Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0055200 |
| Transcript ID | LotjaGi3g1v0055200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Organic cation/carnitine transporter; TAIR: AT1G16390.1 organic cation/carnitine transporter 3; Swiss-Prot: sp|Q9SA38|OCT3_ARATH Organic cation/carnitine transporter 3; TrEMBL-Plants: tr|A0A072UJG0|A0A072UJG0_MEDTR Organic cation/carnitine transporter; Found in the gene: LotjaGi3g1v0055200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5753419..5763104) extracted from Lotus japonicus Gifu genome v1.2.
GTGGAATCACGGGACAAAACTTTCAAGTACCGAAAAATAGTCTTTAACACGTTGCACGTGACACCTGTCTAAACCTCAGA TAAAACCATCAGTGATACATCCATTTCAATGCGCACGCAGAAACTAGTGTTGTCTGCATCAACCTTTTAACTCAAAACAC AAACACCAAACTCAACTCAAACACAACACCAACAACAACAACATCATCATCATCATCTGTCTTGCAAGCTCAATATTCCA TTAATGGCCTCCATAGAAGAATTACCCTCCATGCGTCAAGCTTCTTTTGAGGTACCTTGCTCTCTCTTAATGCAAATCTC ACTCTTTATGCATGTTGCTTATTACTGTGATTGATGATACCTGTTTGCACTTAGTCTTGATTCAACTTTTTTGTATTATT TTAAACCCTCCCTTCCATTCCAGTTTCCACATATCTTACCAAGACCCTAACCTTGCTGTATTATATTAATATATTCTTAA TTTTTAATCCTGCATCATGCATCACATTCCATTTTTTTAATACCATAGATAATAGTATATTTCTTGTTCTCTGGTTTCCC CTTTTTTATATTTAATTTAGGTTAGATTAGTTGAATGCAAGTAGATTAGTAGATAGAGTAGCACGTTCAATTTCAAAGTC AACCACGCGTCGGCCACATGGTGATTAATTTCAGTGTGAATCAATCTCTCAGAAAAATATTTTAAAAAATGGACACATCA CGCAATTTGAGCCACAATATTTGGTACTAAAGCTTAAAATATTAGTAGTAGTTGGAATGTGAATGCTAAGTTAGCTAGTT GGCATTAGATTTTAGTACCCAGATTTGAATTTTATTCCTATATAACTTGAAGCACCACTATACAATAGTAGTACAATACA ATACTCACATTTTCATCTTCAGAAATTGGAAATTCTCTCTGTTTTCAGCTATCAAAGAGAATTTCCAATGGAGGGTTCAG TTCCAATTTTAACAAATTCTGATTCTGTTGAGCAGGAAAAATTGATTCCCTTCTCTGATGATGACATGATAGAGAGGGGT CTGGGGAGGTTTGGGTGGATGGAGTTTCTGCAATGCATACTTGTGTCGTTCGCAATGTTCTTCGATGCGCAACAATCATT CATCACCATCTACACTGATGACTACCCAACATGGCATTGCAACGATGGTGCCGCCGCGTGCAGCGCTGGTTCTGAAATCT GCAAGCTGCCAAGGTCTTCTTGGTCTTGGGATGGACCCGCTCACAAGACAACTATATCACAATGGGGGCTTGAATGTGCT AGCAACTTCGTCACAGGTTTACCGCAATCTTCTTTCTTCATGGGTTGTCTTATTGGTTCGTTTGTTTTAGCTACATTGGC TGATACATCTCTTGGAAGAAAGAACATGCTTGTCCTGTCTTGTTTGTCAATGTCTGTAACTTCAATGCTGGCTGTCTTCA CCACCAATGTTTGGGCTTACTCAGCTTTAAAATTCGTGATTGGGTTTTTGCGTTCGTCGATCGGGACGTGTGTTCTGGTG TTACTGACAGAGAAGGTGAGCACAGAGTGGAGGTTCACAGTGGGGATAGTAGAATATTTCTGCTTCACATTGGGGTATAT GTCCTTGCCTGGTATAGCTTATATCAATAGAAATGCTTCATGGAAAACTAATTACATTTGGACATCGGTTCCTGCTATTT GTTACTCAATCATTGCTTACCTATTTGTTACCGAGTCCCCGAGGTGGCTTCTGATGCAAGGTAGACAGGAAGAAGCCATG GCAATGCTTAAGGGAGTTTCTTCAGTGGAAAATGGTGTTGATTTAACTGCAAGCCTTCTAAAAGTGCCTGCTAAACAAAA GGGTTCAGTTTTCCAACTCTACTCATCAATAGCAGAGCTGTTTGGGAGATCTTGGGCTCTCAAAAGAATGGTGGCGATTA TGGTGCTTGGTATTGGAATTGGAATGGTGTATTTTGGCATGCCTTTAGCTGTGGGGAACTTGGGATTCGACATTTACTTG GCTGTTGTGTTTAATGCCTTGATGGAAATACCATCTTGTGTGGCCACTTATTTCTTGGAGAACTGCAGTAGAAAGCCATC TATTCTTGTGTTCTCTGTTGGAAGTGGGATATGCTGTGTGATGTGTGTTCTGGTTGGAAGCGAGCTACAAGCAGTTAAGG TGGCGCTGGCGATGGCATCATTTTTCAGTGCTTGCACAGCTTATAATGTGTTTCTGATATACATTATAGAGCTGTTTCCC ACAAGTGTGAGGAACACTACAACCTCACTTGTGAGACAAGCAATTGTGTTTGGTAACATTTTCAGCCCATTTTTGATATC TGCAGGGAGAAAGAATGACATTTTCTCTTATGGTGTATTTGGGATCGTTATAATGGCCTCATGTTTCACATTGCTCGGTT TGCCGGAGACCAAAGGAATAGCTCTTTGTGATACCATGGATCAACAAGAGAAGAAGGACAGCAGACCTGGTTGAAATCTT TTTTCTATGTTTGTTGTAGGTTCATTGTGTTTGCTACTTGGTAGATAAAGTTCTTGATTTTCCTCAATTTTGAAGAGAGA AAAAGACTGAGATTTGTCTGTGTGTTTGCTTATGAGTCCACGAGTTCAAAATCACTTAAGTTTCAGAGAAGCAATGTCTC ATAGCTTGTAGCTAGACTCGATTTCATTGTTAATTTTGTCTCAATTATGAAGCAAAAATGGACATTTAGCTTGTGTTTAC TTTTACAGTTTTACTAGTCCATTCGTTGAGGAGCTATGTCTGCTAACTTATACTGTACTAGCTTAATGCTATTTCTCTCT TTTGAAATGAATGCTCTTTCCTCATTCATCAACCCTTCTGAAAAGTAGTATTTTCTTAGGTGACCTCTAATTTTTTTAAC CTGTTATAACAGGTCAATACATCTTTTTTTAAAAAAATTTAATATATGATAAATTTTTAATAATATTTTTTCTTAAAAAT AATAATGTGTTGACCTTCTATACCCGATCAAAGTAGGTGGTGTAATTTTACACCACCTAAAAATGGTGCATATTAGGTTC TCCCATTTTCTTAATGAATGGGAATTAAATTCAAACCACATGCTTAGAAGTGTTGAGCCCCGAGCCCCTTTTGCTTTTGT TCTAAACCAAGTGGACTTAAACTTAATTATTGTAATAGAAATATAGAATTGAAAAATTACAAGAGAGAAGATGGCGTGAA TGAACCAAAGTTAAAAATACATTATTCACCTCCAAATTCACATTCACATGAAGATAAATTATATCACATTAAAATAAAAT AAAAATATACGAATTCATAATGGGTAAAAACTAAATCAAAGACAAATGGGAAAAAATGTACAAAGTTGTGAACATATGGC TTGAATGAACATATTTAGAACGCCAATATTTTAAAGAATTTATTTGTGTTTCTTATATCACAAGTACTTGTGCAAGAGTT TGGGTAAATTTATAAAAATAACTTATAACCTACTTGTTCTTCTTGAGATTAGACCTTCGATAGTTTTCGCGGTCTCAACG GTAGAGCACAACCAAAAGACAGAGTGATAGTATTGCAGTTATAGGCCTCAGGAGTACCTGCATAAGGCATTCCAACGCTT AAGTAGATGTATGAGTGAGGAGGATGCAAAAGTTTTAGAAGAACTCAAGGCCAAATGCTACCCATAAATTATGTAAATGA ATGACTCATTACAACATTTTTTTATTACTTTTCACAGCTGTTCGAAAGTGTAGTCACAGACACAAAAATATTTTTCAAGC TTTACGTACATAAGAGTTTTTTATGGTCTCATGTTCCGGCGTTACCTATCCCCTTTGGTAACAGTTTCTCGTAATTTATA GTAACAGTTATGTGGGAAAATGTTACATATTGCGCGAAAAATGCAATAATTACCACATAATAATTGTTCTCTATTATTAT TCGATAGGGAACACTTATTAAGTGTTGTAAAAAATATGTTGCCTAGAATGAAAGAGTGTGGTAGAAAGAAAGTGACAAAA ATAAGTGTCATTAGCTTTTCTCAAATTAGTAGTGGATGGTTGTTAATACAATTTTTGTGACTTCCTAAATTATATGAAAT TCATCATTATTTCTGGTTTTAGTTGATAAATTTACAGTCTTTCATAGCTAATTCCTAAACTTTTAACTCCTTAATTCATA TGTCAGCTAACTTCTACAACATGAGATTTCATTCGGGGTCATTTACTATCAAGGGACATATATAAATTTTAACTGATAAA AAATAAGTGTTATAAAGATATAACAAAAAATGAGTGTGAGTGACGCTTGTCAACCATACACCACAAACCAGCTAGTTTCT TTCTATTGCATGCAGATGCATGTGTGGGTGATGCAGATCCAAATAATTAGGCGGTCAATCACTATCGGTGCGGCAACTTG AGAATGGGCTATAATAGTGTTGAAACAAGACATTCAATTCAATTAAATTCATTGCATTAACATCATGGTGTGGGAAGGTA GATACTAGATAGATAGGTACACATCAGAGAAAATAACAAATTCTCGAGATTAAAGTGAATCCAAAAAGGTCCCACTCAAA TATTTGAAATTTTCATTTTATCATTCACTGCCCCCATTGCTTGGCCATTACTTTTGTAATTGGTCATCTCTCCTGGTTCC ACCCAACCAATTTATGTTTCTATTAAAAGTGAAGATCAAACACGCTGAACTAGTTGGGGGATAATTTATTTTCAGAAAGG GAAAAGAGTTTAAGCAGATATTGAGAAGGTTGAGCAATAAAAGGCTATTAAGGAGTGAGAATGTGAGATGATGATGATCA TTTGAAAGAAGTACGTGTGAACTCAAGAACGTGACGGTTAGATTTTGATGGCGGCGATTGAGGAGGTTGCCAATTCCACA CGGCTCGCGGTAGATGAGGCCAAAGCAGCTGCTGGTGGTGATGTATGTAATCTCTATCTCAATCTTTATTTGTCTTTTGA ATTGTTTACAATGTTGCTTGTTATTTATTGGAAATGCATTGAAAATGGAATGATTAGAAAATGGGGAGTGGATATATTTT CTTTTTCATAGAGTATAATTTCACCGGAAAGGTGAGAAATTAATCTCTTGGGTACGTACTGTCAGGAATAAAGTGAAAAT TCTTCCGATCATGTTTGTTCATACACATAAATTTAGGGGTTGAGCTCAAGATCACATACTTAGGGGACTTGTAAGTCTTC AGTTTACACCGGCATATTGATAAGGAAATGGATATATTAGAACCCTAATTGAATTACAATCTTATACGGAAAGAATAATT TTTAGTTAGTTGAATTATAATTTGTTTGAATGTAGCTTGTTAATGGAAATGCTACATGGTCCTAATTGAAGTAGAATATT TTTTTTTTTGAAAAATTGAAGTAGAATATTGAGTACACACTTATTTGAGTTATTTCAGTGTAGTTTATTAGTGTAGACAT TGAGAGTGGAAAGGGAAAGAAGTGAAAGAAATAGCGAGTTTTGAATATACTTTTTAAAAATCGTTTTTAATTTGTTTGTT ATAATCTGTTTTCAATTTATTATTATCAGTTTTTTAAAAATAAATAACAGAAGATGGTTTTAGTTTTTAAATTATAGTAT ATTTTATGTCGGAAAGATAAATTACATTATTCAATGATTGATCGATCCTTTGGACATTCCCTCTCGGACCTATATTTCCC ATTTTTTTAATATTGGAAAACATCTTATTCAAACATTTTTTTCTTAAAAAATAATTTTTAAAAACTGTTTTTAAATATAG AAAACTAAATTGCAATTAAAAAAAGCTCGTATTAAATATAATATAATATAATGTGATAAGAAGTGAGTGATAGAAAGAAA AATTGTGTATAAATTTTTTGGATTGTTTGGCATTTACATATAGGGGTGGAAATAGGTCAGGCAGCTCGTCAGGGGCCTAT GGCTTGACTCGTTAGAGGCTCGGCTCGGCTCAGCTCGTTTATTAAAAAGGTCAGGCTTAGGCTTTTTTAAAAGCTTGTTT AACTAAAAAGGTCATGCCCAAACTATTAAAAAAATCTATTTGGCCTAACAGGCCGGCCTATTTATATATTATTTTTATTA ATAATATAAATAAATATAATATAATAATATATTATTTGATTTTTTTAAACTGATGTATACTTTAGTATAAAAGAAAACCC TAAGTCCCTACCATAACCTAGATTAGAAACGTTCCAGACATATTCAATGATACAGGTGTAGTTTTTGAAATGCAACGATA CAGGTTTTTTTATTTGAAAAGAAAGTGCAATGATATATAAAAGGCTTATTAGCCCGCAAGCCAAATAGCCTTCTTTTGAT AAAATTGTCTGTTAAATAGGCTTTTAAGCAGGCTTGTAGGCCAGGCCAGGCCTTAGAAAATGCCAGGCCAAGCCATAAAA TTTGGCCTATTGATAGGCCACAGGCCAGGCTTGGGCCACGAAAAGATAATGCAGGTCAGGCCTAGGCCGCACAAAGCTTG ACTCGGCTCGGCCTATTTTCACCCCTATTTACGTATGATAATTGTAATTGAACTCATCACTAATTCATGGAATATCGCTC ATTTTTATATGTATTACTAAGTTTATTGTATTGAAACTTTGTCTCTAACTTTTTTTTTTATAGACTAGGGTTAGTAATCT CTCTATCTTTATCTTTCTGAATCTGACATTCTCACTATACATGAATGAGTAATTGTAATGCTGGCACAAGCAGGATTCTT TAATGATGGACAAAGTAGGCTTGTTGGCAATTTCACCGACTAGCTTTCTGCATCTCATTAAATTCGGAGTCATGGCACCT GGCCTCATGGGCACATGCATTTCATTGCATTTACTACTTTTTGTCCTGATAATATTGTTTTTAATTGCATTCTTGATAAA GATAGTTGACGATATGATCCAAATTCAATCATGCTTTCCAATTTTAGTAAAGATAGTTGAGCCCATTAAAGATATATCCC GTTCTGATCTAAATTAATGCGTGTAGAAAATTACGGTCAAATTAAAATTACAGTAGATATAAATAATTTAGAGTAACTTA ATGTGTTTTTGACTTTACTCTAATTTTTCACTAGATATCCATACATACACTTAAAGTTGTGTGTATTAAAGTTGCCGAGG TTCCTGTTAATTTGCCTCTCATTTCAACAACTAATTAACGGGTTGTTTGGATGCTCATTTATAAGCATTGGAATTTATTT TGTACTCTTAAAATTAATTTTTTGGAATTTAGATCTATCGTTTCACAATTGATTCTTACTTCAAAATCAATTTTATGATA AATTATTAAGCCTAGCTTCTGCAGCATATCCTAATTATTGTGAGATCTCACATTGAGATTTATAAAAATCACTTCTCTTT GTGTGTAAATCATCTAGTATCAGATTATCATATCTCGATTAGGCCTTTCAAAAAAAAAATTCGATTATTCCGGATTCATG ATTCAATAAGAGTTAACAGCTCTTCACCCACACACTTTGCTTGTATTGTCAACTGAGTTAACCCTGGTGGATTCTCCTAA ATATATATAAACAAAAATCATTTCATCAATTAACTCACTTTTTTAATATTCAATTTTTTTTAGCAATAATCATATATCAA TTTTGAGCTATGATTCATTCAAACTCATAACATTTTTCACTTTATTTTCTATCAATTTCCTCTTCTCTCCCATCCGTATG GAACTTTTTCCATCACTTTTAAACTAATTTTCATGTTGATTTCAACTTTATGTAACATGCTTTAAGACAACTTAGCTAAA AGTTGTAAATGAAGTCACGCTCCTTCTCATAACCCTCTGCCTCTAGTAAGCAGTAACAAGAAAATACAGGATTGAAATGG AAGATTCAGTTCCAGTTTTAACAAAAACTTATTATTTTGCTGAGCAGGAACAATTGGAATATGACATGATGGAGAAGGGT TTGGGAACATTTGGCTGCGCGGAGTTCATGCAATGCATCCTTGTATCCTTAGCAATGTTTTTTGATGCACAACAATCATT CATAAGCATCTACACTGATGACTACCCATCATGGCACTGCACTGATTTCACCACATGCAGCCCAGGTTCCAACATCTGCA ACATCCCAAAATCTTCATGGTCTTGGGATGGACCAATTCACAAGACAGTGGTATCCCAATGGGGCCTTGAATGTGCAAGT GACTTTGTCATAGGTTTACCCCAATCTTGCTTCTTCATTGGTTGCCTCCTTGGTTCATTTCTCTTAGCAACATTAGCTGA TACATCTCTTGGAAGAAAGAACATGCTCATTCTGTCTTGTTTAGCAATGTCAGTAACTTCAATCATCATTGTCTTCTCCA CCAATGTTTGGATTTACTCAGCTTTCAAATTCTTGATTGGGTTTTGGCGTTCGACGATCGGAACATGTGTTCTGGTTTTA CTGACAGAGAAGGTGAGCACAGAGTGGAGGTTCACAGTGGGGATTGTAGAATATTTCTGCTTCACTATAGGGTATATGTC CTTGCCCGGTATAGCTTATGTCAATAGATTTTCGTCATGGAAAGCTAATTACATTTGGACATCGATTCCTGCGATTGTTT ACTCAATCATAGCTTACATTTTTGTTACTGAGTCTCCAAGGTGGCTTCTCATGCAAGGTAGACAGGAAGAAGCAATAGCA ATGCTGAAAGGAGTGTCCGCAGCAGAAAACGGGGTTGATTTAACTGCAAGTTTACTAAAAGCGCCGCCTCCCCCAAAGGC TTCAATTTTCCAACTTTACTCATCAATAGCAGAGTTGTTTGAGAGAAGTTGGGCTCTAAAGCGAATGGTGGCGATTATGG TGCTTGGTATTGGCATTGGAATGGTGTATTTTGGAATGCCACTGGCTGTGGGGAACTTGGGATTTGATATTTACTTGGCT GTTGTGTTCAATGCCTTGATGGAATTTCCTTCTTGTGTTGCAACATATTTCTTGGAAAATTGCAGGAGAAAGCCATCTAT TCTTGTATTCTCAGTTGCAAGTGGAGTATGTTGTGTAATGTGTGTTCTTGTGGGAAGTGGGCTACAAGAAGTTAAAGTTG GTCTAGCATTGATTTCATTTTTCAGTGCTTGCACAGCTTATAATGTGTTTCTGATATACATTATAGAGTTGTTTCCTACA AGTGTGAGGAACACTACAACTTCATTGGTGAGACAAGCTATTGTGTTTGGTAACATATTCAGCCCCTTTTTGATATCTGC AGGGAGGAAAAATGACTTCTTCTCTTATGGTGTATTTGGAATAGTAATAATGGCATCTTGTATTACATTGCTCGGTTTGC CGGAGACCAGAGGACAAGCTCTTTGTGATACCATGGATCAACAAGAGAAAAAAGAACATTCACCTGTGTAGAATTGGCAA CAGGGTCAGTTTATGATTGATTAGGTTCTTTGTGTTTCGCTGCATTGGCTGGTAAAGATCATGATTTTGCGGTTTTGACG CGAGAACCTGAGACTTGATTTTTGTCACGATTATAACTGAAGAAACTAGACCCCATTCAGTAATTTTTCTGTTATTCTGT TATGTTAGTTAACTTAGTTTTCTAGTGTAATGTATGGTGAAATGTAAAATGGGTACATGACTGCAAGTCTGCAACTTCTT GTTAAACAGTCTCATAATTAGGGTGCTTCTCTTGTCTGTGTTGTTAGTTGGAAGCAGTTCTTGGGCTCAAGCAATACCAA TGGCCC
CDS sequence (LotjaGi3g1v0055200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTCCATAGAAGAATTACCCTCCATGCGTCAAGCTTCTTTTGAGGAAAAATTGATTCCCTTCTCTGATGATGACAT GATAGAGAGGGGTCTGGGGAGGTTTGGGTGGATGGAGTTTCTGCAATGCATACTTGTGTCGTTCGCAATGTTCTTCGATG CGCAACAATCATTCATCACCATCTACACTGATGACTACCCAACATGGCATTGCAACGATGGTGCCGCCGCGTGCAGCGCT GGTTCTGAAATCTGCAAGCTGCCAAGGTCTTCTTGGTCTTGGGATGGACCCGCTCACAAGACAACTATATCACAATGGGG GCTTGAATGTGCTAGCAACTTCGTCACAGGTTTACCGCAATCTTCTTTCTTCATGGGTTGTCTTATTGGTTCGTTTGTTT TAGCTACATTGGCTGATACATCTCTTGGAAGAAAGAACATGCTTGTCCTGTCTTGTTTGTCAATGTCTGTAACTTCAATG CTGGCTGTCTTCACCACCAATGTTTGGGCTTACTCAGCTTTAAAATTCGTGATTGGGTTTTTGCGTTCGTCGATCGGGAC GTGTGTTCTGGTGTTACTGACAGAGAAGGTGAGCACAGAGTGGAGGTTCACAGTGGGGATTGTAGAATATTTCTGCTTCA CTATAGGGTATATGTCCTTGCCCGGTATAGCTTATGTCAATAGATTTTCGTCATGGAAAGCTAATTACATTTGGACATCG ATTCCTGCGATTGTTTACTCAATCATAGCTTACATTTTTGTTACTGAGTCTCCAAGGTGGCTTCTCATGCAAGGTAGACA GGAAGAAGCAATAGCAATGCTGAAAGGAGTGTCCGCAGCAGAAAACGGGGTTGATTTAACTGCAAGTTTACTAAAAGCGC CGCCTCCCCCAAAGGCTTCAATTTTCCAACTTTACTCATCAATAGCAGAGTTGTTTGAGAGAAGTTGGGCTCTAAAGCGA ATGGTGGCGATTATGGTGCTTGGTATTGGCATTGGAATGGTGTATTTTGGAATGCCACTGGCTGTGGGGAACTTGGGATT TGATATTTACTTGGCTGTTGTGTTCAATGCCTTGATGGAATTTCCTTCTTGTGTTGCAACATATTTCTTGGAAAATTGCA GGAGAAAGCCATCTATTCTTGTATTCTCAGTTGCAAGTGGAGTATGTTGTGTAATGTGTGTTCTTGTGGGAAGTGGGCTA CAAGAAGTTAAAGTTGGTCTAGCATTGATTTCATTTTTCAGTGCTTGCACAGCTTATAATGTGTTTCTGATATACATTAT AGAGTTGTTTCCTACAAGTGTGAGGAACACTACAACTTCATTGGTGAGACAAGCTATTGTGTTTGGTAACATATTCAGCC CCTTTTTGATATCTGCAGGGAGGAAAAATGACTTCTTCTCTTATGGTGTATTTGGAATAGTAATAATGGCATCTTGTATT ACATTGCTCGGTTTGCCGGAGACCAGAGGACAAGCTCTTTGTGATACCATGGATCAACAAGAGAAAAAAGAACATTCACC TGTGTAG
Protein sequence (LotjaGi3g1v0055200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASIEELPSMRQASFEEKLIPFSDDDMIERGLGRFGWMEFLQCILVSFAMFFDAQQSFITIYTDDYPTWHCNDGAAACSA GSEICKLPRSSWSWDGPAHKTTISQWGLECASNFVTGLPQSSFFMGCLIGSFVLATLADTSLGRKNMLVLSCLSMSVTSM LAVFTTNVWAYSALKFVIGFLRSSIGTCVLVLLTEKVSTEWRFTVGIVEYFCFTIGYMSLPGIAYVNRFSSWKANYIWTS IPAIVYSIIAYIFVTESPRWLLMQGRQEEAIAMLKGVSAAENGVDLTASLLKAPPPPKASIFQLYSSIAELFERSWALKR MVAIMVLGIGIGMVYFGMPLAVGNLGFDIYLAVVFNALMEFPSCVATYFLENCRRKPSILVFSVASGVCCVMCVLVGSGL QEVKVGLALISFFSACTAYNVFLIYIIELFPTSVRNTTTSLVRQAIVFGNIFSPFLISAGRKNDFFSYGVFGIVIMASCI TLLGLPETRGQALCDTMDQQEKKEHSPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | - | – | |
| PANTHER | 15 | 504 | 490 | 4.6E-242 | – | |
| PANTHER | 15 | 504 | 490 | 4.6E-242 | – | |
| Gene3D | 34 | 503 | 470 | 3.9E-53 | – | |
| Phobius | 35 | 52 | 18 | - | – | |
| ProSiteProfiles | 42 | 489 | 448 | 14.334 | ||
| Phobius | 53 | 121 | 69 | - | – | |
| CDD | 82 | 486 | 405 | 3.76842E-145 | – | |
| SUPERFAMILY | 105 | 493 | 389 | 6.15E-39 | ||
| Pfam | 108 | 493 | 386 | 4.0E-26 | ||
| TMHMM | 115 | 137 | 23 | - | – | |
| Phobius | 122 | 140 | 19 | - | – | |
| Phobius | 141 | 146 | 6 | - | – | |
| Phobius | 147 | 170 | 24 | - | – | |
| TMHMM | 149 | 171 | 23 | - | – | |
| Phobius | 171 | 175 | 5 | - | – | |
| Phobius | 176 | 193 | 18 | - | – | |
| TMHMM | 176 | 193 | 18 | - | – | |
| Phobius | 194 | 204 | 11 | - | – | |
| Phobius | 205 | 224 | 20 | - | – | |
| TMHMM | 205 | 227 | 23 | - | – | |
| Phobius | 225 | 235 | 11 | - | – | |
| Phobius | 236 | 254 | 19 | - | – | |
| TMHMM | 237 | 254 | 18 | - | – | |
| Phobius | 255 | 321 | 67 | - | – | |
| Phobius | 322 | 343 | 22 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 344 | 348 | 5 | - | – | |
| Phobius | 349 | 370 | 22 | - | – | |
| TMHMM | 349 | 371 | 23 | - | – | |
| Phobius | 371 | 378 | 8 | - | – | |
| TMHMM | 378 | 400 | 23 | - | – | |
| Phobius | 379 | 400 | 22 | - | – | |
| Phobius | 401 | 405 | 5 | - | – | |
| TMHMM | 405 | 427 | 23 | - | – | |
| Phobius | 406 | 429 | 24 | - | – | |
| Phobius | 430 | 440 | 11 | - | – | |
| TMHMM | 440 | 459 | 20 | - | – | |
| Phobius | 441 | 459 | 19 | - | – | |
| Phobius | 460 | 464 | 5 | - | – | |
| TMHMM | 464 | 486 | 23 | - | – | |
| Phobius | 465 | 485 | 21 | - | – | |
| Phobius | 486 | 508 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0055200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…