Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0073600 |
| Transcript ID | LotjaGi3g1v0073600.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribose-phosphate pyrophosphokinase; TAIR: AT2G44530.1 Phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9XG98|KPRS1_SPIOL Ribose-phosphate pyrophosphokinase 1; TrEMBL-Plants: tr|I1JMH5|I1JMH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0073600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8096927..8102636) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCTACGCTACTTCACTCCTCTTTCACCATCACTTCTTCTTCTTCCTCCTCCTTCTCTCACATCACTCCATTCCTCTC TTCCCCTCGCATCTCACTCCGAAACGGCGTCGTAAGTCACCCACCTTCCCCTTCCCGATTTTGCTTTTGAAAAGCGAACT GTGTTTGTTTTGTTTGATTGTTTGATACTGTATGTGAATTGCGATTGCAGAAATGTAAGGTAATCGGAGCGGTGAGGCTT GACAATGGGAGGCCAAGTCCGGCTGAGTTTGCTGTTAGCAGCGGCGGAAGTGCGATTCCTAGCTTCTTGGTGGCGCCAAA CGCGCGCATCCAGGATCTGGTTAACGGAAATGACACTCGCCTTCGAATATTTTCCGGTACCGCTAACCCTGCTCTTGCTC AGGTCAATCCTCAATTCGTGTTTCATCACTCGCTTTTACTTGTTCAATTTTGATTGTAGGCTAATGGTTTGATATCTAAT GAAAGCACAAATGAGATGAGCTTAATTAAGTGTATAAGCGATTATTCATAAGCTAATTTGAGAAATTTGTCGAAATGAGC TTAAAATAGGTTATAAATGTTATTCATTAGCTGATATGAAGAACTTATGAAAATATAAATTATACTAGGTTATAAGCTAT TTACATAAGCTCTTCTAAACACTTGAATAATCGCTTATGCTATATGATAAGCTCAAATATAATATGCTGACAGTATAATA CATCTAATTATGTTTTACTATTTATCACATCGTAATTAAATTAGAATTAAGAGAGAGTTTAATTAATATGCACTCACTTG CAGTCTGATTAGTTTTACAGTTTACAGAGATTCAATCACATTTCTACATTTTCCTTTTTTATTCATTATCAATTTTAATT GAATTGAGTTATAATGTGGAAAAATTGTGAATTCTAATTGGATGATTGTGTTACACTATTAGGGTATAGTTATCAAACTC TTTAAAAGAACTAAAAAGCCACGATGGTTAGATATGATTAGACGTCTGTGTAAAACTACTAGTGATGTATTGTAAGTGAA ATGTCTGATTTGTATGTAGTCATGTACTTTAATAGGATATTGGTTGCTACATGTACCTGGAGCTTTCCTTTCTGAAAATA TTGGTGAAAACATATCATCTGAAAATGAAATCCGAAAAATAAGCAAAACAGCATATTTTCCATTTCATTTTCATTTCTCT TTTTTTTATACAAAGAGGAAATAATGTTTTGGTCCTTATGGAAAGCATATTGTACTTTTTGAACATACTTTGATTGTTAA GTGTTGACTAATATCTGAAATCTTATATTATGCACCAAGTAGCCTTTAATTATTTACTGAAATGTCTGATTAACTTTTAC TTAAATAGGAAATTGCATGCTACATGGGACTGGAGCTTGGAAAAATAAAGATAAAACGTTTTGCTGATGGTGAGATATAC GTTCAGCTGCAAGAAAGTGTCAGAGGTTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCCAATGAAAATCTTAT GGAGCTGCTAATAATGATCGATGCCTGCAGGAGAGCTTCAGCCAAAAATATTACAGCAGTCATTCCCTATTTTGGATATG CTAGAGCTGATAGAAAGGTCTGCTTGTCAGTTTGATTACATATTCATTATATTTTTGTTACTTGTGATTGTGATGACATT TTATGCTTCTTCAAATTCCACCATATTTTTCTTGTGTTACATGCGTATTGTGATTTTGCTACTATTTTGCACATATGTGG CCCATATGGATACAATTATCTGCAAACCAGTGCCATTTTCCCCGAAAACATAGGATGCAGTTAAGATTGAGAAGATAGAA CATATTACATAACAATATTTAAGAGAGATTTGAATATGTAAAACTTATTACATGCTACATAATCATCTGTGAAGCTATTT ATCCCTTGAATATGACACATTGTCTTAATTATTGCATTTGGTAGCATCTGCACTGATAACCACCTCCCTTGGCATTATTT TCTTTGACTCTTTCTGTCAATCACGAACTCTCCCAAAAGCTTAACTTATTTGGTGAAGACTTATACATAACACTTTCCTT TGATAGTTGATGAGAAATTACGCAAAATATACACTTGTGACTGTATCTTCCAGAACCACAATAAGGGAAAAAGTTTACAA AATACATTCCAATGAGTATCAGTATGACAGTGTAAGACATACATGTAATAAGGATGTACAAGCAACTCTTGCTTTGGATA TCTGCGTATCATAGTTTGGATATAAAGATGATGGATGATATTGAAGTCATTAACAACATAAATTTTTAGCCCTAAAAGTT GCTACCTAATGTTACTTGCACATTGCTACATAAAAGTTATTTCACAGCCAATGTTGATGATATTAACTGAAAATATCTGA CATTCTAGTTTAGTTTAGATTAAATATGATCTGCAACTACTCTTGCAGACTCAAGGGCGTGAATCCATTGCTGCCAAGCT TGTAGCAAATTTGATTACTGAAGCAGGTGCAAATCGTGTTCTTGCTTGTGACCTCCATTCTGGGCAGTCCATGGGCTACT TTGATATTCCAGTTGATCATGTGTATGGACAGGTAACGGAAAACAGTACTTGGGTGTGTCACTAGTGTAAACTAGCGTGG AAAATTAAAAAGCATATGTGTTCTATTAAACATAAACAAACATGTGATATGTTATCTATTTGTAATAATTTACTGCAAAA GAGTGTGTTGTTAGCATTTCTCGTAAATAAGTGTTGATCTTGATGCTATTTGATGATGATTGTGATTAGTGGTGGTAATG AGAATTGTCTGGCTTCTTCTGCAATATCATGTCTACAAGATATTCATTAAAGTCTAAACTTGGATGTCTCTTGAAAAGAC GGATTTGTTAATTATACGGTTAACAAATTGATATTCTCAAAGGATTTTGGTAATCTGCCCCTATAGATATGATGGGTGTG AGAGCATTTTCATAAATTTATTATTTTTGTAATCTCCATGGTCGAGATGTCTAGTCCTGGGTGTGAGGGGTGTGTTAGGG TCACGTTGACTAGAGATATGGCTGAAAAGTCTTTGTAAAGGTTACGACAATACAAGGTTTTGGACTTTTGGGGTAGAGTT AGGCCTAGCCTAAATTCTCTATATACGATAATATATGATTTAGCATTACAAATGGTACCTGCCATTTTCTGTAACAATAT TTGAGATCTCCTAATGATTTATACAGTTTGCGTTGAATTATATTTTTATGAATTTTGCAGAAGTTCTTACATTGAAACTG TCAGTGTAATTTGGTTCAGTGATTAATCATTTACTCTTTTTTTGTCACTACCAGCCTGTTATACTTGATTACCTTGCCAG CAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCTAGAGCACGTGCTTTCGCCAAAA AATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTATGATCTCTGCTCTTC TTAAGTTTGAGTTTAGATATCCTGATTTAGATTAGTTGCCAGCAGGGTTAGGGATGGTTCAACCTAATTTGATTACCATA ATGGTTCTGCAGTATAAAATGTATAATCCAAATTGGTAACAAGGATTGCTCATTGTTTATATGGAACTCTGATTTGGGTG TTAAAACTAGTCTAGAAGGATAGCTCATTGTTTATATGGTTGGTCTGGTAACTCTGATTTGGGTGTTCAAACTAGTCTAA ACTACTAACAGGGATAGCCCATTGTTTATATGGTTGGTCAGGTAACTCTGATTTGGGAGTTAAAACTAGTCTATGACCAC TGAGGGGTGACCATTGAGCACAGTTGTTCCCTTAATATAAAGCATTTTATATTTATAGTCATAAATGAAGCACCTTTTGC TATCTGATTGGGTGAATCTCACATTTCAGGTGATGAATTTGATAGGTGATGTGAAGGGAAAGGTAGCAGTTATGGTAGAT GACATGATTGATACTGCTGGTGAGTTCATGTGTAAAACTCTTAATGTGCTAGTGCAATAATGGTAGTTTGTCTCTGACCC TATATTCAGTTAGATTAGTGCCTCAACCTCAAAACTCGCATGTTATGTCTCTCTCTCTCTCTCTCTCAATTGGTTTCAAT TTTTTTTCTTGGTAAATAGTACAGCATTTCTGCTTAATCATACACGAAGTGATGATATATGGTGTAGAAAAACTGGCAAA CTGTATGATTATAGGTTAAAAAGGAATCTTTATTTACTTCAACAAAGAGACAGTTTTATGTTTAAGAAGTAAAGTTGTTG GTCTCTTTTGCTTGGTCTTCAATCACTTCTGATAAAAAAAAAATATACTTTACATACATATCTTTCTTATTGGTGCTATT TTTGAGTTCTTAACTCCTTAACTGTCAAAGTTACTTACAACAGAACAGTGTATAATATTTGATTTTTTGTTAATATGCAA ATCTAAATTAATTAGGTCCTCATCCTCTGATAATTAGAACTTATGATAGAATTGGACCAGAAACTGAGAGGAAAGAAATG TCCTCTTATGGAAAAAGACTGAAAATGGGTATACAAGGTGCTGGCATTCAAGAGGCTAGTACTCTCCCACAACTTAATTA CTTTCCAGATAACGTCCCTAACAACTTCCTCATTCTTCTTATAGGAATGCTAACTAACAATTGTTTCAACAACCTAACTA ACAGTTAGAATGGCCTATTAATTCAGGCCCAAACTAACAACTAAGTGAAATAATCAAGTGATATTTAAAAGTCTATGCCC AAACTCTTGTACATGATGAGGAGGAGAAAATTAAGTGAAATAATCAAGTGATATTTAAAAGTAAATAATCAATCTGTAAA ATAATCTAACTCAATGCATGACATAACATTATGGCTAGACTGACGCATGACTAGACACCACCTAGTTGGAAAAAGGCTTG GTTGTTATTTTGTTTCTGTATTACTAGCTAAGTGGGGGAACATAGCACTTGAAAAAAAAATCAATGTCCTAATTAATTGA CTTTTTATAGGAACTATTAGCAAAGGTGCAGCTCTATTGCATCAAGAAGGTGCTAGAGAAGTCTATGCATGCACTACTCA TGCTGTTTTCAGGTATACATTGGGCTTTAAATTCTGTAATAATTTATTTCAACTTTGGTTTGCACTGAGGCACTTTAACC ACGTCAATTATGGTGAATCTGCTACTGAAGCCAATTGCAATCAGATTTTTCTCTGTGAAGTTTTAATTCAGCTCTCTGTT CATTATTTTAGCATATTTAAGGGAAAAGAAATCAGTAGGCAGTAGGCACTAGTTCTTGCTGTATGAACTATTGTTTTGAG AATGAACACATTTTCTTCCTACATTCTGATCCGGTTGCAATGATGGTTAATACATATTTGTCTTACTCATGACTTGTGCA TCATTCTTGCCTTTGCAGTCCTCCTGCTATAGAGAGGTTGTCAAGCGGTTTGTTTCAAGAAGTTATCATTACAAATACAA TTCCAGTGGCGGAACAGAACTATTTCCCCCAACTAACTGTCCTATCAGTGGCCAACCTTCTGGGAGAGACTATATGGCGT GTTCATGATGACTGCTCAGTGAGTAGCATATTTCAGTAAAATTAGTTGGTTATTTTTCATTCTGCTTATAGAAAAAGTTC AAAATGTCTGAGTACAATTGAGACCACTGA
CDS sequence (LotjaGi3g1v0073600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTACGCTACTTCACTCCTCTTTCACCATCACTTCTTCTTCTTCCTCCTCCTTCTCTCACATCACTCCATTCCTCTC TTCCCCTCGCATCTCACTCCGAAACGGCGTCAAATGTAAGGTAATCGGAGCGGTGAGGCTTGACAATGGGAGGCCAAGTC CGGCTGAGTTTGCTGTTAGCAGCGGCGGAAGTGCGATTCCTAGCTTCTTGGTGGCGCCAAACGCGCGCATCCAGGATCTG GTTAACGGAAATGACACTCGCCTTCGAATATTTTCCGGTACCGCTAACCCTGCTCTTGCTCAGGAAATTGCATGCTACAT GGGACTGGAGCTTGGAAAAATAAAGATAAAACGTTTTGCTGATGGTGAGATATACGTTCAGCTGCAAGAAAGTGTCAGAG GTTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCCAATGAAAATCTTATGGAGCTGCTAATAATGATCGATGCC TGCAGGAGAGCTTCAGCCAAAAATATTACAGCAGTCATTCCCTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGG GCGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTGATTACTGAAGCAGGTGCAAATCGTGTTCTTGCTTGTGACCTCC ATTCTGGGCAGTCCATGGGCTACTTTGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTTGATTACCTTGCC AGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCTAGAGCACGTGCTTTCGCCAA AAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTGATGAATTTGATAG GTGATGTGAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGAACTATTAGCAAAGGTGCAGCTCTA TTGCATCAAGAAGGTGCTAGAGAAGTCTATGCATGCACTACTCATGCTGTTTTCAGTCCTCCTGCTATAGAGAGGTTGTC AAGCGGTTTGTTTCAAGAAGTTATCATTACAAATACAATTCCAGTGGCGGAACAGAACTATTTCCCCCAACTAACTGTCC TATCAGTGGCCAACCTTCTGGGAGAGACTATATGGCGTGTTCATGATGACTGCTCAAAAAAGTTCAAAATGTCTGAGTAC AATTGA
Protein sequence (LotjaGi3g1v0073600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTLLHSSFTITSSSSSSFSHITPFLSSPRISLRNGVKCKVIGAVRLDNGRPSPAEFAVSSGGSAIPSFLVAPNARIQDL VNGNDTRLRIFSGTANPALAQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDA CRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLA SKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTISKGAAL LHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSKKFKMSEY N
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 12 | 9 | - | – | |
| Phobius | 13 | 20 | 8 | - | – | |
| Phobius | 21 | 401 | 381 | - | – | |
| PANTHER | 75 | 392 | 318 | 1.0E-215 | – | |
| PANTHER | 75 | 392 | 318 | 1.0E-215 | ||
| Pfam | 88 | 204 | 117 | 3.1E-50 | ||
| Hamap | 88 | 398 | 311 | 47.346 | ||
| SMART | 88 | 204 | 117 | 2.8E-81 | – | |
| TIGRFAM | 89 | 392 | 304 | 9.2E-120 | ||
| Gene3D | 91 | 385 | 295 | 3.7E-122 | ||
| SUPERFAMILY | 153 | 389 | 237 | 2.26E-61 | ||
| ProSitePatterns | 212 | 227 | 16 | - | ||
| Gene3D | 231 | 374 | 144 | 3.7E-122 | ||
| CDD | 247 | 359 | 113 | 5.64923E-24 | ||
| Pfam | 289 | 392 | 104 | 1.1E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Ribose phosphate diphosphokinase activity | Catalysis of the reaction: D-ribose 5-phosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + 2 H(+). | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Biological process | Ribonucleoside monophosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar. | ||
| Biological process | Nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates). | ||
| Biological process | Cellular biosynthetic process | The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells. |
Expression pattern of LotjaGi3g1v0073600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…