGGCGGCGACGACTACAAGTACTAGTACCACCACTAGTAGTGGTTCGTCTGGGGCGGGTTCTTGC CGGAGTGGGCATAATCTGGTTACGAGGAGATCCGATTCCGGTGAGCTTTCTGTGCAGAATAGTCCGACCCGGAGTGTGAA ACCGGGTCACCGGAGATCCGATTCGTGTTCGTCGCAGCCGTTGATATACTCAGGGCAGAGTCAGAGATCTCCTTCCTCGT CTTCGTCGTCGTCCGGTGCTGCCGCTGTTAATTCGCCGCCGGTGAATGTTCTTCCGGCTGGGAACATATGTCCCTCCGGC AGGGTTCTCAAGCCTGCCATGGTGGTGAACCGGAGCTCGAGGCCGGATGTTTTGGGCACAGGGACAGGGAATTACGGGCA TGGGAGTATAATGCGGGGCGGTAGAGGCGTCGGTGGTGGTGGTGGTGGCAGCACTGGCGGTGAGGCTGGGAGGTTGAGCG GTGGAAGCGATTCGGTGAAGAGGGTTGAGGCGGAAGAGGTTAAGAGAGCAGGGAATGAGGAGTACAGGAGGGGGCGGTTT GTGGAGGCGTTGCGCCTGTATGATCGGGCAATTGCATTGTCTCCGGGCAATGTGGCTTACCGGAGCAACAGGGCGGCGGC GTTGAGTGCTTTAGGACGGTTGTCGGATGCGGTAACGACGTGTGAGGAGGCTTTGGGGTTGGATCCTAATTATGGAAGGG CTCATCAGCGCTTGGCAACTATCTTTCTTAGGTTAGGACATGTTGAGAATGCTAGGAAGCACCTTTGTTATCATGGGCTG CAGCCAGATCCTTCGGAGTTGCAGAAGTTGCAAATGGCGGAAAAGCATATTAAGAAATGTGTTGATGTCCGGAGGATAAG AGATTGGAGAAGTGTTATGAAGGAAGTTGATGCTGCTATTGCTGCTGGCGTGGACTCTTGTGCAGAGCTCTTAATGTGTA GAGCAGAAGCCCTTCTGAAGCTTCACCAGATTGACGATGCCGAATCATGTTTATCACAGATTTCCAAATGTGGACCGCGT CCTACTTCCTCATCCGAGGCAAGGTTTTTTGGGATGCTCTCTGAAGCTTATTGCTTCTTTGTTAGATCTCAGATTGAGAT GGCCCTTGGAAGGTTTGAGAATGCAGTTACGGCAGCTGAGAAAGCTAGTCAGATGGATCCCCGGAATATTGAAGTTGCTG TTTTGCTCAACAATGTAAGGATGGTGGCACGAGCTCGATTGCGCGGCAATGATCTCTTTAAATCAGAAAGGTTCACTGAG GCATGCTTGGCATACGGGGAAGGTCTGAGACTGGACCCTTCAAATTCTGTTCTCTATTGCAATAGAGCAGCATGCTGGTT TAAGCTAGGGCAATGGGAAAAATCAATTGAAGATTCCAATCAAGCCTTAAACATTCAACCAAATTATATGAAAGCCACTC TTCGAAGGGCAGCCTCAAATAGTAAGCTAGAAAGGTGGGCAGAAGCAGTTAAGGATTATGAGCTCTTGAGGAGACGACTA CCAGATGACAAAGAAGTTGCTGAAGCTCTATTTCATGCGCAAGTTGCATTAAAGAAATCTCGTGGAGAAGAAGTACATAA TTTAAAATTCGGCGGTGAAGTGGAGGACGTATCAGGTCTTGAGCAGTTTAGAGCTGCAATCGCTTTACCAGGTGTTTCTG TTGTCCATTTTCAAACGACGTCTAACCAAGAATGCAAGCAAATATCGCCTTTTCTGGATACACTTTGTGCTCGCTATCCA TCTATTAACTTCCTTAAGGTGGATATTCAAGAAAGCCCGACAATTGCTACTGCTGAGAATATTAGGATTGTACCAACCTT CAAGATATACAAAAATGGCAGTCGAGTGAAGGAAATTATATGCCCTACTCGTGATATGCTGGAACATTCTGTTAGGCACT ACAGCTTGTAA
Protein sequence (LotjaGi3g1v0042300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEKLAHSGRPMNELGLSERLRDSPSCGGDDGNKPDFRELDLGSPISPLPGRHHRQSAAAATTTSTSTTTSSGSSGAGSC RSGHNLVTRRSDSGELSVQNSPTRSVKPGHRRSDSCSSQPLIYSGQSQRSPSSSSSSSGAAAVNSPPVNVLPAGNICPSG RVLKPAMVVNRSSRPDVLGTGTGNYGHGSIMRGGRGVGGGGGGSTGGEAGRLSGGSDSVKRVEAEEVKRAGNEEYRRGRF VEALRLYDRAIALSPGNVAYRSNRAAALSALGRLSDAVTTCEEALGLDPNYGRAHQRLATIFLRLGHVENARKHLCYHGL QPDPSELQKLQMAEKHIKKCVDVRRIRDWRSVMKEVDAAIAAGVDSCAELLMCRAEALLKLHQIDDAESCLSQISKCGPR PTSSSEARFFGMLSEAYCFFVRSQIEMALGRFENAVTAAEKASQMDPRNIEVAVLLNNVRMVARARLRGNDLFKSERFTE ACLAYGEGLRLDPSNSVLYCNRAACWFKLGQWEKSIEDSNQALNIQPNYMKATLRRAASNSKLERWAEAVKDYELLRRRL PDDKEVAEALFHAQVALKKSRGEEVHNLKFGGEVEDVSGLEQFRAAIALPGVSVVHFQTTSNQECKQISPFLDTLCARYP SINFLKVDIQESPTIATAENIRIVPTFKIYKNGSRVKEIICPTRDMLEHSVRHYSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 146 | 146 | - | – | |
| PANTHER | 17 | 694 | 678 | 0.0 | – | |
| PANTHER | 17 | 694 | 678 | 0.0 | – | |
| MobiDBLite | 24 | 38 | 15 | - | – | |
| MobiDBLite | 57 | 144 | 88 | - | – | |
| MobiDBLite | 173 | 225 | 53 | - | – | |
| Gene3D | 222 | 580 | 359 | 2.1E-81 | ||
| SUPERFAMILY | 224 | 452 | 229 | 6.95E-29 | ||
| ProSiteProfiles | 224 | 563 | 340 | 22.533 | ||
| SMART | 224 | 257 | 34 | 0.12 | ||
| ProSiteProfiles | 224 | 257 | 34 | 9.558 | ||
| Pfam | 230 | 290 | 61 | 2.6E-8 | – | |
| ProSiteProfiles | 258 | 291 | 34 | 6.815 | ||
| SMART | 258 | 291 | 34 | 0.0013 | ||
| SMART | 368 | 401 | 34 | 11.0 | ||
| ProSiteProfiles | 416 | 449 | 34 | 7.877 | ||
| SMART | 416 | 449 | 34 | 3.0 | ||
| Pfam | 420 | 448 | 29 | 0.015 | ||
| SMART | 462 | 495 | 34 | 32.0 | ||
| ProSiteProfiles | 462 | 495 | 34 | 6.461 | ||
| SMART | 496 | 529 | 34 | 2.7E-5 | ||
| ProSiteProfiles | 496 | 529 | 34 | 8.791 | ||
| SUPERFAMILY | 499 | 694 | 196 | 3.35E-28 | ||
| SMART | 530 | 563 | 34 | 31.0 | ||
| Gene3D | 581 | 694 | 114 | 1.5E-17 | ||
| CDD | 601 | 688 | 88 | 7.62049E-21 | – | |
| Pfam | 602 | 683 | 82 | 2.5E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi3g1v0042300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…