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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0073600 |
| Transcript ID | LotjaGi3g1v0073600.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribose-phosphate pyrophosphokinase; TAIR: AT2G44530.1 Phosphoribosyltransferase family protein; Swiss-Prot: sp|O64888|KPRS5_ARATH Ribose-phosphate pyrophosphokinase 5, chloroplastic; TrEMBL-Plants: tr|I1JMH3|I1JMH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0073600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8096210..8103926) extracted from Lotus japonicus Gifu genome v1.2.
GCCAAGTCTGCTGCACCCCGTGCATATGAGCCCACCCTCGTGAGGTCCTTAAACAGGGATAGATAGCGAACATCTATATG GATCCTGTACTTGTCAGTGAATAAGGTCATGCCCACGAAGCGTAGCATGAATGCCTTAACAACGAGTTCAAGTCTTTTAT CTTTAATGTTTCTTTTAACCACCTTCATCCAAGAAAAGCTTACAACCTTGCCCCTACACTTCTAAGTCTCCGCCAATACC TTTGTGCTAGTCACATCTAAATGCTCAACCAACGCCATCACATAGTCATCTAAATCTGCATCAGGAAGTGTGAAGAAGTT CCCTCGGATGGGGATGCCGTATAGATGATACGTCATCTAGGGTGATCTTCATCTCACCAAATGACATACGGAAACATGAT GTCTCTAGATGCCACCTCTCAACAAATGCATAAATTAGTCCCTTGCCAATCATGCGAAGTTGCAGTCCACAAGAGGGGCA AGACCCGACCTTTGAACCACCGCAACGATGTAAGGGTCTCCATATCCTTTCCCATAAAACTTCCTCCCAATATTGTACAC CTTCAACACTTCCCCTGTCAACAATCTGTTGTGGTCTAATATAAGAGTTCTGCACCCGCCCAACAATGTGAGTGTCATAG CTCTGCAACAAAGACAAATCCCTCAGACCACTTGGGAATGAAGTCAAGTGTTTGTAAGCCTCATCAAATTGCAGCTTCTG TTGCCGTAGGAGCTGCTGCTACTCCCGGACATCCTCACCGTGTCCACCGCCACCACCCTGTTGCCCGCCATGCACTATAA CATCATCATGACCTCCATAATCGTCATCATCCTCATACTTGTTATTATTGCTCCGGTTCCAAGTCCCCTTCATATTCGTC CTCCTCCTCATGGTCCACCCGAACACCACCACGCTTCTTAATGCTGAGGCGGTCGGAACCCAACAATCTTCAATGGGGGC GAGTGCATAGCGACGTCTGCTACCACGAGTTCTACCCATATCTGTGAACAAAAACAAAGTAAAACAAAATTAGTAAAGCA AATCAATAACATAAAGAAATAAGGTAGGGTTGAGAGAGTGGTGGGGTTTTTTTATAATTCGGGTCTTAGGAAAGAGTCTT GTGGATGAAAAATGGTTGAAGATTATTTATGATTACTATTATTAGAATATATCCGAAAACACGCAATTGTAGTAATCTGT TAGTCTATGAACTCTGAAAAAGTGTCATAATCCTATAGTCTGAACTCTGAACTGAATTTCTCATAACCGCTCTCACTCAC GAGAATCGCGATGTCTACGCTACTTCACTCCTCTTTCACCATCACTTCTTCTTCTTCCTCCTCCTTCTCTCACATCACTC CATTCCTCTCTTCCCCTCGCATCTCACTCCGAAACGGCGTCGTAAGTCACCCACCTTCCCCTTCCCGATTTTGCTTTTGA AAAGCGAACTGTGTTTGTTTTGTTTGATTGTTTGATACTGTATGTGAATTGCGATTGCAGAAATGTAAGGTAATCGGAGC GGTGAGGCTTGACAATGGGAGGCCAAGTCCGGCTGAGTTTGCTGTTAGCAGCGGCGGAAGTGCGATTCCTAGCTTCTTGG TGGCGCCAAACGCGCGCATCCAGGATCTGGTTAACGGAAATGACACTCGCCTTCGAATATTTTCCGGTACCGCTAACCCT GCTCTTGCTCAGGTCAATCCTCAATTCGTGTTTCATCACTCGCTTTTACTTGTTCAATTTTGATTGTAGGCTAATGGTTT GATATCTAATGAAAGCACAAATGAGATGAGCTTAATTAAGTGTATAAGCGATTATTCATAAGCTAATTTGAGAAATTTGT CGAAATGAGCTTAAAATAGGTTATAAATGTTATTCATTAGCTGATATGAAGAACTTATGAAAATATAAATTATACTAGGT TATAAGCTATTTACATAAGCTCTTCTAAACACTTGAATAATCGCTTATGCTATATGATAAGCTCAAATATAATATGCTGA CAGTATAATACATCTAATTATGTTTTACTATTTATCACATCGTAATTAAATTAGAATTAAGAGAGAGTTTAATTAATATG CACTCACTTGCAGTCTGATTAGTTTTACAGTTTACAGAGATTCAATCACATTTCTACATTTTCCTTTTTTATTCATTATC AATTTTAATTGAATTGAGTTATAATGTGGAAAAATTGTGAATTCTAATTGGATGATTGTGTTACACTATTAGGGTATAGT TATCAAACTCTTTAAAAGAACTAAAAAGCCACGATGGTTAGATATGATTAGACGTCTGTGTAAAACTACTAGTGATGTAT TGTAAGTGAAATGTCTGATTTGTATGTAGTCATGTACTTTAATAGGATATTGGTTGCTACATGTACCTGGAGCTTTCCTT TCTGAAAATATTGGTGAAAACATATCATCTGAAAATGAAATCCGAAAAATAAGCAAAACAGCATATTTTCCATTTCATTT TCATTTCTCTTTTTTTTATACAAAGAGGAAATAATGTTTTGGTCCTTATGGAAAGCATATTGTACTTTTTGAACATACTT TGATTGTTAAGTGTTGACTAATATCTGAAATCTTATATTATGCACCAAGTAGCCTTTAATTATTTACTGAAATGTCTGAT TAACTTTTACTTAAATAGGAAATTGCATGCTACATGGGACTGGAGCTTGGAAAAATAAAGATAAAACGTTTTGCTGATGG TGAGATATACGTTCAGCTGCAAGAAAGTGTCAGAGGTTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCCAATG AAAATCTTATGGAGCTGCTAATAATGATCGATGCCTGCAGGAGAGCTTCAGCCAAAAATATTACAGCAGTCATTCCCTAT TTTGGATATGCTAGAGCTGATAGAAAGGTCTGCTTGTCAGTTTGATTACATATTCATTATATTTTTGTTACTTGTGATTG TGATGACATTTTATGCTTCTTCAAATTCCACCATATTTTTCTTGTGTTACATGCGTATTGTGATTTTGCTACTATTTTGC ACATATGTGGCCCATATGGATACAATTATCTGCAAACCAGTGCCATTTTCCCCGAAAACATAGGATGCAGTTAAGATTGA GAAGATAGAACATATTACATAACAATATTTAAGAGAGATTTGAATATGTAAAACTTATTACATGCTACATAATCATCTGT GAAGCTATTTATCCCTTGAATATGACACATTGTCTTAATTATTGCATTTGGTAGCATCTGCACTGATAACCACCTCCCTT GGCATTATTTTCTTTGACTCTTTCTGTCAATCACGAACTCTCCCAAAAGCTTAACTTATTTGGTGAAGACTTATACATAA CACTTTCCTTTGATAGTTGATGAGAAATTACGCAAAATATACACTTGTGACTGTATCTTCCAGAACCACAATAAGGGAAA AAGTTTACAAAATACATTCCAATGAGTATCAGTATGACAGTGTAAGACATACATGTAATAAGGATGTACAAGCAACTCTT GCTTTGGATATCTGCGTATCATAGTTTGGATATAAAGATGATGGATGATATTGAAGTCATTAACAACATAAATTTTTAGC CCTAAAAGTTGCTACCTAATGTTACTTGCACATTGCTACATAAAAGTTATTTCACAGCCAATGTTGATGATATTAACTGA AAATATCTGACATTCTAGTTTAGTTTAGATTAAATATGATCTGCAACTACTCTTGCAGACTCAAGGGCGTGAATCCATTG CTGCCAAGCTTGTAGCAAATTTGATTACTGAAGCAGGTGCAAATCGTGTTCTTGCTTGTGACCTCCATTCTGGGCAGTCC ATGGGCTACTTTGATATTCCAGTTGATCATGTGTATGGACAGGTAACGGAAAACAGTACTTGGGTGTGTCACTAGTGTAA ACTAGCGTGGAAAATTAAAAAGCATATGTGTTCTATTAAACATAAACAAACATGTGATATGTTATCTATTTGTAATAATT TACTGCAAAAGAGTGTGTTGTTAGCATTTCTCGTAAATAAGTGTTGATCTTGATGCTATTTGATGATGATTGTGATTAGT GGTGGTAATGAGAATTGTCTGGCTTCTTCTGCAATATCATGTCTACAAGATATTCATTAAAGTCTAAACTTGGATGTCTC TTGAAAAGACGGATTTGTTAATTATACGGTTAACAAATTGATATTCTCAAAGGATTTTGGTAATCTGCCCCTATAGATAT GATGGGTGTGAGAGCATTTTCATAAATTTATTATTTTTGTAATCTCCATGGTCGAGATGTCTAGTCCTGGGTGTGAGGGG TGTGTTAGGGTCACGTTGACTAGAGATATGGCTGAAAAGTCTTTGTAAAGGTTACGACAATACAAGGTTTTGGACTTTTG GGGTAGAGTTAGGCCTAGCCTAAATTCTCTATATACGATAATATATGATTTAGCATTACAAATGGTACCTGCCATTTTCT GTAACAATATTTGAGATCTCCTAATGATTTATACAGTTTGCGTTGAATTATATTTTTATGAATTTTGCAGAAGTTCTTAC ATTGAAACTGTCAGTGTAATTTGGTTCAGTGATTAATCATTTACTCTTTTTTTGTCACTACCAGCCTGTTATACTTGATT ACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCTAGAGCACGTGCT TTCGCCAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTATGATC TCTGCTCTTCTTAAGTTTGAGTTTAGATATCCTGATTTAGATTAGTTGCCAGCAGGGTTAGGGATGGTTCAACCTAATTT GATTACCATAATGGTTCTGCAGTATAAAATGTATAATCCAAATTGGTAACAAGGATTGCTCATTGTTTATATGGAACTCT GATTTGGGTGTTAAAACTAGTCTAGAAGGATAGCTCATTGTTTATATGGTTGGTCTGGTAACTCTGATTTGGGTGTTCAA ACTAGTCTAAACTACTAACAGGGATAGCCCATTGTTTATATGGTTGGTCAGGTAACTCTGATTTGGGAGTTAAAACTAGT CTATGACCACTGAGGGGTGACCATTGAGCACAGTTGTTCCCTTAATATAAAGCATTTTATATTTATAGTCATAAATGAAG CACCTTTTGCTATCTGATTGGGTGAATCTCACATTTCAGGTGATGAATTTGATAGGTGATGTGAAGGGAAAGGTAGCAGT TATGGTAGATGACATGATTGATACTGCTGGTGAGTTCATGTGTAAAACTCTTAATGTGCTAGTGCAATAATGGTAGTTTG TCTCTGACCCTATATTCAGTTAGATTAGTGCCTCAACCTCAAAACTCGCATGTTATGTCTCTCTCTCTCTCTCTCTCAAT TGGTTTCAATTTTTTTTCTTGGTAAATAGTACAGCATTTCTGCTTAATCATACACGAAGTGATGATATATGGTGTAGAAA AACTGGCAAACTGTATGATTATAGGTTAAAAAGGAATCTTTATTTACTTCAACAAAGAGACAGTTTTATGTTTAAGAAGT AAAGTTGTTGGTCTCTTTTGCTTGGTCTTCAATCACTTCTGATAAAAAAAAAATATACTTTACATACATATCTTTCTTAT TGGTGCTATTTTTGAGTTCTTAACTCCTTAACTGTCAAAGTTACTTACAACAGAACAGTGTATAATATTTGATTTTTTGT TAATATGCAAATCTAAATTAATTAGGTCCTCATCCTCTGATAATTAGAACTTATGATAGAATTGGACCAGAAACTGAGAG GAAAGAAATGTCCTCTTATGGAAAAAGACTGAAAATGGGTATACAAGGTGCTGGCATTCAAGAGGCTAGTACTCTCCCAC AACTTAATTACTTTCCAGATAACGTCCCTAACAACTTCCTCATTCTTCTTATAGGAATGCTAACTAACAATTGTTTCAAC AACCTAACTAACAGTTAGAATGGCCTATTAATTCAGGCCCAAACTAACAACTAAGTGAAATAATCAAGTGATATTTAAAA GTCTATGCCCAAACTCTTGTACATGATGAGGAGGAGAAAATTAAGTGAAATAATCAAGTGATATTTAAAAGTAAATAATC AATCTGTAAAATAATCTAACTCAATGCATGACATAACATTATGGCTAGACTGACGCATGACTAGACACCACCTAGTTGGA AAAAGGCTTGGTTGTTATTTTGTTTCTGTATTACTAGCTAAGTGGGGGAACATAGCACTTGAAAAAAAAATCAATGTCCT AATTAATTGACTTTTTATAGGAACTATTAGCAAAGGTGCAGCTCTATTGCATCAAGAAGGTGCTAGAGAAGTCTATGCAT GCACTACTCATGCTGTTTTCAGGTATACATTGGGCTTTAAATTCTGTAATAATTTATTTCAACTTTGGTTTGCACTGAGG CACTTTAACCACGTCAATTATGGTGAATCTGCTACTGAAGCCAATTGCAATCAGATTTTTCTCTGTGAAGTTTTAATTCA GCTCTCTGTTCATTATTTTAGCATATTTAAGGGAAAAGAAATCAGTAGGCAGTAGGCACTAGTTCTTGCTGTATGAACTA TTGTTTTGAGAATGAACACATTTTCTTCCTACATTCTGATCCGGTTGCAATGATGGTTAATACATATTTGTCTTACTCAT GACTTGTGCATCATTCTTGCCTTTGCAGTCCTCCTGCTATAGAGAGGTTGTCAAGCGGTTTGTTTCAAGAAGTTATCATT ACAAATACAATTCCAGTGGCGGAACAGAACTATTTCCCCCAACTAACTGTCCTATCAGTGGCCAACCTTCTGGGAGAGAC TATATGGCGTGTTCATGATGACTGCTCAGTGAGTAGCATATTTCAGTAAAATTAGTTGGTTATTTTTCATTCTGCTTATA GAAAAAGTTCAAAATGTCTGAGTACAATTGAGACCACTGATTGCATCCATATATAAATCAATTTTTTCAAATAACTTAAT TGGAAAACATTGAGTGTGCAGTAAGGAATTGATTCTTTCAATTGATCAATAAATTGTTATTTAATTGCATGCCTGGCGCT TTAATTTGACTTCCATTTATCAAGTGGTATGTTACCCCTTTTTATTTTCATTGAACTTTTTATTTTCACTTGAGCTAGAA TTTTTTCTAGTTTTGTTTATTATGGGATGGAGTAGTGACAAAAATAGATTTATCTTGCAACTGTTCTCTTTTTTTCCCCT TTTTCTTTTATCTTTGTCAGGGTGGAATTGAACCTTATTCCAGCTTGGGCATTGATTGAACAATTTGTATCCATGTTATG GTGGTTACAGCTTATGACGCTGCGGTAACAAGTGACAGATTGTAAAAGCGATTTAAAGCAAAAGCTTTACTTGAAGAATA CCTTCTTCTAGAGAGATGTTTCATGGAGTTTTTTGTACGTGTAAAATACTATCATAGGTATATGTGAAATTAACAACGGA AAACTGTGCCTCTATGCTGTTCTTTTTTCTTGAGTACGTACAGTTTTGAAGTAGAAACTAGAAATGGTGAATCATACTGC ATGAAGAGTAATGAATTGTGTAAACTATATTACTGCCACTTTATTGATTGTCCTAGTGTATTCAAAGGGAACATTCTATT CAAAATCAAAAGTATGCATAGTTTATGCTGGCCTAAA
CDS sequence (LotjaGi3g1v0073600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTACGCTACTTCACTCCTCTTTCACCATCACTTCTTCTTCTTCCTCCTCCTTCTCTCACATCACTCCATTCCTCTC TTCCCCTCGCATCTCACTCCGAAACGGCGTCAAATGTAAGGTAATCGGAGCGGTGAGGCTTGACAATGGGAGGCCAAGTC CGGCTGAGTTTGCTGTTAGCAGCGGCGGAAGTGCGATTCCTAGCTTCTTGGTGGCGCCAAACGCGCGCATCCAGGATCTG GTTAACGGAAATGACACTCGCCTTCGAATATTTTCCGGTACCGCTAACCCTGCTCTTGCTCAGGAAATTGCATGCTACAT GGGACTGGAGCTTGGAAAAATAAAGATAAAACGTTTTGCTGATGGTGAGATATACGTTCAGCTGCAAGAAAGTGTCAGAG GTTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCCAATGAAAATCTTATGGAGCTGCTAATAATGATCGATGCC TGCAGGAGAGCTTCAGCCAAAAATATTACAGCAGTCATTCCCTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGG GCGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTGATTACTGAAGCAGGTGCAAATCGTGTTCTTGCTTGTGACCTCC ATTCTGGGCAGTCCATGGGCTACTTTGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTTGATTACCTTGCC AGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCTAGAGCACGTGCTTTCGCCAA AAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTGATGAATTTGATAG GTGATGTGAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGAACTATTAGCAAAGGTGCAGCTCTA TTGCATCAAGAAGGTGCTAGAGAAGTCTATGCATGCACTACTCATGCTGTTTTCAGTCCTCCTGCTATAGAGAGGTTGTC AAGCGGTTTGTTTCAAGAAGTTATCATTACAAATACAATTCCAGTGGCGGAACAGAACTATTTCCCCCAACTAACTGTCC TATCAGTGGCCAACCTTCTGGGAGAGACTATATGGCGTGTTCATGATGACTGCTCAGGTGGAATTGAACCTTATTCCAGC TTGGGCATTGATTGA
Protein sequence (LotjaGi3g1v0073600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTLLHSSFTITSSSSSSFSHITPFLSSPRISLRNGVKCKVIGAVRLDNGRPSPAEFAVSSGGSAIPSFLVAPNARIQDL VNGNDTRLRIFSGTANPALAQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDA CRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLA SKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTISKGAAL LHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSGGIEPYSS LGID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 12 | 9 | - | – | |
| Phobius | 13 | 20 | 8 | - | – | |
| Phobius | 21 | 404 | 384 | - | – | |
| PANTHER | 75 | 392 | 318 | 1.1E-215 | – | |
| PANTHER | 75 | 392 | 318 | 1.1E-215 | ||
| Pfam | 88 | 204 | 117 | 3.2E-50 | ||
| Hamap | 88 | 398 | 311 | 47.12 | ||
| SMART | 88 | 204 | 117 | 2.8E-81 | – | |
| TIGRFAM | 89 | 391 | 303 | 1.1E-119 | ||
| Gene3D | 91 | 385 | 295 | 3.7E-122 | ||
| SUPERFAMILY | 153 | 389 | 237 | 2.38E-61 | ||
| ProSitePatterns | 212 | 227 | 16 | - | ||
| Gene3D | 231 | 374 | 144 | 3.7E-122 | ||
| CDD | 247 | 359 | 113 | 1.19639E-23 | ||
| Pfam | 290 | 392 | 103 | 1.4E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Ribose phosphate diphosphokinase activity | Catalysis of the reaction: D-ribose 5-phosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + 2 H(+). | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Biological process | Ribonucleoside monophosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar. | ||
| Biological process | Nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates). | ||
| Biological process | Cellular biosynthetic process | The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells. |
Expression pattern of LotjaGi3g1v0073600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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