Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0055800 |
| Transcript ID | LotjaGi3g1v0055800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT1G16380.1 Cation/hydrogen exchanger family protein; Swiss-Prot: sp|Q9SA37|CHX1_ARATH Cation/H(+) antiporter 1; TrEMBL-Plants: tr|I1LVH1|I1LVH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5864260..5867414) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGGGACCATGTGTCATGTTACGAGTCTTCTTCCACCAACAATTGAGGATCTGAAACACACGCTTCATCATTCCAACA TGCAAAAGAATTGTTAGAACATAGAAGGTGTTTTCAACTGCTTCTCCAACATTTGATTTCTGCAATTTTTTCACAAACAA GGGAAGCACAATGGACGCCACTCACACAATGTTTTGTGACAATGATCTGGTTAACCCTCTAAGCTCCATGGGCATGCAAG TTTCCTGCATTCTTGTTGTCTCACACGTCTTCAACGTGGTGCTTAGAACAGTTGGTCAACCTGGACCCATTGCACAAATT CTGGTAATCAATCAATCAATTAATCACCTTAATTTTGTTAATTAAGTACATTTTTTGTATTGAATTATATTTTAATTAAT TCTTGGTGCATTGTTTAACAGGCAGGGTTGGTACTAGGTCCAATGTCTCATATAGAGTATATACAAGCAACATTTTTTCC TGCAAGTTCCATAAATTACTATGAAGTTGTGAGCTTTTTCTGTAGAATACATTTCATGTTCTTATTTGGGTTAGAGATGA ACATTCACTACACAATGCGCAATCTACGCTTGGTTAGCTTGGTAGCCTGTGGTGGTGCCCTAATGGGTGGTGTTTTTGGT CTATCTGTGTCCTTTTATTTGTATCAAGAGTTAGACACAGATGCCCCAATATATTATTTTTGTATGATTATTATGCTAGT GGTTTCATACACAAGCTCTCCCATGGTGATTCGTTTGGCAGCGGAATTGAGGTTTGCTGCATCGGGTATTGGGCGAATCG CGGTGTCCTCTGCACTGATTACAGAAATCGGTTGCTTGGTGTTCTTCAATGTGATGGTTAATTGGAAAAGAGAAAACCAC ATTTCAGCTGGTTTTGGTTGCATTATCATTACAGCCCTGGTGATTTTGATAAACAGGTACTTAGCTGTTTGGTTAAACAC ACGGAATCGGAACCAGAAGTACCTTAAGGCACCTGAGCTGTTACTCATCCTGTTTCTGCTTCTGGCGAGCTCAATGATTA TTGAGATTTGGGGTTACAATAGTATCATTAGTTGCTTCATCATTGGCTTGATGTTTCCTAAGGAAGGCAAAACGGCTAGA ACATTGGTGCATAAGCTTGGTTATTCTATTTATAACTTTGTGCTTCCAGTGTACTTTGGCTACTTGGGTTTGCAATGTGA CCTCATATATGTCTTCCGGAGCTTGAACCGGATGGCGAACACGGCCATATTGATCTTGTTGAGCATTGGCAGCAAGCTTG GAGGCACTCTTGTGGTTTGCCGTTCCCTTCGGATTCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGA GGTTATGCTGATCTGCTATTCATTGGTGCAGCAGCAAAGCAAATCATTGTGAGTATATTTCCTATAAATTGATTGGGTTA GGCTGTGTTTGGAAGAGCGTATTTGAGCTTATCTTATGACTTGTGCAAGTGCTTGGGCGAGCTTATGAAAATTGCTTATG ACCTACGTATTATCTGTTTTGAGCTTATTTTCATAAGCTGTTCATATTAACTAATGAATAAGTGTTTATACCTACTACCT ATAAGATATTTTGAACTCAAATTAGCTTATGGATAAGCTCTTCATAAAATTGTTTACCCAAATATACCCTTAATATGAAG TAGAATATAAAGTATATGATAATTAAGTGGCTCTTGTGTTGATTTGCAGACGTTTGATTCAGAGGCTTACAATGTGTTGT TAGTATCAATAGTTTTGAACACGATAATATCAGGAATAATTGTGGCTTTTCTAGCAAGGGGGGAAGAGAAAATGTTTGCA AACAACCACACTGCAATTGAGCCTCAGCAAATGGAGGATGAGCTTCGAATTCTTGCCTGTGTATATGATCCGCGTCAAGT ATCTGCTATACTCGCGACAGTGCTAGCAATGCACGGCACGAGAGCATCACCATCCACCACTTATTTGATGCACCTAATAG AGCTTGTGAAGAAGATCAAGTCTAACTTATTATACCATGAAAAAGAAAACGCTGACATTAGCGACGATGATGACTATGGT GGCAATGATGTTGTGGAAATCAATAATGCTTTAGATGCCTTCACTGCAGACACAGCGATTTTGGTCCACCAAAGAAGGGC AGTGTCTCCTTTCCCAAGTTTGTATGAAGATGTTTGCAATGAAGCAGAGGATCTTCAAGTGTCCATCATTCTACTTCCCT TCCACAAGCATCAGCGAATCGATGGAAAATTGGAAAGTGGGAAGGAAGGTATAAGGATTACCAATCAGAAGGTTCTTAGA CATGCTCCTTGTTCTGTTGGTGTCATTGTAGAAAGAGGACTTGCAAAGGTCCCTGGTTTCTCACAGTTAGTTGCATCTGA AGCCATACAAAATATTGCAACACTTTTCTTCGGAGGCCCGGATGATCGTGAAGCTATCGCTTGGAGCCTACGCATTTCCA AAAGCCCTCGAGTTAACTTAACGATCATCAGATTTCTGCTGTCTTCTTCTTCATCATCACAGAACGAACCAATTGAAAGT GGACAATCTGAGGACAAAGAAATTCTAATGTCCTTGTCTGGGGAAGAGACAGTGAATGAGATTGACAACACCTTTATGGT TGATTTCTATAATAGGTATGTAACCTCAGGCCAAATTGGATATGTGGAGAAGTTTGTGAAGGATGGAGCAGAAACAGTGG ACTCTTTGAAAGAGATAGGGGACATGTACTCTTTGTTTATAGTAGGAAAGGGTGGTAGAGGAAATAGTTCATTAACAATA GGTATGAGTGATTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCAGACTTTGATATTCATGG CTCAGTTTTGGTCATTCAACAGCATAGAGATGCCAAGAAAGGCCTAATGCACGATTAGCTATTATAAGTACAATTTAGAC TTGTTCATGTATCTACATTATGAAAATAGGTGTACAAAGGGAACAATTTTTTGTTTTTCAACAATGTATTGAAGAGAAAA AAAAATGCTATACATTTTTTATAACTTTGCATGTTAATCTCAGTTATTTTTAGTTTGAGATCTGTAAGGGAGTGATGGAA AATATGATTGTATTAATAAGAATTGTTGTTAAAAT
CDS sequence (LotjaGi3g1v0055800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGCCACTCACACAATGTTTTGTGACAATGATCTGGTTAACCCTCTAAGCTCCATGGGCATGCAAGTTTCCTGCAT TCTTGTTGTCTCACACGTCTTCAACGTGGTGCTTAGAACAGTTGGTCAACCTGGACCCATTGCACAAATTCTGGCAGGGT TGGTACTAGGTCCAATGTCTCATATAGAGTATATACAAGCAACATTTTTTCCTGCAAGTTCCATAAATTACTATGAAGTT GTGAGCTTTTTCTGTAGAATACATTTCATGTTCTTATTTGGGTTAGAGATGAACATTCACTACACAATGCGCAATCTACG CTTGGTTAGCTTGGTAGCCTGTGGTGGTGCCCTAATGGGTGGTGTTTTTGGTCTATCTGTGTCCTTTTATTTGTATCAAG AGTTAGACACAGATGCCCCAATATATTATTTTTGTATGATTATTATGCTAGTGGTTTCATACACAAGCTCTCCCATGGTG ATTCGTTTGGCAGCGGAATTGAGGTTTGCTGCATCGGGTATTGGGCGAATCGCGGTGTCCTCTGCACTGATTACAGAAAT CGGTTGCTTGGTGTTCTTCAATGTGATGGTTAATTGGAAAAGAGAAAACCACATTTCAGCTGGTTTTGGTTGCATTATCA TTACAGCCCTGGTGATTTTGATAAACAGGTACTTAGCTGTTTGGTTAAACACACGGAATCGGAACCAGAAGTACCTTAAG GCACCTGAGCTGTTACTCATCCTGTTTCTGCTTCTGGCGAGCTCAATGATTATTGAGATTTGGGGTTACAATAGTATCAT TAGTTGCTTCATCATTGGCTTGATGTTTCCTAAGGAAGGCAAAACGGCTAGAACATTGGTGCATAAGCTTGGTTATTCTA TTTATAACTTTGTGCTTCCAGTGTACTTTGGCTACTTGGGTTTGCAATGTGACCTCATATATGTCTTCCGGAGCTTGAAC CGGATGGCGAACACGGCCATATTGATCTTGTTGAGCATTGGCAGCAAGCTTGGAGGCACTCTTGTGGTTTGCCGTTCCCT TCGGATTCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCTGATCTGCTATTCATTGGTG CAGCAGCAAAGCAAATCATTACGTTTGATTCAGAGGCTTACAATGTGTTGTTAGTATCAATAGTTTTGAACACGATAATA TCAGGAATAATTGTGGCTTTTCTAGCAAGGGGGGAAGAGAAAATGTTTGCAAACAACCACACTGCAATTGAGCCTCAGCA AATGGAGGATGAGCTTCGAATTCTTGCCTGTGTATATGATCCGCGTCAAGTATCTGCTATACTCGCGACAGTGCTAGCAA TGCACGGCACGAGAGCATCACCATCCACCACTTATTTGATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCTAACTTA TTATACCATGAAAAAGAAAACGCTGACATTAGCGACGATGATGACTATGGTGGCAATGATGTTGTGGAAATCAATAATGC TTTAGATGCCTTCACTGCAGACACAGCGATTTTGGTCCACCAAAGAAGGGCAGTGTCTCCTTTCCCAAGTTTGTATGAAG ATGTTTGCAATGAAGCAGAGGATCTTCAAGTGTCCATCATTCTACTTCCCTTCCACAAGCATCAGCGAATCGATGGAAAA TTGGAAAGTGGGAAGGAAGGTATAAGGATTACCAATCAGAAGGTTCTTAGACATGCTCCTTGTTCTGTTGGTGTCATTGT AGAAAGAGGACTTGCAAAGGTCCCTGGTTTCTCACAGTTAGTTGCATCTGAAGCCATACAAAATATTGCAACACTTTTCT TCGGAGGCCCGGATGATCGTGAAGCTATCGCTTGGAGCCTACGCATTTCCAAAAGCCCTCGAGTTAACTTAACGATCATC AGATTTCTGCTGTCTTCTTCTTCATCATCACAGAACGAACCAATTGAAAGTGGACAATCTGAGGACAAAGAAATTCTAAT GTCCTTGTCTGGGGAAGAGACAGTGAATGAGATTGACAACACCTTTATGGTTGATTTCTATAATAGGTATGTAACCTCAG GCCAAATTGGATATGTGGAGAAGTTTGTGAAGGATGGAGCAGAAACAGTGGACTCTTTGAAAGAGATAGGGGACATGTAC TCTTTGTTTATAGTAGGAAAGGGTGGTAGAGGAAATAGTTCATTAACAATAGGTATGAGTGATTGGGAGGAGTGTCCAGA ACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCAGACTTTGATATTCATGGCTCAGTTTTGGTCATTCAACAGCATAGAG ATGCCAAGAAAGGCCTAATGCACGATTAG
Protein sequence (LotjaGi3g1v0055800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDATHTMFCDNDLVNPLSSMGMQVSCILVVSHVFNVVLRTVGQPGPIAQILAGLVLGPMSHIEYIQATFFPASSINYYEV VSFFCRIHFMFLFGLEMNIHYTMRNLRLVSLVACGGALMGGVFGLSVSFYLYQELDTDAPIYYFCMIIMLVVSYTSSPMV IRLAAELRFAASGIGRIAVSSALITEIGCLVFFNVMVNWKRENHISAGFGCIIITALVILINRYLAVWLNTRNRNQKYLK APELLLILFLLLASSMIIEIWGYNSIISCFIIGLMFPKEGKTARTLVHKLGYSIYNFVLPVYFGYLGLQCDLIYVFRSLN RMANTAILILLSIGSKLGGTLVVCRSLRIPTSEGIFLGFILNTRGYADLLFIGAAAKQIITFDSEAYNVLLVSIVLNTII SGIIVAFLARGEEKMFANNHTAIEPQQMEDELRILACVYDPRQVSAILATVLAMHGTRASPSTTYLMHLIELVKKIKSNL LYHEKENADISDDDDYGGNDVVEINNALDAFTADTAILVHQRRAVSPFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGK LESGKEGIRITNQKVLRHAPCSVGVIVERGLAKVPGFSQLVASEAIQNIATLFFGGPDDREAIAWSLRISKSPRVNLTII RFLLSSSSSSQNEPIESGQSEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGAETVDSLKEIGDMY SLFIVGKGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLMHD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 778 | 778 | 0.0 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 778 | 778 | 0.0 | – | |
| Gene3D | 19 | 417 | 399 | 3.5E-47 | ||
| Phobius | 20 | 38 | 19 | - | – | |
| Pfam | 27 | 409 | 383 | 4.7E-33 | ||
| Phobius | 39 | 49 | 11 | - | – | |
| Phobius | 50 | 69 | 20 | - | – | |
| Phobius | 70 | 74 | 5 | - | – | |
| Phobius | 75 | 95 | 21 | - | – | |
| Phobius | 96 | 106 | 11 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| Phobius | 107 | 129 | 23 | - | – | |
| Phobius | 130 | 140 | 11 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 141 | 165 | 25 | - | – | |
| Phobius | 166 | 176 | 11 | - | – | |
| TMHMM | 173 | 195 | 23 | - | – | |
| Phobius | 177 | 199 | 23 | - | – | |
| Phobius | 200 | 204 | 5 | - | – | |
| TMHMM | 205 | 227 | 23 | - | – | |
| Phobius | 205 | 225 | 21 | - | – | |
| Phobius | 226 | 244 | 19 | - | – | |
| TMHMM | 244 | 274 | 31 | - | – | |
| Phobius | 245 | 274 | 30 | - | – | |
| Phobius | 275 | 293 | 19 | - | – | |
| Phobius | 294 | 316 | 23 | - | – | |
| TMHMM | 294 | 316 | 23 | - | – | |
| Phobius | 317 | 322 | 6 | - | – | |
| Phobius | 323 | 343 | 21 | - | – | |
| Phobius | 344 | 354 | 11 | - | – | |
| Phobius | 355 | 375 | 21 | - | – | |
| Phobius | 376 | 386 | 11 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 387 | 409 | 23 | - | – | |
| Phobius | 410 | 782 | 373 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0055800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…