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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0047100 |
| Transcript ID | LotjaGi3g1v0047100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin family protein; TAIR: AT1G53140.1 Dynamin related protein 5A; Swiss-Prot: sp|F4HPR5|DRP5A_ARATH Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A072U158|A0A072U158_MEDTR Dynamin 5A-like protein; Found in the gene: LotjaGi3g1v0047100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5016547..5022969) extracted from Lotus japonicus Gifu genome v1.2.
GTTCAACACATTTTATTTAGTCGCAACCCAACAAGTTCAAATACAACGGTCGAAAAGGAAAGAGACCAACCCCAAATTCA AATTCAAACTCCATCCATCTCTCCCTCCCTCCATTCCCCACTCAAACCACGGCAACCATGTCATCCTCCACCGCCACTCC TCCCACCAAAACCCCATCGGACAAATCATCCCGCCGGAGACATCGCCCCGATTCCACGTCTCGATTTGAGGCCTACAACC GCCTCCAAGCCGCCGCCGTAGCCTTCGGCGAAACACTCCCAATCCCGGAGATCGTCGCCGTCGGTGGCCAATCCGATGGC AAAAGCTCCCTCCTCGAAGCCCTCCTCGGGTTCCGCTTCAATGTCCGCGAGGTCGAGATGGGCACTCGCCGCCCCCTTAT CCTCCAAATGCTCCATGATCCCTCCGCCGCAGAACCTCGCTGCCGCTTCCAGGTTCAAAATCGCCACCCATTTCTATCAA TTTTTGCTTTCTGGTTGTAACTGCAACCGTAACGTAACTGAATTCGGTTATTAAACGGTTATAACAGTTGTAACTGATTT GCAGGAGGAAGATTCAGAAGAGTATGGAAGTCCTGTGGTTTCTGCTTCTACCATTGCTGACATTATCAAGTCTCGAACCG AGGCGCTTTTGAAGACGACGAGGACCGCGGTTTCCCCGAAGCCGATTGTGCTGAGAGCTGATTACGCGCATTGTCCTAAT CTCACGATTATCGACACGCCGGGGTTTGTTCTCAAGGTTAGGGTTTTGGAATTTGGGAATGGGGTTTTTTAGAGGTGAGG AGATGTAGAAGGTTTGATTTTGTGTTTGTGTTTCGCAGGCGAAGAAGGGTGAACCGGAGAGCACGCCTGAGGAGATTCTT TCGATGGTGAAGTCATTGGCTGCTCCTCCACACCGCATTATCTTGTTCCTTCAGCAGAGTAGTGTTGAGTGGTGCTCCTC ATTGTGGTTGGATGCGGTTCGCGAAATTGATCCCACGTTTAGACGGACGGTTGTTGTTGTATCTAAATTTGATAATCGAC TCAAGGTATGAATTTGATGATATAATTCTTTAGTTAACTCATCAACTTATGATTGTTTTTGTTATCAATTGGTAGAAGTA TGCATGGAGTATATGGTGTTGTTTCTGCATTTAAATTGTCTGTGAGTTAGACATGGACATCATTAGATATTATGTGTGTG ATTGGGTGAGCATTTGGAAATGTGTTTCTGAATAAATTTGATTTTTTTTTGTAGAATTGATTTGGTTAAGCATGATTGGA GTAGAGTGATTCATGTGTAGATTTTAATCAATTATAGCATTCAAAAGCTACTTATAGAAGTTTCTTTCTGAAACTGATTT TGACTTTAAAATCAATTTTAGAAGGGTTTCCAAACATGCTAATAGATAGTTAATTTTACTCAAAACCATGTTCCAACCCT TGAGGAATATGTTCTCAAACATGTTAAAAATTACAAAACCATGTTTTGAAGATTGGAGTCGTGGGTTGGATGATGCAAAT GCATAACTAAACATGGTATGTTACAATATATGAAGTTGGTTGATTCATGTAGCTGACATCATGCAGTGAAATAGTGCTTT GGTTATTGTTGTCTCGGCGATAAGCTATCTGATGCTTGCAGGAATTTAGTGACCGGTGGGAAGTAGATCGCTATTTGAGT GCAAGTGGATACCTTGGAGATAGCACTCGCCCTTATTATGTGGCCCTGCCTAAGGACAGAACCAATGTTTCGAATGAGGA GTTCCGTAGACAGATTTCTCAGGTGGACTCGGAGGTTATTCGTCATCTTCGTGAGGGTGTCAAGGGAGGTTTCGATGAAG AAAAGTTCAAGTCCTATGTTGGTTTTGGCCGTCTGAGGGATTATTTGGAGTCTGAGCTACAGAAGAAATACAAAGAAGCT GCGCCTGCAACTCTTGCATTGCTTGAGCAACGGTGTGGTGAAATCACTTCTGAGCTTGCCGGACTGGATTCAAAGCTACA GGCCACTTCAGATATTTCTCATCTTAGGAAATTCGCAATGCTGGATGCAGCTTCTATCAGCAACCATGTGGTTGGTACTT ATTCATGACTGATGAACCGTGTTTAACAGTTTGTACAAAACCACTTATTGTGTCTCTACTCATATCTATAAACTTTTTCA TTGATGGACCAAGTTTATATTGCAAAAATTTCTCTTCTGATGGATTTAATGTACCATATATATTACTTACACCCTTTGGT CTCCACACCTTGGACCAAGTTTATAATGTATTCTAAGCTTCTATGCAATTCACTTACACAAATGAGCTGTAATTTTGAAC ATCTTTCAACAAAGGGTGTCAACGATTATGTGCATTTGTTTTAAGTTGATAGGTGCATCTTTTGTTTTGTTCCAGGGTGC ATTGATTGATGGTGCAGCGGATCCTTGCCCTGAGCAGTGGGGGAAAACAACAGTACAAGAGAGGTCAGAAAGTGGTATTG GGGTTTGGCCTGGTGTCATTACGGATGTAAATCCCCCTAATGCTACCCTTCGCCTTTATGGAGGGGCTGCATTTGAGAGG GTGATGCATGAATTTCGTTGCGCTGCATATTCCATTGAATGCCCCCCGGTGTCACGGGAGAAGGTGATTTAATTTTCATA TACTCATTGGAGGAACAATTTTTTTTGAGATTTCAACTTCAAATTCTTTAGTGTCATTTTCACAGGTAGCAAATATATTA CTTGCCCATGCTGGCCGAGGTGGGGGAAGAGGACTAACAGAGGCTGCTGCAGAGATTGCACGTGCTGCTGCTAGATCATG GCTTGCTCCTCTTCTTGATACTGCTTGTGATCGGCTTGCTTTTGTTTTAGGAAGTTTATTTGATTTGGCTCTAGAAAGAA ACCGCTGTCGTGATTCACAATGTAAGTGAAACTCCTTGTTGGTATACCGTTCAGTTGTCAGTTGTGTTGTTGGCTCTAGA TTGGGTGTGCATGTGCTTTTCTCAATCCAACAACTTTCCTCACTTGAAAAATATGTCAGTTGAATCATGAATGTGTTTTC GACTGGAAACTAAACACATCCATTTGATTAGATGTGAATATGTGAATGTACGTTTTCTCAAACCAAATACTTAGCTCAAT TGGAAAAACCCTCTTGGAAAGTTGAATGCACCAGAAAATAAACACTTTCTTATTTATTGGGTTCTCACTACTTGAATGTC AAAAATTTCCTCAATAGTTGATTCCATTTCCCATTCCAACTCAGGCATCAAGTCAATCCTTTGCACGGGTTCTGATTTCT TCAGCTTAAAGATATTTTTTAATTTACATTTGGGCAATTGAATATTTCATTGTCCTTCCAGAACTTAAATATACAAAAAA AGAAAAAAAGTTGTTCTACTATCATCTTTTTTATATGTTTTCTGGGAATGCATATATTCATTTCATTTTGTGTTAATGTC TTGGGATTTTCCCCCTTCAATTGTCTTTTAGATTTTAACCATATTTTGTCTATTTTGTGATAAAGGCATAAAGCATATAA CCCCTTGTAACTTTGTAAGGAATAGGTAAAGCTTAGTGGTGATTATGTTTTTTGCATCTCTTATATTTTGATATTATTTC TTGCAACTGATTCGAAAAGCTTACTGGTGTTTTTTCCCACCTTGAAGATGGGATTAAATCAGGAAACATGGATGGCTATG TTGGTTTTCATGCTGCTTTACGGTGTGCATACAGTCGTTTCATAAAGGATCTCACTAAGCAGTGCAAGCAGCTTGTGAGG CACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTACTTCAATGAATTCCAACCCAGTTCTGGCCAAAATGC TGCCACTTTCAACAAATTCAGCCAGGCTTTCCTTGATTTGAGCGACACGAGTTCAGCTTCCAATCATGATGCAATGAGGG ATCAGGAAAACATACCTCCAGAAAATAATAACATGCAGGAAACCACACCGGGTAAAGCTGCAGCAGAAGCTAGAGACGCT TTGCGAGAAAGCCAAATGACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGATCCAAAAAAGAGGGAGCTTGGAAT TTGTAATGACCTTGGACCGAGGAAGAGGGTCTCCAGAATGGCAGGAAATGGAAAAAATTCTGAGTATATTAGGCCGCAAA ATGGGGGCATTTTGTTTGGAAATGGGGAGAGATCAGGTTCACCTTACTCAGAAATCTGTTTATCAGCTGCCCAGCATTTT GCACGTATACGTGAAGTTCTTGTTGAGAGAGGCGTGACATCAACCATGAACTCTGGATTCCTAACCCCTTGGTAAGCTTC TGTACTTTTCTAAAACCAGTTTCGGCCTTAATTTTGCTTGCTTAATGCATCACTATAAAAGTTCAAGCTATAGGCGGTAC CATATTGATAGAATGATTTAATCAACGGGTGATTGGTTCTCGGCTCGAGTCTAGTGAATTGATAATTTCGGCTGGAAGAG TTATCCCCAAATGATGTGGATGTTCAATTCTCAAACATGATTAGCTCCCACGGATGATACATGTGGTAAAAAAAGAATAG ACGATACTGTTCTCTCCATATTCGGGGAATTAAGCCAAGTGTACAAGAACACTTAGCCTTAGGTCCCAGAATCCGTGGTG ATTGAACTTATTTTTCCCGTCATTGTTGGGGGCTATAAGGTTTAGGATTGCTTGCCTCTTGGGTTCTTGGTTGCTCTGGG TAATATGATACTTTATTGGTCAATTTAGTGGCTTAATGATCACCTTAAGGGTAGCCTTGATGATTGGCTTAATATCCTTG GAGGTTACAAGCGGCCTCTTAATTACGTGTTAACATAGTTCACTATCTAGGCCGAGCTTCCTGCCCTTAAGTTCGAGTTT GAGTCTTCCTTACTCGGGGGAGGTACACAACCCTCCAAGTCCGAATTTAGCTTAATGGACTTGAACTAGGGAGGTAGAGA TACATAAGGTAACAGAAAATATTGGTAGAATGTTCTCAGTACTGCACTATTACCTTTCTGTAGAATGTTTTAACTTCAGA AATACTCCAACCAAATACCTTTCCCTTTCCAAATTCATGATGTTTTCCGTCACATATTTCCATTAAAGAGCATCCTATTG TGCTCTTTCCCACCATCATCACCTTGCAGTGGCAAATTAACTTCAAGCCTCAAAGGGTACTAGTTTTTGTTATTTTTCTC TTCTGGTTGATTTAATTTGTTTTACAAAAATTAGGTTTTTGCTCCTCATATCTTCTTCCTAATGAATAATATATTTGCTT CTATTCATGTTTCTTTTTTGAATTATATTCTTCTTAAACTTATGCTCACCCTTTTTCAGACCATAGCCAGTTTTGATATA TCCGCACTCACTTTGTCTTTCATCATATCTTTCACTCCTCTCTTATACTAGTTTTTGTTATTTTTCTCTTCTGGTTGATT TAATTTGTTTTACAAAAATTAGGTTTTTGCTCCTCATATCTTCTTCCTAATGAATAATATATTTGCTTCTATTCATGTTT CTTTTTTGAATTATATTCTTCTTAAACTTATGCTCACCCTTTTTCAGACCATAGCCAGTTTTGATATATCCGCACTCACT TTGTCTTTCATCATATCTTTCACTCCTCTCTTTCATTCCAATCTCTCTCTAGGGGTCGGGTGGAATTGGGGTGTCAATGT ATAAATTTCCTAACCTCATTAGATAACATGGATCTAATTTATATATGGTCTATATGGTCCACATTACCTCAGTGTATGCA ACTATCAATTACAACGCCTGTTTTGTTGTGTTTATTTGTGCAGCCGAGAGGGACTTCTCGTGGCTCTCATGTTAGATTTA TTTGCTGTGAATGATGAGAAATTCATGGACATGTTTGTTGCTCCGGGCGCCATAGATGTTCTGCAAAATGAACGAGAGTC TCTAACAAAGCGTCAGAAGACACTCCAGTCTTGCTTGAATGAGTTTAAAAATGTTGCTCGAGCTCTTTGATCAGAGTTAC TCACTCTCCGAGATGCCACGATTTTCGCTACGCTTTGGAGAATTTGTTGTGCTTGTGAAATTAACGATGCAGTTCTTGTA TACCAAATGGACCAAATACTATGGAGACTCCCATAATTTGGTGTGACTCTCATGGAAAGAATGCAACTTGGGTGAAGCCT CTTCACCTTCTTGTGGAAGCATATATATGTAGATGTAAGATGTGAGACAGATTGACTTGTTAACGTGCATTTAGAGGCTA ACATGATTGGTTTGATGTAGTCACATTCACAGCTTGCTGAAAGCTCTTGAATAATCTTTCACCTCACACAACTTGCACCT TTTGCCTTTTGGTCTCAGTTGCAGATTATTTGAAATGATAAAAAATATACAAGCCTGTATTATTTTTTAATGAATGATTA TTTAATTTTATTTTTATTATGTA
CDS sequence (LotjaGi3g1v0047100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATCCTCCACCGCCACTCCTCCCACCAAAACCCCATCGGACAAATCATCCCGCCGGAGACATCGCCCCGATTCCAC GTCTCGATTTGAGGCCTACAACCGCCTCCAAGCCGCCGCCGTAGCCTTCGGCGAAACACTCCCAATCCCGGAGATCGTCG CCGTCGGTGGCCAATCCGATGGCAAAAGCTCCCTCCTCGAAGCCCTCCTCGGGTTCCGCTTCAATGTCCGCGAGGTCGAG ATGGGCACTCGCCGCCCCCTTATCCTCCAAATGCTCCATGATCCCTCCGCCGCAGAACCTCGCTGCCGCTTCCAGGAGGA AGATTCAGAAGAGTATGGAAGTCCTGTGGTTTCTGCTTCTACCATTGCTGACATTATCAAGTCTCGAACCGAGGCGCTTT TGAAGACGACGAGGACCGCGGTTTCCCCGAAGCCGATTGTGCTGAGAGCTGATTACGCGCATTGTCCTAATCTCACGATT ATCGACACGCCGGGGTTTGTTCTCAAGGCGAAGAAGGGTGAACCGGAGAGCACGCCTGAGGAGATTCTTTCGATGGTGAA GTCATTGGCTGCTCCTCCACACCGCATTATCTTGTTCCTTCAGCAGAGTAGTGTTGAGTGGTGCTCCTCATTGTGGTTGG ATGCGGTTCGCGAAATTGATCCCACGTTTAGACGGACGGTTGTTGTTGTATCTAAATTTGATAATCGACTCAAGGAATTT AGTGACCGGTGGGAAGTAGATCGCTATTTGAGTGCAAGTGGATACCTTGGAGATAGCACTCGCCCTTATTATGTGGCCCT GCCTAAGGACAGAACCAATGTTTCGAATGAGGAGTTCCGTAGACAGATTTCTCAGGTGGACTCGGAGGTTATTCGTCATC TTCGTGAGGGTGTCAAGGGAGGTTTCGATGAAGAAAAGTTCAAGTCCTATGTTGGTTTTGGCCGTCTGAGGGATTATTTG GAGTCTGAGCTACAGAAGAAATACAAAGAAGCTGCGCCTGCAACTCTTGCATTGCTTGAGCAACGGTGTGGTGAAATCAC TTCTGAGCTTGCCGGACTGGATTCAAAGCTACAGGCCACTTCAGATATTTCTCATCTTAGGAAATTCGCAATGCTGGATG CAGCTTCTATCAGCAACCATGTGGGTGCATTGATTGATGGTGCAGCGGATCCTTGCCCTGAGCAGTGGGGGAAAACAACA GTACAAGAGAGGTCAGAAAGTGGTATTGGGGTTTGGCCTGGTGTCATTACGGATGTAAATCCCCCTAATGCTACCCTTCG CCTTTATGGAGGGGCTGCATTTGAGAGGGTGATGCATGAATTTCGTTGCGCTGCATATTCCATTGAATGCCCCCCGGTGT CACGGGAGAAGGTAGCAAATATATTACTTGCCCATGCTGGCCGAGGTGGGGGAAGAGGACTAACAGAGGCTGCTGCAGAG ATTGCACGTGCTGCTGCTAGATCATGGCTTGCTCCTCTTCTTGATACTGCTTGTGATCGGCTTGCTTTTGTTTTAGGAAG TTTATTTGATTTGGCTCTAGAAAGAAACCGCTGTCGTGATTCACAATATGGGATTAAATCAGGAAACATGGATGGCTATG TTGGTTTTCATGCTGCTTTACGGTGTGCATACAGTCGTTTCATAAAGGATCTCACTAAGCAGTGCAAGCAGCTTGTGAGG CACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTACTTCAATGAATTCCAACCCAGTTCTGGCCAAAATGC TGCCACTTTCAACAAATTCAGCCAGGCTTTCCTTGATTTGAGCGACACGAGTTCAGCTTCCAATCATGATGCAATGAGGG ATCAGGAAAACATACCTCCAGAAAATAATAACATGCAGGAAACCACACCGGGTAAAGCTGCAGCAGAAGCTAGAGACGCT TTGCGAGAAAGCCAAATGACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGATCCAAAAAAGAGGGAGCTTGGAAT TTGTAATGACCTTGGACCGAGGAAGAGGGTCTCCAGAATGGCAGGAAATGGAAAAAATTCTGAGTATATTAGGCCGCAAA ATGGGGGCATTTTGTTTGGAAATGGGGAGAGATCAGGTTCACCTTACTCAGAAATCTGTTTATCAGCTGCCCAGCATTTT GCACGTATACGTGAAGTTCTTGTTGAGAGAGGCGTGACATCAACCATGAACTCTGGATTCCTAACCCCTTGCCGAGAGGG ACTTCTCGTGGCTCTCATGTTAGATTTATTTGCTGTGAATGATGAGAAATTCATGGACATGTTTGTTGCTCCGGGCGCCA TAGATGTTCTGCAAAATGAACGAGAGTCTCTAACAAAGCGTCAGAAGACACTCCAGTCTTGCTTGAATGAGTTTAAAAAT GTTGCTCGAGCTCTTTGA
Protein sequence (LotjaGi3g1v0047100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSTATPPTKTPSDKSSRRRHRPDSTSRFEAYNRLQAAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVE MGTRRPLILQMLHDPSAAEPRCRFQEEDSEEYGSPVVSASTIADIIKSRTEALLKTTRTAVSPKPIVLRADYAHCPNLTI IDTPGFVLKAKKGEPESTPEEILSMVKSLAAPPHRIILFLQQSSVEWCSSLWLDAVREIDPTFRRTVVVVSKFDNRLKEF SDRWEVDRYLSASGYLGDSTRPYYVALPKDRTNVSNEEFRRQISQVDSEVIRHLREGVKGGFDEEKFKSYVGFGRLRDYL ESELQKKYKEAAPATLALLEQRCGEITSELAGLDSKLQATSDISHLRKFAMLDAASISNHVGALIDGAADPCPEQWGKTT VQERSESGIGVWPGVITDVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGLTEAAAE IARAAARSWLAPLLDTACDRLAFVLGSLFDLALERNRCRDSQYGIKSGNMDGYVGFHAALRCAYSRFIKDLTKQCKQLVR HHLDSVTSPYSQVCYFNEFQPSSGQNAATFNKFSQAFLDLSDTSSASNHDAMRDQENIPPENNNMQETTPGKAAAEARDA LRESQMTIPETPSPDQPGDPKKRELGICNDLGPRKRVSRMAGNGKNSEYIRPQNGGILFGNGERSGSPYSEICLSAAQHF ARIREVLVERGVTSTMNSGFLTPCREGLLVALMLDLFAVNDEKFMDMFVAPGAIDVLQNERESLTKRQKTLQSCLNEFKN VARAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| MobiDBLite | 14 | 29 | 16 | - | – | |
| PANTHER | 23 | 805 | 783 | 0.0 | – | |
| PANTHER | 23 | 805 | 783 | 0.0 | ||
| SMART | 26 | 269 | 244 | 1.1E-8 | ||
| SUPERFAMILY | 27 | 341 | 315 | 2.38E-40 | ||
| Gene3D | 29 | 380 | 352 | 2.3E-59 | – | |
| ProSiteProfiles | 46 | 333 | 288 | 75.683 | ||
| CDD | 47 | 333 | 287 | 6.57611E-70 | ||
| PRINTS | 49 | 67 | 19 | 1.0E-14 | ||
| Pfam | 52 | 232 | 181 | 2.8E-34 | ||
| PRINTS | 74 | 91 | 18 | 1.0E-14 | ||
| PRINTS | 152 | 169 | 18 | 1.0E-14 | ||
| PRINTS | 202 | 220 | 19 | 1.0E-14 | ||
| PRINTS | 221 | 237 | 17 | 1.0E-14 | ||
| MobiDBLite | 604 | 630 | 27 | - | – | |
| MobiDBLite | 604 | 668 | 65 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0047100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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