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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0052800 |
| Transcript ID | LotjaGi3g1v0052800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase; TAIR: AT1G77030.1 putative DEAD-box ATP-dependent RNA helicase 29; Swiss-Prot: sp|O49289|RH29_ARATH Putative DEAD-box ATP-dependent RNA helicase 29; TrEMBL-Plants: tr|I1JJY8|I1JJY8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0052800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5526049..5535218) extracted from Lotus japonicus Gifu genome v1.2.
TTTGGACTTATTATCGGATCCGCACGCATGAACCCGACCCGAAACCTAAATGCCCGTTTCGTCTTCGTTTTTAGGTATTT CACAGACACAGTTGAAGCATTGAGGGTTTAAGCTTCAACCTTCAACCTCCTTGCAATTTCATCACAGAGCAATATGACTC GTGAAGCGACCATGAAGAAGAAGAAGAACAACGCTAAGAAATCATGTGGATTCGAAACAATGAATCTGTGTCCCAACGTG TTCAGAGGAATCAAGCGCAAAGGCTACCAAGTTCCAACTCCAATTCAGCGGAAAACCATGCCCCTCATCCTCTCCGGCGC CGACGTTGTTGCCATGGCTCGTACTGGTTCCGGCAAAACGGCGGCGTTTCTGCTTCCTATGCTTCACCGGCTCAACCAGC ATCTTCCTCAGGGTGGTGTTAGAGGACTCATTTTGTCGCCTACTAGGGATTTGGCGCTTCAAACTCTCAAGTTTACTCAG GAGCTTGGACGGTTCACTGGTTCGTTCTGCTTTTGATTCGATGTTTGGTTTTTGCTAAATGGGCACCTTTGGTTTTTTTT TTTTTTTTTTTTTTTTACTGTTTCATGTTTGATTTTAGGAAACAAATGTTCATATCAATTTTAGCTTTACACAATAGAGG ATATAGTAATAGAAGAAAGAGAAGTGTGAGATACGACGAGTGATGTGATAGGAAAATAAGAGACGGATAAGAAGAGTAAG TGAGTGGAAGATACGACGAGCATTGAACAAAATCACTTTTAGGTGGTTATATAGACGCTCGACAATCGACTTTGAGAATA AATTTTAGTTGCTAGAGAGAGTAGCTTCTGTGGTGGACTTTAGAATAATTTTTTTGGCGATAAAATAGCTTTCATTAAGA AATCAAATCAGATGAGAGAAGCTCCGTCAGTATAGGAGGATAATCCTCAACCCAAACACCAAACAACGCAAAAGCTCGAC AGTGCAAAGTTGGCAAGGCAATTGACTTAGAGAATAAGGCCCCGTTTGGAAGGGCTTATTTGAGCTTATCTGATAGCATA AACGCTTATGCCAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGACCTACCATAAGCGGTTTTGAGCTTATTTTCATAA GCTACTTATGATAGCTTATGAAAAAGATCTTATGCTTATATATAGCTTATTTTCAATTTAATTCAATACATTTTTTAAAA TAGCTTATGAATAAGCGCTTATGACCATAAGCGCTTAATTAAGCTGTTTTTCCATACGGGACCTAAACTTTAGTTGCTAG AGAGAGTAGCTTCTGCGGTGGACATAATCAATTGTGGGAATTTCATAATAGATTTCACACAATTATCACTTTTCTCATAA ACGTATCCCGATATAAATCATTTCATTTTAGCTTTTATTTGATGCTGCCCTCCTTGTCTATACACGTGCATCTTTTGATT TTGTTTTTGATTATTTTATTGATTGGGTTTTTATTTTTTTGTGTTGCTACCCTTTCTAGTTACATGAGCAACTTTTGATT CTGTTTCTGTTTGTTTGTGTGCCAGACCTTCGTGTAAGTTTGTTAGTTGGAGGTGATAGTATGGAAGCTCAGTTTGAGGA GTTAGCTCAGAGTCCGGATATTATAATTGCCACTCCTGGTAGGCTTATGCACCATTTGTCTGAGGTGGATGATATGAGCT TGCGTACCGTGGAGTATGTTGTTTTTGACGAGGCTGATTGTTTATTTGGAATGGGTTTTGCGGAGCAGTTGCACAAGATT CTTGCTCAGCTTGGTGAGAACCGTCAGACCTTGCTTTTCAGTGCTACATTACCCAGTGCACTTGCTGAATTTGCCAAGGC TGGTTTGCGAGACCCTCAGCTTGTCAGGCTGGACTTGGAGACTAGAATTAGCCCTGACTTGAAGCTTGCCTTCTTCACTT TGAGGCAGGAAGAGAAGAATGCTGTGTTGCTCTATTTGATCAGGGAGCATATTCGTTCTGATGAGCAGACATTGATTTTT GTGTCCACGAAACACCATGTGGAGTTTCTCAACATGTTGTTCCGGGCAGAGGGTATTGAGCCCTCTGTATGTTATGGCGA CATGGATCAAGATGCTCGCAAAATCCATGTATCAAGGTTTAGGTCAAGAAAGACAATGTTGTTGATTGTGACAGATATTG CAGCTCGAGGCATTGATATTCCACTCCTTGATAATGTTATCAATTGGGACTTTCCTCCAAAGCCTAAAATATTTGTCCAT CGAGTTGGAAGGGCTGCAAGGGCTGGTCGTACTGGTACAGCGTATTCTTTTGTGACTACAGAGGATATGGCCTACCTTTT GGATCTTCATTTGTTCCTCTCAAAACCAGTCAAAGCTGCTCCCACCGAAGAAGAGTTCTTTCAGGATATGGATGGAGTAA GGTCAAGAAATGATCAGGCACTGGCTAATGGAGTAACCATTTATGGTCGTTTGCCCCAAAAGATCATTGACCTTGTTTCA GACAGAGTTAGGGAAGTGATTGATAATTCTGCAGAACTGGAACTACTGCAGAGAACCTGTAAAAATGCATTTCGTTTATA TACAAAGACAAAACCCTTACCCTCGAAGGAGTCCATTAGAAGAGTGAAGGATTTGCCCTGTGAGGGATTGCATCCAATTT TCTATAATGTGTTGGAAACAGGGGAGTTAATGGCTCTTGCATTTTCTGAGAATTTGAAAAAGTTTAGGTGAGTGCAGAAT TATGCTCATATGCTAGAGTCATTTCTGTATATTCTTTAGTAGACTAGATTGTATGAAACATAGCCTTAACAATTCAATAT CAGGGGAAAGCAAACCATTTTGGAAACTGAAGGGGAAGCAGCTAAATCAAAGCATCGAAAGGTGGGTTTTGACTTTGAAT ATGTTATGCATATTTTGTTTGATTAAGAATTCCACACTTTCATATCATTAAATATTTTTATTTGTTTGATTTGATATTAG GAATAAAACTTTCTAGTTCCCCCCTCCAGTGATTAAATTTCGTGCTTCTCTTGAGCAACTCAACATTTTCCATTTTAATA TATTTGCATACATGAAAATTGGATAATCATGGTGTCTGGATGATATATCTATCCATGATTCTTCTAGATTCAAGTTCATT TTATGCTTGTTATTAAATCTAAAATAGCTTCACTTGTTTAACAGATTTAAATTTATTATGAAATATTAGTGGAGAAATTG TATGGAATTCACTTGTTGAAGTGTTTCTCCTTTCACTCAAGCTCATTTTTTTTCACCACATAATAAATGATGATAGAAAG AAGACTTGTTTGTCTTTCACTCAAAATACAATGTCCTATTAGATTAATCCGCAGGTTTGATGCAACTTTTGTTGATATGT AGTGCTCTGGAGTATAGAGGGTGATATAAATTGTTATAGTGATCAATTCAACAAATTAACTTGTAGTTTATTGCCTTTAT ATCCAATGTATTGTTTGTGAAAAACTGCACTCTTGATGTCTTTCTTCAAACAACACTTAAATATGCGCATGCCATACTTG CATTTTACGTTTCGCATAAGCATGAATTGAAGAAGTTTTTCTCAGTCGGATATGAAATCTGTAATTGTTTTGTTTACAGC ATATACATCTTATTATGTCTTTGACATTAGATCTTATGATGCTATTACTTCAACTCTTCTTATGTAAAATATCCATCTCC TCATGGTTTGAATTTTGGCGTGTTCTACTCACAAATACATCGTGTCATGGTATATATATTGAATGTCCCTGTCGATCTTC CATTCATGTTCCATGCTATATCATGCTGGAGTTTACACCGCATGCACCTGAACCCACTACTATCTGTTATGTTGCGCATT TCTATATTGTTTCCTTTCTGCTTTACCTTTACATTAATAATGATAATGATACTTATTAATTGCAGGGGCCTTCTGGCCAA TGGGTTGATGTGATGAAAAGGAAAAGAGCCATTCATGAGAATATTATAAATTTGGTTCGTGAACAGAATTCTAAGAAAAA TATGGAGAAGGTATGGGGCTATTGCTCTAATTCAGATTTGGAAATTCAACCTTCTTTTTTCATTAACTTGCTTTGTTCTG ATGACTAATAGGAATCAATCTATTTAGCTTACTTGTGCATTTCCTTTTCCATATGCTCATATCTTGAGGATATAAGTTTA TTTTCTCCTTGCAGGAGGAGGAGGAAGTTGAATCAGAAATCACTCCTTTGGGGAAAGGAAGAAAAGGTTTTGTGCCATTT TGTTTTTGTCATCAGACTTCCTTTGATTGTTGTATTTTTTATTTTGTGACGTGGATTGTCCTTATTATAGTACCTTTTTT CTTTAGTTGTTTTATTTTAGGCATTAAGATATGGTTTTATGACATTTGCTAATCTAGGCCTAGTTCCTAGTTCAACCTAG GGTGTACAAATGTGTTTAAGATGATTTCTATTAAAATCAACATCAAGAACTTGTCATAGGCTTATCATGAGAAAAGCATT AAAGGAAAGGAAAAAGGTTACTGACTAGTGGGAATAAAATTAATTAATCACAACAAGGAACTAGAAAATGTTTATAACAT GGCAACAGATTTGTTTGAAGGTTGTCTAGATTACTTGCTTTGACCTATATTGAATTGACCTTGTACCCACCGAGATTAGT CACTAAAAATTACTACCTATAAAATGGATGAGTGGGCATACTAGATAAGATGGATTAGGAATGAAATCATGATAGAAAAA TTTGTAGCAGGACATATTGTGGGAAAGATAGTAGAGTTTCACTTTAAGTGATTTATTTGGGCATTGTAGAGAAAACCCAT GGAAGCCCTGGCAAGGAGGGCACAATGGAAGATATTGCAATAGTTGGAAGTAGAGGGAGACCAAGGAAACTGAGTCAAGC TGCTAAAGTGAATTTAGATTTAAGGGGTTCCTAATTAAACATGATTTATCGTTCAATCCATGAAACTGACCTCACCTAGT GGAAAAATACTTATGTTTTGCTGTTCCTTAGTGATTCTTTTTCCTCTTATTCTCTTGTAATTTTATTCTCTTTCATCTTA ATAAATTTCTGCTTTTGCCAAAATAACAGTGGGATTTTAGCTTTTCCTTCATCTTTCAATGATAGGACTTTGTCCTTTGA AAAACTCGGAGATAGAAGCAACTAGGACCATAATGCTTATTATTTCAGTTTTTTGTATGCTGCCATCTTTATTTTCCTTG GCATGGATGTTACTATGTTAGTGCTGCCTCACTCATTATGGCTGAGTATTGAATTTTCTTGTTTACCAGTTTTTTTATCT AAATCATAGGACAGGCCAATTGCGAATACTTTTTCTTGTCCAAATCCCCTCCCCCAGGATTTTTAAATCTCCTTATCAAG CAAGTGCCTTTCTAATGCCTTGTACTTGTAAACACTAACACTATGTTTGTTAGGGTGGAGATACAAGAGAGAGAGATTGA AGAGAGATAGCTTAAGTTCCTTTGTTTGGTTGGAGAGAGAGAGATGAGGGAGGGTGCTATATGTGGTGGGCCATCATGCT TTTCTTGGTCTTCAAAATTTGAAGAGATTGAGAGGAGAGAAGGGGAGAGGATAACTCTTATACCCACTTTCCTATTTTAT CCCTCTATCATTATCATACTAATTTATAAATATATATTTTTATGGTAAAATTGTCATTTCACATAAAAACAATCTTATCT CTCTTCTCACTCTCTATTCAACCAAACTAGAGGAGAGAGATTCCACCTCATCATTTCTCATCTCTCTCTCATTTATCTCT ATCATACCAAACAACCTCTTAAATCCACTCTATTTCTCACATATTTCTCTCTACTCAACTTCTCTCTTCTCTACTCTCTC TTCTCTATCTCTCTCTACCCTACCAAACAAAGTGTAAAGAATCTAGCCCCTCAATATTATGTTCTCTTCTTCTTGGCAGT TAAGGTTGGGTTATCTTAAGAATTGTAGGTTAAAATTTGATAGAAAATTCAGGGTTTTCTTTTACTTGTGTATGCTTTTA GGATTTGAGTAAAAAAAAACTACATAAGGAAGGCAATAGTCATGATGAATTTCTGATTCTGTTTACTTTGGTTTCAGCAA CAAGTGGTCTTAAGAGAAAGGCCGAAAGTTTCAAGGATGATGAAAACTATATAAGTTCAATACCTAAAAATCAAGTGAGT CCATGTGTTTGACTGTTCTTCATAGTTTATCTGTGGATCGGAAATAAATATACTCTGAAATGTAATGGTTGTACTTTGGA AACTGAAAACTTGTCCACCCATTTAACTTGTTTCTGCTATTATTCTCAGCACATGGAGGCAGGCCTTTCGGTAAAAGCTA ATGAAGACTTTGGTTCAAATAGGTAAATATTTACTTGTGTAGTTATTAATCAGACCTTGATATTTGCTACTTTAAACTGG CTGCTGGAGGGGGGGGGGGGCAGGGGTTTTTAGTGACTGCCATGATATCCTGCTGGCCCATTCTGAATCAATACTCAATA GTATAGAAGCAAAAAGATGGAACAATAACTTATGGCTGATTGTTTTTGTCCTTTGGTGTTTAATGTGTTTGCTTTGTATT ATATTGTGATTGTGATATTCAGCCTGGATGATTCAGTTTTACATAAACCCTCATACATTCTCTTTATATTTTTTTAGCTT TTGTTTTTTAGTTGAGGTCCTAATGATATGTTGTCATTGTGCAATATTTAAGATTGGAAGCAGCTGTCCTAGATCTGGTT GCAGATGATGGTTCTGGCATTCAGAAACAAAGATCTCAATATCACTGGGATAAGGTAATGCATTGCGAAATGCTTGTGGT TGAATTGTTAATAAATGAGTAAAAAAGCCAGACAAAAAGTTATGTTTGAAGATTTTAGATTTTGATCAAATTTGTCACTT ATCTCATATAATCCTTTTTGCTGTCAGAGGGGTAAAAAGTACATCAAGTTAAACAATAATGACCGTGTTGCTGCAAATGG AAAGGTATAGTATTTATAAGGCTTCATCTTTTACGTTGGTATTTACCATGTAAGATGGGATTCTTTTATTTACCCACCTG TAGGATTTAGGACATAACATTTATATTTTCTATTTGAGCACAGATAAAGACAGAGAGTGGTGCAAAAACGAATGCCACCA AGACTGGTATATATAAAAAGTGGAAAGAACGCTCACACAATAAGGTATCTCTTAGAGGGACCAATACTGATGGTGAAGCT CATGGGTCCTCAAGTTTCTCAGGTAATGTACTTAATTTGTTTCTCCTTTTAACTTGTGTGTTTGATGAATGCTGTTAATT GGTAAGTAGTATTTATCATCTAAGAAACAATATTTCTGGGGACTACATGGGTTCCTCTTGTCTCATTTCCCTAGTAAGAA TTATTGTGGCTTTTAATGTAAAATGCCCTTTTGTGTTTTATTTTCTTTAAAATATGGTAGAAGTTTACTAGACTCCATGA AATATACAAATCCAATAAACTTGGTACAAGGATGAAGGATCTAGAGCTGTCAAAACTCAAAAGTCAAAACAGCACAACCC AGTCCACTCAGCCCTGGCCCAGATGGGTTAGGACAAAAAAGCTCACACGTGAGGAAAAACCCTCAAAGTCCTACGGGTTA AGGCTCACACGTGGGCCTTATATTTGACAAAAACTTAATCTTAATTAAACATGTTGACCTTGACAAAAAAATAAATATGT TGACCTAGCGCACTGTATGGACCTGCCCACCCATGGGGATTTAATGGTTTAATTAGTTATTATTTACATAGTTTGTTTAG CTTTTCAATTACCGTATGATTTCTGCCTTAGTAAGCATTTGAACTGGTCTCATTATATGATAGTTGTGAGCAGAGCAGTG ACTAGATTTAGATTGGAAATAACTCTCTATCGCCAGTATTTGGATTATTACCTCTGAAAAAAGCATTTGAAAAAGAAACA AAAACAGTAGAGTTGCTGTAATATAGCTTAGTCTCTCAGCTTCACTGAGCACCTATTTCTAAATAGCATTTGAAATTTGG ATATGTTTTTGAGGTAAGTGTTGAATTATCTCTAGGCTGCACAGTCTTCATTGATCTTCGTTGTAATTTTGCATGTAGCT AGTAGCAACTGATGGTTGGTAATGTCAGAGAATGGTGTATGGCTGTAAATGTAACATTATTTTTTGTTTAATGTTAAAGC TTGAATAATGGAACTTCCAAATTTCATGTTATGCAGGATCTTTCCGGGGAGGTCGCAGAAATCTTAGAGGCGACGGCAAG AGGCCGCATTCTATGCCTAATGCTAATGTGCGTTCAGAAATCAAAGATATGGATCAAATTCGAAAGGAGAGGCAGAACAA GGCTAGCAGAATTGCTCATATGAAGACCAAATCACCCAAGGGTAGGGGTAAGGGTAAGGATAAGGGGGGTAAGGGTATGG GGGGTAAGGGTAAGGGTATGGGGGGTAAGGGTAAAAACCCTGGCAGAAATGGAAAGAGAAAAGCCAAATAGAGGTTGTTT GAGGCTCCAGGAACATTTAGTCAAGGAAAGTAAAAAGGGGTTTCCATCAAAATTATGGTGTAAACCTTGTGTCTTAAAAG GGAAGTAAACTCAGTAAATTCCATCTAGATCTTTCCACTGTGAAACTCCCCTTTTTGTTTTTGATATTTTGCTTTTGATG GTGAGGGAGGGTTTTTGGTGTACTCATGGTGCAGTTTTGTTCAGTTTTGTTATCATGAAAAAATACAGAAAATTGTAATA TGCTATTAGTTGATTCTATTTCTAGCTCATGCAAATTTACTCATTTGTTCAGTTTTCATTCGTAATGTGTTTAGGATTGA AGAATCAATAATGATTCATAGACATAACTACATTAAAAACACCCCAAACACCCCTTTTTCCTACGGATTTGGCCAAATAA TACACTGAACTAACCACCTAAATACACATGACTAACTATAAAGCACATAACCTTGTAAAGTTGAAATTCCTAAATTAGGG ATTTGGCCAAATAATACACTGAACTAACCACCTAAATACACATGACTAACCATGAAGCATAGAACCGTGTAAAGTTGAAA TTCCTAAATTAGGGATTTGGCCAAATAATACACTGAACTAACCACCTAAATACACATGACTAACCATAAAGCACAAAACC GTGTAAACTTGAAATTCCTAAATTAGGGATTTGGCCAAATAATACACTGA
CDS sequence (LotjaGi3g1v0052800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCGTGAAGCGACCATGAAGAAGAAGAAGAACAACGCTAAGAAATCATGTGGATTCGAAACAATGAATCTGTGTCC CAACGTGTTCAGAGGAATCAAGCGCAAAGGCTACCAAGTTCCAACTCCAATTCAGCGGAAAACCATGCCCCTCATCCTCT CCGGCGCCGACGTTGTTGCCATGGCTCGTACTGGTTCCGGCAAAACGGCGGCGTTTCTGCTTCCTATGCTTCACCGGCTC AACCAGCATCTTCCTCAGGGTGGTGTTAGAGGACTCATTTTGTCGCCTACTAGGGATTTGGCGCTTCAAACTCTCAAGTT TACTCAGGAGCTTGGACGGTTCACTGACCTTCGTGTAAGTTTGTTAGTTGGAGGTGATAGTATGGAAGCTCAGTTTGAGG AGTTAGCTCAGAGTCCGGATATTATAATTGCCACTCCTGGTAGGCTTATGCACCATTTGTCTGAGGTGGATGATATGAGC TTGCGTACCGTGGAGTATGTTGTTTTTGACGAGGCTGATTGTTTATTTGGAATGGGTTTTGCGGAGCAGTTGCACAAGAT TCTTGCTCAGCTTGGTGAGAACCGTCAGACCTTGCTTTTCAGTGCTACATTACCCAGTGCACTTGCTGAATTTGCCAAGG CTGGTTTGCGAGACCCTCAGCTTGTCAGGCTGGACTTGGAGACTAGAATTAGCCCTGACTTGAAGCTTGCCTTCTTCACT TTGAGGCAGGAAGAGAAGAATGCTGTGTTGCTCTATTTGATCAGGGAGCATATTCGTTCTGATGAGCAGACATTGATTTT TGTGTCCACGAAACACCATGTGGAGTTTCTCAACATGTTGTTCCGGGCAGAGGGTATTGAGCCCTCTGTATGTTATGGCG ACATGGATCAAGATGCTCGCAAAATCCATGTATCAAGGTTTAGGTCAAGAAAGACAATGTTGTTGATTGTGACAGATATT GCAGCTCGAGGCATTGATATTCCACTCCTTGATAATGTTATCAATTGGGACTTTCCTCCAAAGCCTAAAATATTTGTCCA TCGAGTTGGAAGGGCTGCAAGGGCTGGTCGTACTGGTACAGCGTATTCTTTTGTGACTACAGAGGATATGGCCTACCTTT TGGATCTTCATTTGTTCCTCTCAAAACCAGTCAAAGCTGCTCCCACCGAAGAAGAGTTCTTTCAGGATATGGATGGAGTA AGGTCAAGAAATGATCAGGCACTGGCTAATGGAGTAACCATTTATGGTCGTTTGCCCCAAAAGATCATTGACCTTGTTTC AGACAGAGTTAGGGAAGTGATTGATAATTCTGCAGAACTGGAACTACTGCAGAGAACCTGTAAAAATGCATTTCGTTTAT ATACAAAGACAAAACCCTTACCCTCGAAGGAGTCCATTAGAAGAGTGAAGGATTTGCCCTGTGAGGGATTGCATCCAATT TTCTATAATGTGTTGGAAACAGGGGAGTTAATGGCTCTTGCATTTTCTGAGAATTTGAAAAAGTTTAGGGGAAAGCAAAC CATTTTGGAAACTGAAGGGGAAGCAGCTAAATCAAAGCATCGAAAGGGGCCTTCTGGCCAATGGGTTGATGTGATGAAAA GGAAAAGAGCCATTCATGAGAATATTATAAATTTGGTTCGTGAACAGAATTCTAAGAAAAATATGGAGAAGGAGGAGGAG GAAGTTGAATCAGAAATCACTCCTTTGGGGAAAGGAAGAAAAGCAACAAGTGGTCTTAAGAGAAAGGCCGAAAGTTTCAA GGATGATGAAAACTATATAAGTTCAATACCTAAAAATCAACACATGGAGGCAGGCCTTTCGGTAAAAGCTAATGAAGACT TTGGTTCAAATAGATTGGAAGCAGCTGTCCTAGATCTGGTTGCAGATGATGGTTCTGGCATTCAGAAACAAAGATCTCAA TATCACTGGGATAAGAGGGGTAAAAAGTACATCAAGTTAAACAATAATGACCGTGTTGCTGCAAATGGAAAGATAAAGAC AGAGAGTGGTGCAAAAACGAATGCCACCAAGACTGGTATATATAAAAAGTGGAAAGAACGCTCACACAATAAGGTATCTC TTAGAGGGACCAATACTGATGGTGAAGCTCATGGGTCCTCAAGTTTCTCAGGATCTTTCCGGGGAGGTCGCAGAAATCTT AGAGGCGACGGCAAGAGGCCGCATTCTATGCCTAATGCTAATGTGCGTTCAGAAATCAAAGATATGGATCAAATTCGAAA GGAGAGGCAGAACAAGGCTAGCAGAATTGCTCATATGAAGACCAAATCACCCAAGGGTAGGGGTAAGGGTAAGGATAAGG GGGGTAAGGGTATGGGGGGTAAGGGTAAGGGTATGGGGGGTAAGGGTAAAAACCCTGGCAGAAATGGAAAGAGAAAAGCC AAATAG
Protein sequence (LotjaGi3g1v0052800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTREATMKKKKNNAKKSCGFETMNLCPNVFRGIKRKGYQVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLLPMLHRL NQHLPQGGVRGLILSPTRDLALQTLKFTQELGRFTDLRVSLLVGGDSMEAQFEELAQSPDIIIATPGRLMHHLSEVDDMS LRTVEYVVFDEADCLFGMGFAEQLHKILAQLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLAFFT LRQEEKNAVLLYLIREHIRSDEQTLIFVSTKHHVEFLNMLFRAEGIEPSVCYGDMDQDARKIHVSRFRSRKTMLLIVTDI AARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAYSFVTTEDMAYLLDLHLFLSKPVKAAPTEEEFFQDMDGV RSRNDQALANGVTIYGRLPQKIIDLVSDRVREVIDNSAELELLQRTCKNAFRLYTKTKPLPSKESIRRVKDLPCEGLHPI FYNVLETGELMALAFSENLKKFRGKQTILETEGEAAKSKHRKGPSGQWVDVMKRKRAIHENIINLVREQNSKKNMEKEEE EVESEITPLGKGRKATSGLKRKAESFKDDENYISSIPKNQHMEAGLSVKANEDFGSNRLEAAVLDLVADDGSGIQKQRSQ YHWDKRGKKYIKLNNNDRVAANGKIKTESGAKTNATKTGIYKKWKERSHNKVSLRGTNTDGEAHGSSSFSGSFRGGRRNL RGDGKRPHSMPNANVRSEIKDMDQIRKERQNKASRIAHMKTKSPKGRGKGKDKGGKGMGGKGKGMGGKGKNPGRNGKRKA K
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 224 | 224 | 2.3E-75 | – | |
| ProSiteProfiles | 18 | 46 | 29 | 10.177 | ||
| CDD | 19 | 223 | 205 | 6.5847E-133 | – | |
| SMART | 37 | 244 | 208 | 1.6E-56 | ||
| PANTHER | 37 | 689 | 653 | 1.9E-115 | ||
| PANTHER | 37 | 689 | 653 | 1.9E-115 | – | |
| Pfam | 42 | 209 | 168 | 1.9E-47 | ||
| ProSiteProfiles | 49 | 222 | 174 | 31.163 | ||
| SUPERFAMILY | 88 | 374 | 287 | 1.04E-67 | ||
| ProSiteProfiles | 233 | 395 | 163 | 19.138 | ||
| Gene3D | 237 | 458 | 222 | 3.3E-41 | – | |
| CDD | 241 | 365 | 125 | 2.23508E-45 | – | |
| Pfam | 246 | 356 | 111 | 1.5E-23 | ||
| SMART | 275 | 356 | 82 | 8.3E-22 | ||
| Coils | 543 | 565 | 23 | - | – | |
| MobiDBLite | 552 | 582 | 31 | - | – | |
| MobiDBLite | 552 | 568 | 17 | - | – | |
| SMART | 625 | 687 | 63 | 3.6E-23 | ||
| Pfam | 625 | 686 | 62 | 1.3E-13 | ||
| MobiDBLite | 687 | 801 | 115 | - | – | |
| MobiDBLite | 694 | 714 | 21 | - | – | |
| MobiDBLite | 739 | 755 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | RNA helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi3g1v0052800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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